Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,362,298 T→C Q108R (CAG→CGG)  dsbD ← thiol:disulfide interchange protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,362,2980TC99.7% 978.0 / NA 285Q108R (CAG→CGG) dsbDthiol:disulfide interchange protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (143/141);  minor base G (0/1);  total (143/142)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 292 total aligned reads displayed.

AACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGC  >  NC_000913/4362208‑4362387
                                                                                          |                                                                                         
aacggaacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCgg                                                                                         >  2:263119/1‑93 (MQ=255)
 acggaacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTTCCGCACTCGCCCGGt                                                                                        >  1:4463712/1‑93 (MQ=255)
 acggaacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGt                                                                                        >  1:844528/1‑93 (MQ=255)
 acggaacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGt                                                                                        <  2:5831623/93‑1 (MQ=255)
  cggaacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGtt                                                                                       >  1:4225445/1‑93 (MQ=255)
    gaacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGa                                                                                     >  2:3872923/1‑93 (MQ=255)
     aacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGAt                                                                                    <  2:5057051/93‑1 (MQ=255)
     aacggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGAt                                                                                    >  2:2007535/1‑93 (MQ=255)
      acggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATg                                                                                   >  2:717115/1‑93 (MQ=255)
      acggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATg                                                                                   >  2:5741954/1‑93 (MQ=255)
       cggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATgg                                                                                  <  2:6258751/93‑1 (MQ=255)
       cggTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATgg                                                                                  <  1:2254362/93‑1 (MQ=255)
         gTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTg                                                                                <  2:6411677/93‑1 (MQ=255)
         gTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTg                                                                                <  1:817881/93‑1 (MQ=255)
         gTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTg                                                                                >  1:5837019/1‑93 (MQ=255)
          ttttGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGa                                                                               >  1:216182/1‑93 (MQ=255)
             tGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACgg                                                                            >  1:5367008/1‑93 (MQ=255)
             tGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACgg                                                                            >  2:2835554/1‑93 (MQ=255)
              ggTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACggg                                                                           >  2:4344180/1‑93 (MQ=255)
               gTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGa                                                                          >  1:5347440/1‑93 (MQ=255)
                tttCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGaa                                                                         <  2:1489358/93‑1 (MQ=255)
                tttCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATAGTGACGGGaa                                                                         <  1:951434/93‑1 (MQ=255)
                  tCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGc                                                                       >  1:6152876/1‑93 (MQ=255)
                    tGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGt                                                                     >  2:5433948/1‑93 (MQ=255)
                        ggATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGc                                                                 <  2:2389993/93‑1 (MQ=255)
                        ggATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGc                                                                 >  1:5503889/1‑93 (MQ=255)
                         gATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGcc                                                                >  2:6368539/1‑93 (MQ=255)
                         gATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGcc                                                                >  1:2327821/1‑93 (MQ=255)
                         gATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGcc                                                                >  2:1020494/1‑93 (MQ=255)
                          aTAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCg                                                               <  2:5686662/93‑1 (MQ=255)
                            aaCAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGAt                                                             <  1:5619196/93‑1 (MQ=255)
                             aCAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATc                                                            <  1:3098810/93‑1 (MQ=255)
                             aCAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATc                                                            >  1:6374631/1‑93 (MQ=255)
                               aGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATcgc                                                          <  2:2540763/93‑1 (MQ=255)
                                 aaaCCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCgg                                                        >  1:3907808/1‑93 (MQ=255)
                                 aaaCCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCgg                                                        >  1:4651815/1‑93 (MQ=255)
                                  aaCCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGt                                                       <  1:4137797/93‑1 (MQ=255)
                                  aaCCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGt                                                       >  2:12658/1‑93 (MQ=255)
                                   aCCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTa                                                      >  2:3593773/1‑93 (MQ=255)
                                    ccGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTaa                                                     <  1:1342013/93‑1 (MQ=255)
                                       gCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAAtc                                                  <  1:5299253/93‑1 (MQ=255)
                                        cATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCCCTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAAtct                                                 <  2:2505260/93‑1 (MQ=255)
                                        cATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAAtct                                                 <  2:2435396/93‑1 (MQ=255)
                                        cATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAAtct                                                 <  2:4564261/93‑1 (MQ=255)
                                         aTCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAAtctc                                                <  1:1478428/93‑1 (MQ=255)
                                              cacaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCttt                                           <  2:1630153/93‑1 (MQ=255)
                                              cacaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCttt                                           <  2:2800509/93‑1 (MQ=255)
                                              cacaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCttt                                           <  2:5985109/93‑1 (MQ=255)
                                               acaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCCCTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtttt                                          <  2:3195154/93‑1 (MQ=255)
