| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 4,476,063 | (A)7→6 | pseudogene (6/585 nt) | bdcR → | TetR/AcrR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,476,057 | 0 | A | . | 99.2% | 2807.7 / 8.7 | 587 | intergenic (‑80/‑1) | bdcA/bdcR | SDR family oxidoreductase/TetR/AcrR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base . (382/200); minor base G (4/1); total (386/201) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.65e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 612 total aligned reads displayed.
GGCACCGATACCACGACTGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACTAAAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATT > NZ_CP025268/4475918‑4476192 | gCACCGATACCACGACTGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACTaa > 1:6391012/1‑140 (MQ=255) gATACCACGACTGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACTaaaaaac > 1:4059325/1‑139 (MQ=255) ccACGACTGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACTGGTTTTGTAATGGTCACTaaaaatcaatg > 1:8184463/1‑134 (MQ=255) aCGACTGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATGACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAAtctc < 2:8106429/140‑1 (MQ=255) cGACTGCCACCGAGGATGAGACCTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTGTCTGTCCACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTcg < 1:1290327/140‑1 (MQ=255) cGACTGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTcg < 1:5697783/140‑1 (MQ=255) aCTGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTcgcg > 1:4382242/1‑140 (MQ=255) tGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGtt > 2:8490737/1‑140 (MQ=255) gCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACACAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTc > 2:5119986/1‑140 (MQ=255) ccACCGAGGATTAGACCTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCTTTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AATAAACAATCTCGCGTTcc > 2:3817094/1‑140 (MQ=255) ccACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTcc > 2:3740331/1‑140 (MQ=255) cGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGgt < 2:4737510/140‑1 (MQ=255) tCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTc > 2:1157171/1‑140 (MQ=255) tACCTGTAAAAGCTCCCATAATGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACGTTCTGTCAACCGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCTGACGTTTCGCt < 2:214780/140‑1 (MQ=255) aCCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTc > 1:5486129/1‑140 (MQ=255) aCCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTc > 1:3900406/1‑140 (MQ=255) aCCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTc < 1:3973618/140‑1 (MQ=255) aCCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTc < 1:8966731/140‑1 (MQ=255) ccTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTcc > 1:6903261/1‑140 (MQ=255) ccTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTcc > 1:9274862/1‑140 (MQ=255) gTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTATTGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGa > 1:7881985/1‑140 (MQ=255) gTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGa > 2:9291362/1‑140 (MQ=255) gTAAAAGCGCCCATAAGGACAACTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGAAATGGTCAC‑GAAAAAACAATCTCGCGTTCCAGGTCTTCCCAGACTTTTCGCACCTGa > 1:286781/1‑140 (MQ=255) aaaaGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGc > 2:1916944/1‑140 (MQ=255) aaaaGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGc > 1:3248406/1‑140 (MQ=255) cgcCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCa > 1:1062429/1‑140 (MQ=255) cgcCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCa > 2:4902233/1‑140 (MQ=255) cgcCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTGTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCa > 1:4153231/1‑140 (MQ=255) cccATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAAt > 2:2300551/1‑140 (MQ=255) cccATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAAt < 1:1879369/140‑1 (MQ=255) aGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGc < 1:6551679/140‑1 (MQ=255) tCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCaa > 1:4500944/1‑140 (MQ=255) tCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCaa < 2:1019648/140‑1 (MQ=255) cTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCaaaa > 1:5387556/1‑140 (MQ=255) cTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCaaaa > 1:72858/1‑140 (MQ=255) cTTGATTTATTATGTAACATGCATTACAAAACTGTTTAAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAAACTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCCATCTCTGCGGCacaa > 2:3485205/1‑140 (MQ=255) tGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGt > 2:7852112/1‑140 (MQ=255) attatGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCACAAGTGCtttt > 1:6325241/1‑140 (MQ=255) attatGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCACAAGTGCtgtt > 2:7305899/1‑140 (MQ=255) attatGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAATAGTGCtttt > 1:3494108/1‑140 (MQ=255) attatGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATATCTGCGGCAAAAGTGCtttt > 2:7389934/1‑140 (MQ=255) tatGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTc > 2:6839266/1‑140 (MQ=255) tatGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTc > 2:3163599/1‑140 (MQ=255) tAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCa > 1:1701743/1‑140 (MQ=255) tAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCa > 1:8077118/1‑140 (MQ=255) tGCATTACAAAACTGTTTTAACTTTCTGTCTACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAg > 1:7465075/1‑140 (MQ=255) tGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCCAAAAg > 1:6719623/1‑140 (MQ=255) tGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAg > 1:4943758/1‑140 (MQ=255) tGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAg > 1:4799102/1‑140 (MQ=255) tGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAg > 2:3606252/1‑140 (MQ=255) tGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAg > 1:3404946/1‑140 (MQ=255) tGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAg > 1:428242/1‑140 (MQ=255) tGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGAGGCAATAGTGCTTTTTCACCagaatg > 2:6430125/1‑138 (MQ=255) gCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTTTAATGGTCACT‑AAAAATCAATCTCGAGTTCCAGGTAGTCCCAGACGTTTCGCTCCTTAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCGAAAAgt > 2:866555/1‑139 (MQ=255) cATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGt > 2:2462275/1‑140 (MQ=255) aTTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGtt > 2:5217716/1‑140 (MQ=255) tACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCACAAGTGCTGTTTCACCAAAATGGTTTc > 1:8730937/1‑140 (MQ=255) tACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTc > 2:7767314/1‑140 (MQ=255) aCAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCg < 2:1868702/140‑1 (MQ=255) cAAAACTGTTTTTACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCTGGGCGTCCCAGACGTTTCGCTCGTGAGCCGGCAATCTCTGCGGCAAAAGTGCTTTTTCACGATAAATGTTTCGa > 2:6733967/1‑140 (MQ=255) cAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGa < 2:896015/140‑1 (MQ=255) cAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGa < 2:3363537/140‑1 (MQ=255) aaaaCTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGAt < 2:8418012/140‑1 (MQ=255) ttttttAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAACAGGTTTCGATGCTGt < 2:7986190/138‑1 (MQ=255) tGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCCGGCCATCTCTGCGGCTAAAGTGCTTTTTCACCAATATGGTTTCGATGCTGt > 1:1494705/1‑140 (MQ=255) tGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGt > 2:2771254/1‑140 (MQ=255) ttttAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCa > 1:521925/1‑140 (MQ=255) ttttAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCa > 2:6252352/1‑140 (MQ=255) tttAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAg < 2:9404725/140‑1 (MQ=255) tttAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAg < 1:5950815/140‑1 (MQ=255) tttAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAg < 1:9547684/140‑1 (MQ=255) ttAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAgt > 2:879370/1‑140 (MQ=255) ttAACTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAgt > 1:8319798/1‑140 (MQ=255) cTTTCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTg < 2:6024310/140‑1 (MQ=255) ttCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCt < 2:3902125/140‑1 (MQ=255) tCTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTg < 1:6250887/140‑1 (MQ=255) cTGTCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAATGTGCTTTTTCACCAAACTGGTTTCGATGCTGTCAGTGGTGCTGa > 2:7159532/1‑140 (MQ=255) tCAACAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGt < 1:6080724/140‑1 (MQ=255) aaCAGGTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTa < 1:1545036/140‑1 (MQ=255) ggTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGa < 1:3100368/140‑1 (MQ=255) gTTTTGTATTGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCCAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTGCTGAt > 2:2901053/1‑140 (MQ=255) gTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGAt < 2:6100231/140‑1 (MQ=255) gTTTTGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGAt < 2:4489646/140‑1 (MQ=255) ttGTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTAt > 2:48020/1‑140 (MQ=255) tGTAATGGTCACT‑CAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCGGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATc < 1:7620230/140‑1 (MQ=255) gTAATGGTCACT‑AAAACACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCt < 1:7082317/140‑1 (MQ=255) gTAATGGTCACT‑AAAAAACAATCTCGCGTTCCATGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTAATGATTATCt < 2:4973763/140‑1 (MQ=255) gTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCt < 1:2550264/140‑1 (MQ=255) gTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCt < 1:2385500/140‑1 (MQ=255) gTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCt < 2:4042334/140‑1 (MQ=255) gTAATGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCt < 1:2318021/140‑1 (MQ=255) tGGTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGt < 2:5734151/140‑1 (MQ=255) ggTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAATAGGTTTCGATGCTGTCAGTGTTGCTGACGTTACTGATTATCTTGGTa > 2:7617157/1‑140 (MQ=255) ggTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTa > 2:1451916/1‑140 (MQ=255) ggTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTAGCTGAAGTTACTGATTATCTTGGTa > 2:8910658/1‑140 (MQ=255) gTCACT‑AAAAAACAATCTCGCGTTCCAGTTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGTTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTAt > 2:5445342/1‑140 (MQ=255) gTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTAt > 2:4378391/1‑140 (MQ=255) gTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTAt > 2:2664691/1‑140 (MQ=255) gTCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTAt > 1:3741416/1‑140 (MQ=255) tCACT‑AAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTAtt < 1:2067640/140‑1 (MQ=255) | GGCACCGATACCACGACTGCCACCGAGGATGAGAACTGTCTTACCTGTAAAAGCGCCCATAAGGACTCCTTGATTTATTATGTAACATGCATTACAAAACTGTTTTAACTTTCTGTCAACAGGTTTTGTAATGGTCACTAAAAAAACAATCTCGCGTTCCAGGTCGTCCCAGACGTTTCGCTCCTGAGCAGGCAATCTCTGCGGCAAAAGTGCTTTTTCACCAAAAAGGTTTCGATGCTGTCAGTGTTGCTGAAGTTACTGATTATCTTGGTATT > NZ_CP025268/4475918‑4476192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |