Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 939,446 (A)7→8 intergenic (‑289/‑255) trxB ← / → lrp thioredoxin‑disulfide reductase/leucine‑responsive transcriptional regulator Lrp

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP025268939,4391.A96.2% 2004.1 / 55.2 532intergenic (‑282/‑262)trxB/lrpthioredoxin‑disulfide reductase/leucine‑responsive transcriptional regulator Lrp
Reads supporting (aligned to +/- strand):  ref base . (5/15);  new base A (176/330);  total (186/346)
Fisher's exact test for biased strand distribution p-value = 4.75e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 637 total aligned reads displayed.

CTGCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGTCTTCTC  >  NZ_CP025268/939300‑939572
                                                                                                                                            |                                                                                                                                         
 tGCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCTATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGgaaga                                                                                                                                          >  1:5373033/1‑140 (MQ=255)
 tGCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGgaaga                                                                                                                                          >  1:5200046/1‑140 (MQ=255)
 tGCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGgaaga                                                                                                                                          >  2:6588168/1‑140 (MQ=255)
 tGCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGgaaga                                                                                                                                          >  2:4744331/1‑140 (MQ=255)
 tGCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTAAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTGTGACAATCCCCTGGTGTTTGGCGAACACATTCGAGgcaga                                                                                                                                          >  2:5799980/1‑140 (MQ=255)
  gCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGgaagaa                                                                                                                                        >  2:2654741/1‑140 (MQ=255)
   cTAATTAAATTTCACGCTTAATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATATGGCCTGTTGTACTAAAAAGCGATGATTTGCTTTGACAAACCCCTGGTCTTGAGCGAAAACATTCGAGGACGaaa                                                                                                                                      >  2:8128242/1‑140 (MQ=255)
      cTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaa                                                                                                                                  >  1:1631879/1‑140 (MQ=255)
        tAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaaaa                                                                                                                                >  1:1820128/1‑139 (MQ=255)
        tAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaaaa                                                                                                                                >  1:5276405/1‑139 (MQ=255)
        tAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaaaa                                                                                                                                >  2:3003614/1‑139 (MQ=255)
        tAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaaaa                                                                                                                                >  1:7168560/1‑139 (MQ=255)
        tAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTGTTGCGAAAACATTCGAGGAAGaaaaaaaa                                                                                                                                >  1:144645/1‑139 (MQ=255)
          aaTTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaaaaca                                                                                                                              <  2:3843219/140‑4 (MQ=255)
          aaTTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaaaaca                                                                                                                              <  1:655125/140‑4 (MQ=255)
          aaTTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaaaaca                                                                                                                              <  1:3476818/140‑4 (MQ=255)
            tttCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTACACATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaaaacagt                                                                                                                            <  2:7491491/140‑6 (MQ=255)
            tttCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaaaacagt                                                                                                                            <  2:7186338/140‑6 (MQ=255)
            tttCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGaaaaaaaacagt                                                                                                                            <  1:2328420/140‑6 (MQ=255)
            tttCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTCGCGAAAACATTCGAGGAAGaaaaaaaacagt                                                                                                                            <  1:8952071/140‑6 (MQ=255)
             ttCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTa                                                                                                                           >  2:1675849/1‑140 (MQ=255)
                ccGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGTCAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTc                                                                                                                        >  1:4389750/1‑140 (MQ=255)
                    tttATAATCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTGGACAATCCCCTGGTGTTTTGCGAATACATTCGTGGATGAAACAAAACAGTATTCTtat                                                                                                                    <  2:5226870/140‑1 (MQ=255)
                    tttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                    <  2:1822375/140‑1 (MQ=255)
                    tttATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                    <  2:1471804/140‑1 (MQ=255)
                    tttATAAGCCGATTAAATGAAGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTtat                                                                                                                    <  1:7382168/140‑1 (MQ=255)
                      gatccgCCGATTCACTGATGAATAAACGCCCCGGTTAATGAATATCTGGCAGGGTGTACTCACAATCGATGTTTTGCTTTGACACTCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTatat                                                                                                                  <  2:4984183/135‑1 (MQ=255)
                         aaGCCGATTAAATGATGACTAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTCTTCTTATATgcg                                                                                                               <  1:84010/140‑1 (MQ=255)
                          aGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATgcgc                                                                                                              <  1:7556341/140‑1 (MQ=255)
                           gCCTATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCa                                                                                                             <  1:5016471/140‑1 (MQ=255)
                           gCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCa                                                                                                             <  2:7810114/140‑1 (MQ=255)
                              gATTAAATGATGAATAAACGNCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAGACATTCGANGAAGAGANAAGACAGTATTCTTCTATGCGCagga                                                                                                          >  1:5523058/1‑137 (MQ=255)
