BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	528,763	T→C	intergenic (+409/+106)	b0501 → / ← b0502	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	528,763	0	T	C	100.0%	722.3 / NA	209	intergenic (+409/+106)	b0501/b0502	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (110/99); total (110/99)

Only 100 of 212 total aligned reads displayed.

TTCCGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGTACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAACGTC  >  NC_000913/528673‑528852

 tCCGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCAcg                                                                                        >  2:2931515/1‑93 (MQ=255)

  ccGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCAcgg                                                                                       <  2:1791915/93‑1 (MQ=255)

  ccGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCAcgg                                                                                       <  1:1723179/93‑1 (MQ=255)

   cGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCAcggc                                                                                      <  1:3922030/93‑1 (MQ=255)

      aTTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCANGGTGACATGCCCCAGCACggcggc                                                                                   >  1:453495/1‑93 (MQ=255)

       ttAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGcc                                                                                  <  2:4054638/93‑1 (MQ=255)

       ttAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGcc                                                                                  >  1:2502065/1‑93 (MQ=255)

         aaaaTAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCg                                                                                >  2:4407977/1‑93 (MQ=255)

          aaataaatTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGa                                                                               <  2:2369607/93‑1 (MQ=255)

           aataaatTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGAt                                                                              >  2:5281471/1‑93 (MQ=255)

           aataaatTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGAt                                                                              >  2:3551283/1‑93 (MQ=255)

           aataaatTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGAt                                                                              <  1:2573903/93‑1 (MQ=255)

               aatTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTc                                                                          >  2:482164/1‑93 (MQ=255)

                atTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTcc                                                                         >  2:4417183/1‑93 (MQ=255)

                 ttCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCa                                                                        <  2:767064/93‑1 (MQ=255)

                 atCTTGCCGGGAAAGAAAGAGCAAATAAACCAGTAGCGGAAAACCAGCGGCGCGCCAGGGTAACATGCCCCAGCACGGCTGCCCGATAGTCCa                                                                        <  1:699581/92‑1 (MQ=255)

                  tCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAg                                                                       <  2:2226699/93‑1 (MQ=255)

                  tCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAg                                                                       >  2:4156292/1‑93 (MQ=255)

                     tGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGt                                                                    >  1:5005568/1‑93 (MQ=255)

                       ccGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTc                                                                  <  2:3741402/93‑1 (MQ=255)

                       ccGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTc                                                                  <  1:4926955/93‑1 (MQ=255)

                       ccGGAAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTc                                                                  <  1:3442412/93‑1 (MQ=255)

                        cGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCa                                                                 <  2:4609112/93‑1 (MQ=255)

                        cGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCa                                                                 >  2:4545625/1‑93 (MQ=255)

                           gaaagaaaGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCg                                                              >  2:1397165/1‑93 (MQ=255)

                           gaaagaaaGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCg                                                              >  2:4789280/1‑93 (MQ=255)

                             aagaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCggg                                                            <  1:2897545/93‑1 (MQ=255)

                             aagaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCggg                                                            >  1:1040134/1‑93 (MQ=255)

                              agaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgggg                                                           >  2:5033846/1‑93 (MQ=255)

                              agaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgggg                                                           >  1:6277277/1‑93 (MQ=255)

                              agaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgggg                                                           >  2:5383127/1‑93 (MQ=255)

                               gaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCggggg                                                          <  2:910528/93‑1 (MQ=255)

                               gaaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCggggg                                                          >  1:4311725/1‑93 (MQ=255)

                                aaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCgggggc                                                         >  1:4204809/1‑92 (MQ=255)

                                aaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCggggga                                                         >  2:1807573/1‑92 (MQ=255)

                                aaagaGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGt                                                         <  2:3569469/93‑1 (MQ=255)

                                  agagGAAAGAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTAc                                                       <  2:1695240/93‑1 (MQ=255)

                                   gagGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACt                                                      <  1:902789/93‑1 (MQ=255)

                                        aaTAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAg                                                 >  1:237125/1‑93 (MQ=255)

                                         aTAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGt                                                <  1:5468592/93‑1 (MQ=255)

                                            aaCCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTcgc                                             >  2:2761025/1‑93 (MQ=255)

                                             aCCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTcgcg                                            >  2:3913511/1‑93 (MQ=255)

                                             aCCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTcgcg                                            >  2:1206898/1‑93 (MQ=255)

                                               cATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGcc                                          <  2:1874863/93‑1 (MQ=255)

                                               cATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGcc                                          >  2:150852/1‑93 (MQ=255)

                                               cATTAGCGAAAAACCAGCGGCACG‑CAGGGTGACATGGCCCAGCCCGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCg                                         <  2:3265093/93‑1 (MQ=255)

                                                 ttAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGa                                        <  2:113432/93‑1 (MQ=255)

                                                 ttAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGa                                        <  2:1711524/93‑1 (MQ=255)

                                                  tAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCATGGTTCAGCGGGGGTACTGATAGTCGCGCCGAc                                       >  2:6478542/1‑93 (MQ=255)

                                                  tAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGAc                                       <  1:3204889/93‑1 (MQ=255)

