mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 38 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AP012306 | 644310 = | 325 (0.900) | 99 (0.280) +G |
38/460 | 12.2 | 24.1% | noncoding (1/76 nt) | lysQ | tRNA‑Lys |
| ? | AP012306 | = 2073543 | 303 (0.840) | intergenic (+3/‑44) | valX/valY | tRNA‑Val/tRNA‑Val | |||||
| * | ? | AP012306 | = 3147373 | 220 (0.610) | 4 (0.020) | 4/246 | 19.1 | 3.3% | intergenic (‑761/+150) | dppA/proK | dipeptide transporter/tRNA‑Pro |
| ? | AP012306 | 3147542 = | 121 (0.630) | noncoding (58/77 nt) | proK | tRNA‑Pro | |||||
| * | ? | AP012306 | = 1810666 | 378 (1.050) | 12 (0.030) | 10/442 | 22.9 | 3.1% | intergenic (+19/+224) | yeiA/mglC | predicted oxidoreductase/methyl‑galactoside transporter subunit |
| ? | AP012306 | = 1810680 | 382 (1.110) | intergenic (+33/+210) | yeiA/mglC | predicted oxidoreductase/methyl‑galactoside transporter subunit | |||||
| * | ? | AP012306 | = 643955 | 317 (0.880) | 3 (0.010) | 3/310 | 23.3 | 1.4% | noncoding (76/76 nt) | lysY | tRNA‑Lys |
| ? | AP012306 | 644386 = | 223 (0.920) | intergenic (+1/‑432) | lysQ/nadA | tRNA‑Lys/quinolinate synthase, subunit A | |||||
| * | ? | AP012306 | = 2980068 | 326 (0.900) | 9 (0.030) | 8/442 | 24.2 | 2.8% | coding (1674/2136 nt) | yrfF | predicted inner membrane protein |
| ? | AP012306 | = 2980078 | 302 (0.880) | coding (1684/2136 nt) | yrfF | predicted inner membrane protein | |||||
| * | ? | AP012306 | = 1928057 | 310 (0.860) | 5 (0.020) | 5/412 | 25.6 | 1.6% | coding (787/900 nt) | yfaD | conserved protein |
| ? | AP012306 | 1928241 = | 344 (1.070) | coding (59/186 nt) | ypaA | predicted protein | |||||
| * | ? | AP012306 | = 1229616 | 319 (0.880) | 6 (0.020) | 6/436 | 25.6 | 1.9% | intergenic (+52/‑335) | ydcW/ydcX | medium chain aldehyde dehydrogenase/predicted inner membrane protein |
| ? | AP012306 | = 1229625 | 316 (0.930) | intergenic (+61/‑326) | ydcW/ydcX | medium chain aldehyde dehydrogenase/predicted inner membrane protein | |||||
| * | ? | AP012306 | 3466429 = | 215 (0.600) | 8 (0.020) | 6/444 | 25.8 | 3.8% | noncoding (76/77 nt) | ileT | tRNA‑Ile |
| ? | AP012306 | 3466450 = | 197 (0.570) | intergenic (+20/‑23) | ileT/alaT | tRNA‑Ile/tRNA‑Ala | |||||
| * | ? | AP012306 | = 2894929 | 35 (0.100) | 8 (0.020) | 6/444 | 25.8 | 6.5% | noncoding (76/77 nt) | ileU | tRNA‑Ile |
| ? | AP012306 | 3466450 = | 197 (0.570) | intergenic (+20/‑23) | ileT/alaT | tRNA‑Ile/tRNA‑Ala | |||||
| * | ? | AP012306 | = 2894917 | 40 (0.110) | 8 (0.020) | 6/444 | 25.8 | 6.3% | intergenic (‑32/+11) | alaU/ileU | tRNA‑Ala/tRNA‑Ile |
| ? | AP012306 | 3466438 = | 201 (0.580) | intergenic (+8/‑35) | ileT/alaT | tRNA‑Ile/tRNA‑Ala | |||||