                                               acaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtttt                                          <  1:4053811/93‑1 (MQ=255)
                                               acaGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCtttt                                          <  2:3009006/93‑1 (MQ=255)
                                                  gCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTgtc                                       >  1:5987450/1‑91 (MQ=255)
                                                  gCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGcc                                       >  1:623518/1‑93 (MQ=255)
                                                  gCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGcc                                       >  1:2012510/1‑93 (MQ=255)
                                                  gCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGACGANCGCGGTAAATCTCGCNTTTNcc                                       >  2:1376037/1‑93 (MQ=255)
                                                  gCCCTAGTAGGTGACAGTAAACAACGCACCCGCACTCACCAGGTTGTTGATGACGGGAAGCGTCAGCCGATCACGGTAAATCTCGCTTTTGcc                                       <  1:6470742/93‑1 (MQ=255)
                                                   cccTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCg                                      <  2:2349185/93‑1 (MQ=255)
                                                    ccTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGt                                     >  1:5032402/1‑93 (MQ=255)
                                                    ccTGGTAGGTGACAGTTAACGTCGCCCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGt                                     <  1:548068/93‑1 (MQ=255)
                                                     cTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTa                                    >  1:5535503/1‑93 (MQ=255)
                                                     cTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTa                                    >  1:2867457/1‑93 (MQ=255)
                                                       ggTAGGTGACAGTTAACGTCGCTCCCGCGCTCGCCGGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTaaa                                  <  2:2683060/93‑1 (MQ=255)
                                                        gTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTaaaa                                 >  2:4692254/1‑93 (MQ=255)
                                                         tAGGTGCCAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAAc                                <  1:4742401/93‑1 (MQ=255)
                                                         tAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAAc                                >  1:3408215/1‑93 (MQ=255)
                                                         tAGGTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAAc                                <  2:1866335/93‑1 (MQ=255)
                                                           ggTGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTc                              <  1:79037/93‑1 (MQ=255)
                                                             tGACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCAt                            >  1:1540701/1‑93 (MQ=255)
                                                              gACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATc                           <  1:2569505/93‑1 (MQ=255)
                                                              gACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATc                           >  1:1310480/1‑93 (MQ=255)
                                                              gACAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATc                           <  1:1232108/93‑1 (MQ=255)
                                                               aCAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCt                          <  1:2703030/93‑1 (MQ=255)
                                                                cAGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCtt                         >  2:6239740/1‑93 (MQ=255)
                                                                 aGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTc                        >  1:2757327/1‑93 (MQ=255)
                                                                 aGTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTc                        <  1:3671160/93‑1 (MQ=255)
                                                                  gTTAACGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCa                       >  1:163475/1‑93 (MQ=255)
                                                                      aCGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGcc                   <  1:5418564/93‑1 (MQ=255)
                                                                      aCGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGcc                   <  1:5136393/93‑1 (MQ=255)
                                                                       cGTCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCa                  <  2:3770389/93‑1 (MQ=255)
                                                                        gTCGCTCCCGCGCTCGCCCGGTTTATGGTGACGGGAAGCGTCAGCCGATCTGGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAg                 <  1:4855642/93‑1 (MQ=255)
                                                                         tCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGa                <  2:211794/93‑1 (MQ=255)
                                                                         tCGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGa                <  1:3006010/93‑1 (MQ=255)
                                                                          cGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGAc               >  2:3481072/1‑93 (MQ=255)
                                                                          cGCTCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGAc               >  2:1217273/1‑93 (MQ=255)
                                                                             tCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGcc            <  1:1030256/93‑1 (MQ=255)
                                                                             tCCCGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGcc            <  2:5086528/93‑1 (MQ=255)
                                                                              cccGCACTCGCCCGGTTGCTGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCt           >  1:3187840/1‑93 (MQ=255)
                                                                              cccGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCt           <  2:494470/93‑1 (MQ=255)
                                                                               ccGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCtt          <  2:3534241/93‑1 (MQ=255)
                                                                               ccGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCtt          >  1:3506343/1‑93 (MQ=255)
                                                                               ccGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCtt          <  2:173068/93‑1 (MQ=255)
                                                                               ccGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCtt          >  1:2386817/1‑93 (MQ=255)
                                                                                cGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTg         <  2:1825702/93‑1 (MQ=255)
                                                                                cGCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTg         >  1:3740629/1‑93 (MQ=255)
                                                                                 gCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGc        <  1:1106225/93‑1 (MQ=255)
                                                                                 gCACTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGGAAATCTAGCTTTTGCCGTAAAAGTCATCCTCATGCCAGACGCCttac        >  1:5785275/1‑91 (MQ=255)
                                                                                   aCTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCgg      >  1:4331680/1‑93 (MQ=255)
                                                                                    cTCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGc     >  2:4124511/1‑93 (MQ=255)
                                                                                     tCGCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCa    >  2:926347/1‑93 (MQ=255)
                                                                                       gCCCGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGc  <  1:1967962/93‑1 (MQ=255)
                                                                                          |                                                                                         
AACGGAACGGTTTTGGTTTCTGGCGGATAACAGAAACCGGCATCAGCACAGCCCTGGTAGGTGACAGTTAACGTCGCTCCCGCACTCGCCTGGTTGATGGTGACGGGAAGCGTCAGCCGATCGCGGTAAATCTCGCTTTTGCCGTAAAACTCATCTTCATGCCAGACGCCTTGCGGCAGC  >  NC_000913/4362208‑4362387

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: