BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	542,052	A→G	Q314R (CAG→CGG)	ybbZ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	542,052	0	A	G	100.0%	625.8 / NA	182	Q314R (CAG→CGG)	ybbZ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (86/96); total (86/96)

Only 100 of 187 total aligned reads displayed.

GCGCAGCACTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCAGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAGCA  >  NC_000913/541962‑542141

gcgcAGCACTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGt                                                                                         <  1:2470922/93‑1 (MQ=255)

  gcagcaCTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGttt                                                                                       >  2:3658081/1‑93 (MQ=255)

     gcaCTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAAt                                                                                    <  2:4639272/93‑1 (MQ=255)

     gcaCTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAAt                                                                                    >  2:3251778/1‑93 (MQ=255)

     gcaCTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGGTTAAt                                                                                    >  1:3333237/1‑93 (MQ=255)

       aCTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGt                                                                                  >  2:1247314/1‑93 (MQ=255)

       aCTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGt                                                                                  >  1:2320252/1‑93 (MQ=255)

        cTGGGGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGCTTAATgga                                                                                 >  1:4698411/1‑91 (MQ=255)

         tGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTAc                                                                                <  1:1712321/93‑1 (MQ=255)

         tGGTGATGACCGGGGAAGGGCGCATCAACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTAc                                                                                <  2:6385747/93‑1 (MQ=255)

          ggTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTAcc                                                                               <  2:5330049/93‑1 (MQ=255)

           gTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCg                                                                              >  2:4750789/1‑93 (MQ=255)

           gTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCg                                                                              <  2:2652584/93‑1 (MQ=255)

            tGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCgg                                                                             <  2:3357316/93‑1 (MQ=255)

             gATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCggg                                                                            >  2:4215439/1‑92 (MQ=255)

             gATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGt                                                                            <  1:2256858/93‑1 (MQ=255)

             gATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGt                                                                            <  2:2026361/93‑1 (MQ=255)

                 aCCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGAtt                                                                        <  2:5833591/93‑1 (MQ=255)

                 aCCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGAtt                                                                        <  1:1880906/93‑1 (MQ=255)

                 aCCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGAtt                                                                        <  2:4430634/93‑1 (MQ=255)

                   cGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTgg                                                                      >  1:2639322/1‑93 (MQ=255)

                   cGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTgg                                                                      >  2:5875177/1‑93 (MQ=255)

                   cGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGGTTAATGTACCGGTGATTgg                                                                      >  1:2587285/1‑93 (MQ=255)

                    ggggAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTggg                                                                     >  1:3705924/1‑93 (MQ=255)

                     gggAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGa                                                                    >  2:1053595/1‑93 (MQ=255)

                     gggAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGa                                                                    >  1:4112951/1‑93 (MQ=255)

                     gggAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGa                                                                    >  2:377352/1‑93 (MQ=255)

                      ggAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGAt                                                                   >  2:1913787/1‑93 (MQ=255)

                       gAAGGGCTCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTGCCGGTGATTGGGAtt                                                                  <  1:6379536/93‑1 (MQ=255)

                         aGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGc                                                                >  1:5300372/1‑93 (MQ=255)

                          gggCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCt                                                               >  2:4952773/1‑93 (MQ=255)

                           ggCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTg                                                              <  1:4925277/93‑1 (MQ=255)

                             cgcATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGc                                                            <  1:3616244/93‑1 (MQ=255)

                               cATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGt                                                          >  2:4415425/1‑93 (MQ=255)

                               cATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGt                                                          >  1:2077485/1‑93 (MQ=255)

                               cATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGt                                                          >  2:1351326/1‑93 (MQ=255)

                                aTCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGACTGCTGGCGTa                                                         <  1:2539514/93‑1 (MQ=255)

                                 tCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTAt                                                        <  1:217056/93‑1 (MQ=255)

                                 tCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTAt                                                        >  1:1649071/1‑93 (MQ=255)

                                 tCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTAt                                                        >  2:6325777/1‑93 (MQ=255)

                                   gACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTg                                                      <  2:3875120/93‑1 (MQ=255)

                                    aCTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTgg                                                     >  2:6395847/1‑93 (MQ=255)

                                     cTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTggg                                                    >  1:2943978/1‑93 (MQ=255)

                                       cGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTTGCGTATTGGGTg                                                  >  2:675495/1‑93 (MQ=255)

                                         cAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGAt                                                <  2:2628005/93‑1 (MQ=255)

                                          aaaCGCCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATg                                               <  1:2772506/93‑1 (MQ=255)

                                            aCGGCAGGCGGTAGAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGc                                             <  2:5845381/93‑1 (MQ=255)

                                            aCGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGc                                             <  1:4258586/93‑1 (MQ=255)

                                            aCGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGc                                             <  1:143007/93‑1 (MQ=255)

                                             cGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCg                                            >  2:277846/1‑93 (MQ=255)

