BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	4,608,009	(G)_9→8	noncoding (72/88 nt)	CXP41_RS23865 ←	tRNA‑Leu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	4,608,001	0	G	.	97.9%	1037.1 / 22.4	243	noncoding (80/88 nt)	CXP41_RS23865	tRNA‑Leu
Reads supporting (aligned to +/- strand): ref base G (4/1); new base . (69/163); total (73/170)
Fisher's exact test for biased strand distribution p-value = 3.24e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.43e-01

Only 100 of 302 total aligned reads displayed.

CACAAACAGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAGGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGA  >  NZ_CP025268/4607862‑4608136

 acaAACAGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgg                                                                                                                                        <  1:1597902/140‑1 (MQ=255)

  caAACAGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGTATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAggg                                                                                                                                       >  1:7394026/1‑140 (MQ=255)

  caAACAGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAggg                                                                                                                                       >  1:8257594/1‑140 (MQ=255)

    aaCTGTTGCGGCTTTAAATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCTTCATGCTGATGATAATGAATTTGAATCTGGTATGAAAAATCAAGGAAGAAACACGAAAGGACGTAAAGATAATTGGTGGGAggggg                                                                                                                                     <  1:3507038/140‑1 (MQ=255)

    aaCAGTTGCGGCATTACATTTTGCTACCTTCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAggggg                                                                                                                                     <  2:5492130/140‑1 (MQ=255)

     aCAGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgggggg                                                                                                                                    >  2:467745/1‑140 (MQ=255)

      cAGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAggggggg                                                                                                                                   <  2:8470659/140‑1 (MQ=255)

       aGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAATATCATGGAAGAAACACGAAAGGAAGTAAAGATAACTGGTGCGAgggggggg                                                                                                                                  >  2:5746783/1‑140 (MQ=255)

       aGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATACTTGGTGCGAgggggggg                                                                                                                                  <  1:7994238/140‑1 (MQ=255)

       aGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgggggggg                                                                                                                                  >  1:107277/1‑140 (MQ=255)

       aGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgggggggg                                                                                                                                  <  2:7147958/140‑1 (MQ=255)

       aGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgggggggg                                                                                                                                  >  1:2055384/1‑140 (MQ=255)

       aGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgggggggg                                                                                                                                  >  2:2527567/1‑140 (MQ=255)

       aGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgggggggg                                                                                                                                  >  1:5699691/1‑140 (MQ=255)

       aGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgggggggg                                                                                                                                  >  1:3468124/1‑140 (MQ=255)

       aGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgg                                                                                                                                        <  2:1331350/134‑1 (MQ=255)

       aGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgg                                                                                                                                        >  1:1331350/1‑134 (MQ=255)

        gTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAgggggggga                                                                                                                                 <  1:4080154/140‑2 (MQ=255)

         ttGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAggggggggac                                                                                                                                >  1:2560892/1‑138 (MQ=255)

         ttGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAggggggggac                                                                                                                                >  1:8586469/1‑138 (MQ=255)

         ttGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAggggggggac                                                                                                                                >  2:840703/1‑138 (MQ=255)

          tGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAggggggggact                                                                                                                               >  1:794021/1‑137 (MQ=255)

           gCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAggggggggactt                                                                                                                              <  2:6362988/140‑5 (MQ=255)

             ggCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGa                                                                                                                           <  2:5810088/140‑1 (MQ=255)

                 ttACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAAccc                                                                                                                       >  2:5231418/1‑140 (MQ=255)

                  tACATTTTGCTACCTTCGTGCGTGGCACTTAGTGCTGGCATCTTGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAAcccc                                                                                                                      <  1:6765282/140‑1 (MQ=255)

                  tACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACACGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAAcccc                                                                                                                      <  2:749555/140‑1 (MQ=255)

                  tACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGACGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAAcccc                                                                                                                      <  2:3012778/140‑1 (MQ=255)

                  tACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑‑GGGGGGGACTTGAAccccc                                                                                                                     <  2:498818/140‑1 (MQ=255)

                  tACATTTTGATACCATCGTGCATGGCACTTATTGCTGGAATAATGCTGATGATAATGCATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGCAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAAcccc                                                                                                                      <  2:2746057/140‑1 (MQ=255)

                    cATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATACTTGGTGCGA‑GGGGGGGGACTTGAACCCCCa                                                                                                                    <  1:6947874/140‑1 (MQ=255)

                    cATTTTGCGACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGACTCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCa                                                                                                                    <  1:6543479/140‑1 (MQ=255)

                     aTTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCAc                                                                                                                   <  2:4882422/140‑1 (MQ=255)