                                                   aGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACt                                      >  1:5809637/1‑93 (MQ=255)

                                                    gCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTg                                     >  1:2877679/1‑93 (MQ=255)

                                                    gCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTg                                     <  1:1616883/93‑1 (MQ=255)

                                                    gCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTg                                     <  1:5281471/93‑1 (MQ=255)

                                                      ggAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCa                                   <  2:3132917/93‑1 (MQ=255)

                                                      ggAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCa                                   >  2:3868529/1‑93 (MQ=255)

                                                      ggAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCa                                   <  2:1832395/93‑1 (MQ=255)

                                                      ggAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGGACTGATAGTCGCGCCGACTGCa                                   >  1:6389672/1‑93 (MQ=255)

                                                        aaaaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATc                                 >  1:3795394/1‑93 (MQ=255)

                                                        aaaaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATc                                 <  2:2577484/93‑1 (MQ=255)

                                                         aaaCCAGCGGCACGCCGGGGTCACATGCCCCAGCGCGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCg                                <  1:4626016/93‑1 (MQ=255)

                                                         aaaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCg                                >  2:828195/1‑93 (MQ=255)

                                                         aaaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCCATAGTCCAGGGTTCAGCGGGGGTACTGATAGTcgcg                                            <  2:2615436/81‑1 (MQ=255)

                                                          aaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCga                               >  2:1084403/1‑93 (MQ=255)

                                                          aaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCga                               <  1:6478145/93‑1 (MQ=255)

                                                          aaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCga                               >  1:1022572/1‑93 (MQ=255)

                                                          aaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCga                               >  1:5891756/1‑93 (MQ=255)

                                                          aaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCga                               <  1:5393367/93‑1 (MQ=255)

                                                          aaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCga                               >  1:1873718/1‑93 (MQ=255)

                                                          aaCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGGACTGATAGTCGGGCCGAGTGCATCga                               >  2:4069395/1‑93 (MQ=255)

                                                           aCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCgag                              >  1:5163395/1‑93 (MQ=255)

                                                           aCCAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCgag                              >  1:3646082/1‑93 (MQ=255)

                                                            ccAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCgaga                             <  1:3809620/93‑1 (MQ=255)

                                                            ccAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCgaga                             >  2:4371341/1‑93 (MQ=255)

                                                             cAGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGaa                            >  2:5882001/1‑93 (MQ=255)

                                                              cgCGGCACGCCAGGGTGACATGCCGCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAAc                           <  2:917209/92‑1 (MQ=255)

                                                              aGCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAAc                           <  2:5147389/93‑1 (MQ=255)

                                                               gCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGGCGACTGCATCGAGAAcc                          >  2:5059624/1‑92 (MQ=255)

                                                               gCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAAcc                          >  2:5682749/1‑92 (MQ=255)

                                                               gCGGCACGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACt                          >  2:1227237/1‑93 (MQ=255)

                                                                    aCGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATa                     >  1:2148212/1‑93 (MQ=255)

                                                                    aCGCCAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATa                     <  1:2688025/93‑1 (MQ=255)

                                                                       ccAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACaa                  <  2:4909021/93‑1 (MQ=255)

                                                                        cAGGGTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAAc                 <  1:2086261/93‑1 (MQ=255)

                                                                          gggTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACtt               >  2:2498709/1‑93 (MQ=255)

                                                                          gggTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACtt               <  1:930373/93‑1 (MQ=255)

                                                                            gTGACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACtttt             <  2:5221091/93‑1 (MQ=255)

                                                                              gACATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTa           >  1:3356543/1‑93 (MQ=255)

                                                                               aCATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTAc          >  2:280265/1‑93 (MQ=255)

                                                                               aCATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGGACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTAc          >  1:1272726/1‑93 (MQ=255)

                                                                                caggCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACg         <  1:2931515/90‑1 (MQ=255)

                                                                                cATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGTCGACTGCATCGAGAACTCCATACAACTTTTTACg         <  2:1680476/93‑1 (MQ=255)

                                                                                cATGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACg         <  2:5586554/93‑1 (MQ=255)

                                                                                 aTGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACgg        <  2:4239141/93‑1 (MQ=255)

                                                                                  tGCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGGACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGa       >  1:5084187/1‑93 (MQ=255)

                                                                                   gCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGaa      <  1:4489006/93‑1 (MQ=255)

                                                                                   gCCCCAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGaa      <  1:2030367/93‑1 (MQ=255)

                                                                                     cccAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAACg    >  2:6193439/1‑93 (MQ=255)

                                                                                      ccAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAACGt   <  1:5454453/93‑1 (MQ=255)

                                                                                       cAGCACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAACGTc  <  2:4308090/93‑1 (MQ=255)

TTCCGGATTAAAATAAATTCTTGCCGGGAAAGAAAGAGGAAATAAACCATTAGCGGAAAACCAGCGGCACGCCAGGGTGACATGCCCCAGTACGGCGGCCCGATAGTCCAGGGTTCAGCGGGGGTACTGATAGTCGCGCCGACTGCATCGAGAACTCCATACAACTTTTTACGGAACGTC  >  NC_000913/528673‑528852

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`