                                               gCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTg                                          >  2:5003687/1‑93 (MQ=255)

                                                 aGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGa                                        <  1:2214502/93‑1 (MQ=255)

                                                  ggCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGaa                                       <  2:3254451/93‑1 (MQ=255)

                                                  ggCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGaa                                       >  1:874845/1‑93 (MQ=255)

                                                   gCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAg                                      >  2:5572031/1‑93 (MQ=255)

                                                   gCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAg                                      <  2:2211914/93‑1 (MQ=255)

                                                   gCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAg                                      <  1:4872451/93‑1 (MQ=255)

                                                    cGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAgt                                     <  2:5410901/93‑1 (MQ=255)

                                                    cGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAgt                                     <  2:1666843/93‑1 (MQ=255)

                                                     ggTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAgtg                                    >  2:5710227/1‑93 (MQ=255)

                                                     ggTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAgtg                                    >  2:3576658/1‑93 (MQ=255)

                                                     ggTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAgtg                                    >  2:2971883/1‑93 (MQ=255)

                                                      gTAAAGCGCCGCGGGTTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAgtgg                                   <  1:1901413/93‑1 (MQ=255)

                                                       tAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAgtggt                                  <  2:6271218/93‑1 (MQ=255)

                                                            cgccgcTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCAcc                             <  2:2938923/93‑1 (MQ=255)

                                                             gccgcTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCa                            <  1:10618/93‑1 (MQ=255)

                                                              ccgcTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAg                           >  2:2544246/1‑93 (MQ=255)

                                                               cgcTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGt                          >  1:1326981/1‑93 (MQ=255)

                                                                gcTGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTa                         <  1:3148865/93‑1 (MQ=255)

                                                                  tGGGTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACg                       >  2:3924978/1‑93 (MQ=255)

                                                                   gggTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACgg                      <  2:3132013/93‑1 (MQ=255)

                                                                   gggTGTGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACgg                      <  2:2856251/93‑1 (MQ=255)

                                                                   gggTGTGGCGGCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGTAGTGGTGCACCAGTACgg                      >  2:3327305/1‑93 (MQ=255)

                                                                     gtgtGGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCa                    <  2:5132108/93‑1 (MQ=255)

                                                                       gtgGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCAtt                  <  1:1042135/93‑1 (MQ=255)

                                                                       gtgGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCAtt                  <  1:606535/93‑1 (MQ=255)

                                                                       gtgGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCAtt                  <  1:890572/93‑1 (MQ=255)

                                                                       gtgGCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCAtt                  <  2:2439741/93‑1 (MQ=255)

                                                                         ggCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGa                <  2:1768945/93‑1 (MQ=255)

                                                                          gCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGAc               <  2:4589822/93‑1 (MQ=255)

                                                                          gCGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGAc               <  1:3028127/93‑1 (MQ=255)

                                                                           cGTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGAcg              <  1:3450943/93‑1 (MQ=255)

                                                                            gTCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGAcgc             <  1:4304337/93‑1 (MQ=255)

                                                                             tCGGTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGAcgcg            <  2:1110971/93‑1 (MQ=255)

                                                                               ggTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGt          <  1:357033/93‑1 (MQ=255)

                                                                                gTGGCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTa         <  1:4778868/93‑1 (MQ=255)

                                                                                 tcgagAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTAt        <  1:3893804/89‑1 (MQ=255)

                                                                                  ggCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTAtt       >  2:5984563/1‑93 (MQ=255)

                                                                                  ggCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTAtt       <  1:43201/93‑1 (MQ=255)

                                                                                   gCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTc      >  2:2064300/1‑93 (MQ=255)

                                                                                   gCGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTc      <  2:1722609/93‑1 (MQ=255)

                                                                                    cGAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGTGGTATTCa     <  1:6313438/93‑1 (MQ=255)

                                                                                     gAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAg    <  1:5435417/93‑1 (MQ=255)

                                                                                     gAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAg    <  2:3069674/93‑1 (MQ=255)

                                                                                     gAAGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAg    >  1:3355276/1‑93 (MQ=255)

                                                                                      aaGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAGc   >  1:5695373/1‑93 (MQ=255)

                                                                                      aaGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAGc   >  1:1169722/1‑93 (MQ=255)

                                                                                      aaGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAGc   >  1:4198926/1‑93 (MQ=255)

                                                                                       aGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAGCa  >  1:4789918/1‑93 (MQ=255)

                                                                                       aGCGGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAGCa  >  1:2858863/1‑93 (MQ=255)

GCGCAGCACTGGTGATTACCGGGGAAGGGCGCATCGACTCGCAAACGGCAGGCGGTAAAGCGCCGCTGGGTGTGGCGTCGGTGGCGAAGCAGTTTAATGTACCGGTGATTGGGATTGCTGGCGTATTGGGTGATGGCGTGGAAGTGGTGCACCAGTACGGCATTGACGCGGTATTCAGCA  >  NC_000913/541962‑542141

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`