                              gATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATaa                                                                                                          >  2:4548450/1‑140 (MQ=255)
                                ttAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACCGTATTCTTAGATGCGCATAccc                                                                                                        >  2:5532952/1‑140 (MQ=255)
                                ttAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTAtt                                                                                                                         <  1:3797640/123‑1 (MQ=255)
                                ttAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAAcc                                                                                                        >  1:9195021/1‑140 (MQ=255)
                                 tAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTANATGCGCATAACca                                                                                                       <  1:9100618/140‑1 (MQ=255)
                                   aaTTATGAATAAACGCCCCTGTTAATGAAGATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                     <  2:3172971/140‑1 (MQ=255)
                                   aaTGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                     <  2:1097116/140‑1 (MQ=255)
                                   aaTGACGAATCAACGCCCCTGTTAATGAATCTCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACACTCCCCTGGTGTTTAGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGAATAACcatg                                                                                                     <  2:863502/140‑1 (MQ=255)
                                     tgatgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAACTCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatgca                                                                                                   <  1:9461024/140‑1 (MQ=255)
                                     tgatgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCATTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatgca                                                                                                   <  1:4902291/140‑1 (MQ=255)
                                        tgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGt                                                                                                <  1:3122861/140‑1 (MQ=255)
                                        tgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGt                                                                                                <  2:3276783/140‑1 (MQ=255)
                                        tgaATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGt                                                                                                <  1:2213632/140‑1 (MQ=255)
                                          aaTAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATTGTTTGCCTTGTCAATCCCCGGGTGTTTTGCGTAAACATTCGAGGCAGCAAAAAAACAGTAATCGTATATGCGCATAACCATGCATGGaa                                                                                              >  2:4380512/1‑140 (MQ=255)
                                          aaTAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGTAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTaa                                                                                              >  2:4165576/1‑140 (MQ=255)
                                          aaTAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTaa                                                                                              >  1:4190325/1‑140 (MQ=255)
                                            tAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAACATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAACAAAAACAGTATTCTTATATGCGCATACCCATGCATGTAAAt                                                                                            <  2:7714718/140‑1 (MQ=255)
                                              aaCGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATAc                                                                                          <  1:6884096/140‑1 (MQ=255)
                                                      tGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTa                                                                                  >  2:7011306/1‑140 (MQ=255)
                                                      tGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTa                                                                                  <  2:506987/140‑1 (MQ=255)
                                                      tGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTa                                                                                  <  2:20850/140‑1 (MQ=255)
                                                         tAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCg                                                                               <  2:6331567/140‑1 (MQ=255)
                                                             gAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCt                                                                           >  1:6255794/1‑140 (MQ=255)
                                                               atatCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                     <  1:8819415/112‑1 (MQ=255)
                                                               atatCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACcatg                                                                                                     >  2:8819415/1‑112 (MQ=255)
                                                                tatCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGTAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGGAAATACCATGTTTACCGTGCTAGt                                                                        >  1:4583877/1‑140 (MQ=255)
                                                                tatCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTCTTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGt                                                                        >  2:1271234/1‑140 (MQ=255)
                                                                 atCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTg                                                                       <  2:9415029/140‑1 (MQ=255)
                                                                  tCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGa                                                                      >  2:6088728/1‑140 (MQ=255)
                                                                  tCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGa                                                                      >  1:771934/1‑140 (MQ=255)
                                                                  tCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAATCAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGa                                                                      >  2:828776/1‑140 (MQ=255)
                                                                  tCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACAATCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTACATACAATGTTTACCGTGCTAGTGa                                                                      >  1:5912222/1‑140 (MQ=255)
                                                                     ggCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAAt                                                                   >  1:11570/1‑140 (MQ=255)
                                                                          gttgtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACg                                                              >  2:6789116/1‑140 (MQ=255)
                                                                            tgtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTaa                                                                                              >  2:4024615/1‑106 (MQ=255)