                      ttttGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACg                                                                                                                  <  2:5347831/140‑1 (MQ=255)

                      ttttGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACg                                                                                                                  <  2:8852695/140‑1 (MQ=255)

                      ttttGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACg                                                                                                                  <  1:3836423/140‑1 (MQ=255)

                      ttttGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTGGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCG‑CGGGGGGGGACTTGAACCCCCACg                                                                                                                  <  1:8970269/140‑1 (MQ=255)

                      ttttGCTACCATCGTGCCTGGCACTTATTGCTGGAATCATGCTTATTATAATTAATTTGAATCAGGTATTAAAAATCAAGTAAGAAACAAGAAAGGAAGTAAAGATAATTGGGGCGA‑GGGGGGGGACTTGAACCCCCACg                                                                                                                  <  1:1853992/140‑1 (MQ=255)

                         tGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAATATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTcc                                                                                                               >  2:6975849/1‑140 (MQ=255)

                            tACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCG‑TGGGGGGGGACTTGAACCCCCACGTCCGTa                                                                                                            <  1:2644932/140‑1 (MQ=255)

                             aCCATCGTGCCTGGCCCTTAGTGCTGGCATCTTGCTGATGATAATGACTTTGAATCTGGGATGAAAAATCACGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTaa                                                                                                           <  1:2875961/140‑1 (MQ=38)

                              ccATCGTGCCTGGCACTTCTTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCACGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAg                                                                                                          <  1:4552604/140‑1 (MQ=255)

                              ccATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAACCAAGAACGGAAGTAACGATAATTGGTGCG‑TGGGGGGGGACTTGAACCCCCACGTCCGTAAg                                                                                                          <  1:5442789/140‑1 (MQ=39)

                              ccATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAg                                                                                                          >  1:2393696/1‑140 (MQ=255)

                               cATCGTGCCTGGCACTTTTTGCTGTCATAATGCTGATGATTATGATTTTGAATCAGGGATTAAAAATCATGGAAGAAACAAGAAAGGAAGTAAACATAATTGGTGCGA‑GGGGGGGGACTTTAACCCCCACGTCCGTAAgg                                                                                                         <  1:5182869/140‑1 (MQ=37)

                               cATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAgg                                                                                                         <  1:9230906/140‑1 (MQ=255)

                                aTCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATTAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGa                                                                                                        <  2:1774348/140‑1 (MQ=255)

                                   gTGCCTGGCACTTATTGCTGGCATCAGGCTGCTGATAATGAATTTGAATCCGGGAGGAAATATCAAGGAAGAATCTCGACAGGAAGTAAAGATACTTGGTGCGA‑GGGGGGGGACTGGAACCCCCCCGGCCGGAAGGacac                                                                                                     >  2:6407343/1‑140 (MQ=255)

                                    tGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                                                                                                    <  2:3929610/140‑1 (MQ=255)

                                    tGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                                                                                                    >  2:3783522/1‑140 (MQ=255)

                                    tGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                                                                                                    >  2:3478331/1‑140 (MQ=255)

                                      ccTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTaa                                                                                                  >  2:4125959/1‑140 (MQ=255)

                                      ccTGGCACTTATTGATGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGACGAAACAAGACAGGAAGTAAAGATCATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTCCGGACCCTat                                                                                                  >  2:6024399/1‑139 (MQ=38)

                                          gCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAAACAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACAcc                                                                                              <  1:8352381/140‑1 (MQ=255)

                                               tATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACACCCACGTCCGTAAGGACACTAACACCTGAAg                                                                                         >  1:7546583/1‑140 (MQ=255)

                                                aTTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGc                                                                                        >  1:1262483/1‑140 (MQ=255)

                                                 ttGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCt                                                                                       >  1:958961/1‑140 (MQ=255)

                                                 ttGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCt                                                                                       >  1:9502652/1‑140 (MQ=255)

                                                  tGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTa                                                                                      <  2:6631031/140‑1 (MQ=255)

                                                     tGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAgcg                                                                                   <  2:6823981/140‑1 (MQ=255)

                                                     tGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAgcg                                                                                   >  1:3284043/1‑140 (MQ=255)

                                                     tGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAgcg                                                                                   >  2:812835/1‑140 (MQ=255)

                                                     tGGAATCATGCTGATTATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAgcg                                                                                   <  1:3887229/140‑1 (MQ=255)

                                                            atGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTAc                                                                            >  1:4817806/1‑140 (MQ=255)

                                                              gCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCa                                                                          <  2:4462016/140‑1 (MQ=255)

                                                                  atgatAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTc                                                                      >  2:7736523/1‑140 (MQ=255)

                                                                  atgatAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTc                                                                      >  2:1570498/1‑140 (MQ=255)

                                                                    gatAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTccc                                                                    >  1:7764291/1‑139 (MQ=255)

                                                                     atACTGAATTATAATCAGCGATGAACAATCAAGGAAGAAACATTAAAGGAAGTCTAGAGCAGTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                   <  2:9210348/140‑1 (MQ=14)

                                                                     atAATGAATTTGAATCAGGGAAGAAAAATCAAGGAAGAAACCCGAACGGAAGTAAAGAAAATTGGAGCG‑CGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGACGCGAGCGCGTCTACCAATTCCGc                                                                   <  2:1937764/140‑1 (MQ=18)

                                                                       aaTGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCa                                                                 <  1:2939398/140‑1 (MQ=255)

                                                                       aaTGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCa                                                                 >  1:6013176/1‑140 (MQ=255)

                                                                       aaTGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCa                                                                 <  2:2177689/140‑1 (MQ=255)

                                                                         tGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAAGTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAcc                                                               >  2:8317021/1‑140 (MQ=255)

                                                                          taaTTTTAATCAGGGAAGAAAAATCAAGGAATATACTAGCAAGGAAGTAATGTTTATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCt                                                              <  2:1262483/139‑1 (MQ=17)

                                                                               tGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGca                                                         <  2:6600304/140‑1 (MQ=255)

                                                                                gAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcac                                                        <  2:1049259/140‑1 (MQ=255)

                                                                                gAAACAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcac                                                        <  1:4970004/140‑1 (MQ=255)

                                                                                  aTCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAg                                                      <  2:9383646/140‑1 (MQ=255)

                                                                                            aaaaaTCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACt                                            <  2:3447719/140‑1 (MQ=255)

                                                                                               aaTCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACtttt                                         <  2:8019279/140‑1 (MQ=255)

                                                                                                      gaagaaACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGata                                  <  1:6621135/140‑1 (MQ=255)

                                                                                                      gaagaaACAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGata                                  <  2:8638164/140‑1 (MQ=255)

                                                                                                          aaaCAAGCAAGGAAGTCAAGCTAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGc                              <  2:1456955/140‑1 (MQ=18)

                                                                                                          aaaCAAGAAAGGAAGTAAAGATACTGGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGc                              <  2:8786230/140‑1 (MQ=255)

                                                                                                          aaaCAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGc                              <  1:4344283/140‑1 (MQ=255)

                                                                                                          aaaCAAGAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGc                              <  2:5596030/140‑1 (MQ=255)

                                                                                                            aCAAGAATGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCt                            <  1:7075191/140‑1 (MQ=255)

                                                                                                                gAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGtt                        <  2:6284657/140‑1 (MQ=255)

                                                                                                                gAAAGGAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGtt                        <  1:8753973/140‑1 (MQ=255)

                                                                                                                    ggAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATATTACTTTTTTTGATATCGCCTCTGTTggg                    >  1:1018632/1‑139 (MQ=18)

                                                                                                                     gAAGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTg                   <  2:324759/140‑1 (MQ=255)

                                                                                                                       aGTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTCACTCATGAACCTATCCCGGCACACAAGACCGACACCAACGCCCAGTCAACTAACTTTATTTGATATCGCGTCGTTTGGTggg                 >  1:6878934/1‑138 (MQ=12)

                                                                                                                        gTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGa                <  2:2348146/140‑1 (MQ=255)

                                                                                                                        gTAAAGATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGa                >  1:1393260/1‑140 (MQ=255)

                                                                                                                             taTAATTGGTGCGA‑GGGGGGGGACTTTAACCCCCACGTACGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAggggg           <  2:1909457/139‑1 (MQ=255)

                                                                                                                             gATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAggggg           <  2:1505944/140‑1 (MQ=255)

                                                                                                                             gATAATTGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAggggg           <  2:4086008/140‑1 (MQ=255)

                                                                                                                               tacttGGTGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAggggggg         <  1:7328676/137‑1 (MQ=255)

                                                                                                                                      tGCGA‑GGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGa  <  1:5859485/140‑1 (MQ=255)

CACAAACAGTTGCGGCATTACATTTTGCTACCATCGTGCCTGGCACTTATTGCTGGCATCATGCTGATGATAATGAATTTGAATCAGGGATGAAAAATCAAGGAAGAAACAAGAAAGGAAGTAAAGATAATTGGTGCGAGGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGA  >  NZ_CP025268/4607862‑4608136

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`