BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,589,187	A→G	intergenic (‑323/‑40)	yjiY ← / → tsr	putative carbon starvation protein/methyl‑accepting chemotaxis protein I

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,589,187	0	A	G	100.0%	568.3 / NA	165	intergenic (‑323/‑40)	yjiY/tsr	putative carbon starvation protein/methyl‑accepting chemotaxis protein I
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (116/49); total (116/49)

Only 100 of 168 total aligned reads displayed.

TATGTAAATAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGT  >  NC_000913/4589098‑4589276

  tGTAAATAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCg                                                                                      >  1:6008996/1‑93 (MQ=255)

   gTAAATAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGa                                                                                     <  2:2356541/93‑1 (MQ=255)

    tAAATAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGaa                                                                                    >  1:1359003/1‑93 (MQ=255)

    tAAATAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGaa                                                                                    >  1:5310239/1‑93 (MQ=255)

     aaaTAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGaaa                                                                                   >  2:3729380/1‑93 (MQ=255)

     aaaTAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGaaa                                                                                   <  2:3631387/93‑1 (MQ=255)

      aataatGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGaaaa                                                                                  >  2:1422687/1‑93 (MQ=255)

      aataatGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGaaaa                                                                                  >  1:1651895/1‑93 (MQ=255)

      aataatGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGaaaa                                                                                  >  1:1661693/1‑93 (MQ=255)

        taatGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGCTATTCATAAAGTTTTTCCTTTCCGGGGCGAAAATc                                                                                >  1:3436124/1‑93 (MQ=255)

         aatGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCt                                                                               >  2:5210003/1‑93 (MQ=255)

         aatGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCt                                                                               >  1:1256052/1‑93 (MQ=255)

         aatGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCt                                                                               >  2:2828387/1‑93 (MQ=255)

         aatGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCt                                                                               <  1:804538/93‑1 (MQ=255)

          atGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCtt                                                                              >  2:1783060/1‑93 (MQ=255)

          atGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCtt                                                                              >  1:4985614/1‑93 (MQ=255)

           tGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTg                                                                             <  1:2136359/93‑1 (MQ=255)

             gCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCa                                                                           >  1:6091847/1‑93 (MQ=255)

                ttttAAATTCAGAGTGTGATTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCg                                                                        >  2:6345722/1‑93 (MQ=255)

                ttttAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCg                                                                        >  2:206673/1‑93 (MQ=255)

                ttttAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCg                                                                        <  1:4112117/93‑1 (MQ=255)

                  ttAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGt                                                                      <  1:1660317/93‑1 (MQ=255)

                   tAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTc                                                                     <  1:5885821/93‑1 (MQ=255)

                   tAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTc                                                                     >  1:5385207/1‑93 (MQ=255)

                   tAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTc                                                                     >  1:1508846/1‑93 (MQ=255)

                     aaTTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCca                                                                   >  1:4856385/1‑93 (MQ=255)

                       ttCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCcaca                                                                 >  1:1543690/1‑93 (MQ=255)

                        tCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAg                                                                <  1:3852682/93‑1 (MQ=255)

                         cAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAgg                                                               >  1:3939091/1‑93 (MQ=255)

                          agagTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGa                                                              >  2:1665331/1‑93 (MQ=255)

                          agagTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGa                                                              >  2:3670570/1‑93 (MQ=255)

                            agTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGaaa                                                            <  2:4393449/93‑1 (MQ=255)

                            agTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGaaa                                                            >  2:3351920/1‑93 (MQ=255)

                             gtgtGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAag                                                           <  2:4569784/93‑1 (MQ=255)

                              tgtgAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAaga                                                          >  2:228720/1‑93 (MQ=255)

                               gtgAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAagag                                                         >  2:3553812/1‑93 (MQ=255)

                               gtgAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAagag                                                         <  2:3351713/93‑1 (MQ=255)

                                tgAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAgaga                                                        >  2:166083/1‑93 (MQ=255)

                                tgAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAgaga                                                        >  1:5866369/1‑93 (MQ=255)

                                  aaTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGaaa                                                      >  2:6176343/1‑93 (MQ=255)

                                  aaTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGaaa                                                      <  1:2328117/93‑1 (MQ=255)

                                  aaTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGaaa                                                      >  1:3600347/1‑93 (MQ=255)

                                  aaTAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGaaa                                                      <  1:3180285/93‑1 (MQ=255)

                                     aaaaTTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCa                                                   <  1:4186000/93‑1 (MQ=255)

                                     aaaaTTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCa                                                   >  1:4833924/1‑93 (MQ=255)

                                         ttCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGtt                                               >  2:158585/1‑93 (MQ=255)

                                           cACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTaa                                             <  1:2203881/93‑1 (MQ=255)

                                           cACTCGGCGTAATCTCCGCAGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTaa                                             >  1:6286921/1‑93 (MQ=255)

                                            aCTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTaaa                                            >  2:3763917/1‑93 (MQ=255)