                                                                             gtACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTAt                                                           >  1:1008341/1‑140 (MQ=255)
                                                                              tACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATg                                                          >  2:5648781/1‑140 (MQ=255)
                                                                                cTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGc                                                        >  2:5461621/1‑140 (MQ=255)
                                                                                 tcaaaaTCGATGTTTTGCTTTGACACTCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCg                                                       <  1:8328845/138‑1 (MQ=255)
                                                                                 tAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCg                                                       <  1:2761049/140‑1 (MQ=255)
                                                                                 tAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCg                                                       <  1:6732081/140‑1 (MQ=255)
                                                                                     aaTCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGa                                                   >  1:250221/1‑140 (MQ=255)
                                                                                     aaTCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGa                                                   <  1:3996852/140‑1 (MQ=255)
                                                                                      aTCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGAc                                                  >  1:108803/1‑140 (MQ=255)
                                                                                          aTGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGAc                                              >  2:9255027/1‑140 (MQ=255)
                                                                                                   tttGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGt                                     <  2:3697691/140‑1 (MQ=255)
                                                                                                    ttGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTg                                    <  1:3287653/140‑1 (MQ=255)
                                                                                                    ttGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTg                                    <  2:9087175/140‑1 (MQ=255)
                                                                                                           tCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAACAAAACACTATTCTTATATGCGCAGAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGa                             <  1:5750682/140‑1 (MQ=255)
                                                                                                            ccccTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGAt                            >  1:6014168/1‑140 (MQ=255)
                                                                                                            ccccTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGAt                            >  2:3569222/1‑140 (MQ=255)
                                                                                                               cTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGc                         <  1:4033973/140‑1 (MQ=255)
                                                                                                               cTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGAGATGTCGATAGc                         <  1:1480112/140‑1 (MQ=255)
                                                                                                                 ggTGTTTTGCGAATACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATACCCATGCATGTCAATACCCTGGTTACCGTGCTAGTGAAATCTACGTCTGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTg                       >  2:2376421/1‑140 (MQ=255)
                                                                                                                 ggTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTg                       >  1:659456/1‑140 (MQ=255)
                                                                                                                 ggTGTTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCAGGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATGCGGGATGTCGATAGCTg                       >  1:9374303/1‑140 (MQ=255)
                                                                                                                  gtgtTTTGCGAAAACATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCAGGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGc                      >  2:7060729/1‑140 (MQ=255)
                                                                                                                             caaCATTCGACGAAGAAAAAAACCAGTATTCTTAGATGCGCATAACCCCGCATGTAAATACCATGTTTACCGTGCTAGTGAACTCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAAc           <  1:7237390/139‑1 (MQ=255)
                                                                                                                             aaaCATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCCTGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAAc           <  1:8159465/140‑1 (MQ=255)
                                                                                                                             aaaCATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAAc           <  1:7067971/140‑1 (MQ=255)
                                                                                                                             aaaCATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAAc           <  1:6133498/140‑1 (MQ=255)
                                                                                                                             aaaCATTCGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAAc           <  1:8572500/140‑1 (MQ=255)
                                                                                                                             aaaCATTCGAGCAAGAAAAAAAACAGTCTCCTTAAATGCGCCTAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAAc           <  1:7971308/140‑1 (MQ=255)
                                                                                                                                    cGAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGtcttc    >  1:3227179/1‑140 (MQ=255)
                                                                                                                                    cGAGGAAGAAAAAAAACAGTATTCTTATATGCGCAGAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGtcttc    <  1:2576586/140‑1 (MQ=255)
                                                                                                                                     gAGGAAGAAAAAAAACAGTATTCTTATATGCGCATAACCACGCATGTAAAGACCATGATTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGtcttct   <  1:5128242/140‑1 (MQ=255)
                                                                                                                                     gAGGAAGAAAAAAAACAGTAGTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGtcttct   <  2:2451347/140‑1 (MQ=255)
                                                                                                                                      aGGAAGAAAAAAAACAGTATTCTTATCTGCGCATCACCATGCATGTAAATACCATGGTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACACGGCAACGGTCTtctc  <  2:2806873/140‑1 (MQ=255)
                                                                                                                                            |                                                                                                                                         
CTGCTACTTAAATTTCCCGCTTTATAAGCCGATTAAATGATGAATAAACGCCCCTGTTAATGAATATCTGGCATGTTGTACTAAAAATCGATGTTTTGCTTTGACAATCCCCTGGTGTTTTGCGAAAACATTCGAGGAAGAAAAAAACAGTATTCTTATATGCGCATAACCATGCATGTAAATACCATGTTTACCGTGCTAGTGAAATCTACGTATGGCGTGGACAGACGCCATTCGTGATGTCGATAGCTGCCACAAGGCAACGGTCTTCTC  >  NZ_CP025268/939300‑939572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: