breseq version 0.35.4 revision f352f80f4bc9
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
Predicted mutations | |||||
---|---|---|---|---|---|
evidence | position | mutation | annotation | gene | description |
JC | 162,220 | +51 bp | intergenic (+131/+243) | mrcB → / ← hemL | fused glycosyl transferase and transpeptidase/glutamate‑1‑semialdehyde aminotransferase |
MC JC | 1,313,484 | Δ33,392 bp | [lsrF]–dmsD | 34 genes [lsrF], lsrG, tam, yneE, uxaB, yneF, yneG, yneH, yneI, yneJ, yneK, ydeA, marC, marR, marA, marB, eamA, ydeE, ydeH, ydeI, ydeJ, dcp, rspB, rspA, ynfA, ynfB, speG, ynfC, ynfD, ynfE, ynfF, ynfG, ynfH, dmsD |
|
RA | 1,486,241 | G→A | intergenic (‑2088/‑492) | thrS ← / → yniD | threonyl‑tRNA synthetase/predicted protein |
RA | 2,073,848 | Δ2 bp | intergenic (+106/+161) | lysV → / ← xapR | tRNA‑Lys/DNA‑binding transcriptional activator |
RA | 2,073,851 | Δ1 bp | intergenic (+109/+159) | lysV → / ← xapR | tRNA‑Lys/DNA‑binding transcriptional activator |
RA | 2,423,958 | G→A | R77W (CGG→TGG) | relA ← | (p)ppGpp synthetase I/GTP pyrophosphokinase |
MC JC | 3,245,072 | Δ82 bp | intergenic (‑91/‑736) | pyrE ← / → yicC | orotate phosphoribosyltransferase/conserved protein |
JC | 3,896,185 | Δ11 bp | coding (154‑164/948 nt) | treR ← | DNA‑binding transcriptional repressor |