                                            aCTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTaaa                                            >  2:3174518/1‑93 (MQ=255)

                                              tCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAAc                                          >  1:1047040/1‑93 (MQ=255)

                                                ggCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGt                                        <  2:3990675/93‑1 (MQ=255)

                                                ggCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGt                                        >  2:4255795/1‑93 (MQ=255)

                                                 gCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTa                                       >  2:583135/1‑93 (MQ=255)

                                                    tAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCa                                    >  2:440843/1‑93 (MQ=255)

                                                     aaTCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGATAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCaa                                   >  1:2983292/1‑93 (MQ=255)

                                                     aaTCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCaa                                   >  1:5636060/1‑93 (MQ=255)

                                                      aTCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCaaa                                  >  2:1276361/1‑93 (MQ=255)

                                                      aTCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCaaa                                  >  1:3083078/1‑93 (MQ=255)

                                                         tcCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAtt                               >  2:1174278/1‑93 (MQ=255)

                                                         tcCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAtt                               >  1:884525/1‑93 (MQ=255)

                                                         tcCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAtt                               >  2:3027291/1‑93 (MQ=255)

                                                         tcCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAtt                               >  1:2036783/1‑93 (MQ=255)

                                                         tcCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAtt                               >  2:2558207/1‑93 (MQ=255)

                                                         tcCGCGGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAAtt                               >  2:2116903/1‑93 (MQ=255)

                                                            gcgGGATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATtgtg                            >  2:4721890/1‑93 (MQ=255)

                                                              gggATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAc                          >  1:6427904/1‑93 (MQ=255)

                                                              gggATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAc                          >  1:6203984/1‑93 (MQ=255)

                                                              gggATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAc                          <  1:3577536/93‑1 (MQ=255)

                                                               ggATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAGACCATGTTAAAACGTATCAAAATTGTGAcc                         >  2:3835447/1‑93 (MQ=255)

                                                               ggATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAcc                         >  2:5319950/1‑93 (MQ=255)

                                                               ggATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGAcc                         >  1:701145/1‑93 (MQ=255)

                                                                gATATTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCa                        >  2:2958587/1‑93 (MQ=255)

                                                                 atatTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAg                       >  1:2508196/1‑93 (MQ=255)

                                                                  tatTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGc                      >  2:2037935/1‑93 (MQ=255)

                                                                   atTCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCt                     <  2:3631898/93‑1 (MQ=255)

                                                                    ttCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCtt                    >  2:2483590/1‑93 (MQ=255)

                                                                    ttCATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCtt                    >  2:4768214/1‑93 (MQ=255)

                                                                      cATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAc                  <  1:4463983/93‑1 (MQ=255)

                                                                      cATAAAGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTAc                  <  1:4222528/93‑1 (MQ=255)

                                                                          aaGTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTActgct              >  1:922885/1‑93 (MQ=255)

                                                                            gTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTgg            >  1:1207610/1‑93 (MQ=255)

                                                                            gTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTgg            >  1:3679342/1‑93 (MQ=255)

                                                                            gTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTgg            <  1:1237606/93‑1 (MQ=255)

                                                                            gTTTTTCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTgg            >  1:5952710/1‑93 (MQ=255)

                                                                             tttttCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGt           >  2:5725346/1‑93 (MQ=255)

                                                                              ttttCCTTTCCGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGtt          >  1:4716567/1‑93 (MQ=255)

                                                                               tttcctttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGttt         >  1:3577851/1‑93 (MQ=255)

                                                                               tttcctttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGttt         <  2:5913242/93‑1 (MQ=255)

                                                                                 tcctttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTg       >  2:5621378/1‑93 (MQ=255)

                                                                                 tcctttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTg       <  1:5807728/93‑1 (MQ=255)

                                                                                  cctttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTgg      <  1:3423136/93‑1 (MQ=255)

                                                                                  cctttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTgg      >  2:4036732/1‑93 (MQ=255)

                                                                                  cctttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTgg      >  1:2404494/1‑93 (MQ=255)

                                                                                   ctttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGc     >  2:2680806/1‑93 (MQ=255)

                                                                                    tttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGcc    >  1:1880961/1‑93 (MQ=255)

                                                                                     ttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCg   >  2:2205642/1‑93 (MQ=255)

                                                                                     ttccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCg   >  1:1047555/1‑93 (MQ=255)

                                                                                      tccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGt  >  1:3601021/1‑93 (MQ=255)

                                                                                      tccGGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGt  >  1:3849468/1‑93 (MQ=255)

TATGTAAATAATGGCTTTTTAAATTCAGAGTGTGAATAAAATTCACTCGGCGTAATCTCCGCGGGATATTCATAAAGTTTTTCCTTTCCAGGCCGAAAATCTTGCATCGGTCCACAGGAAAGAGAAACCATGTTAAAACGTATCAAAATTGTGACCAGCTTACTGCTGGTTTTGGCCGT  >  NC_000913/4589098‑4589276

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`