| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,374,862 | (T)8→9 | intergenic (+40/‑172) | pspE → / → ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,374,854 | 1 | . | T | 92.3% | 1148.6 / 94.4 | 407 | intergenic (+32/‑180) | pspE/ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Reads supporting (aligned to +/- strand): ref base . (19/11); new base T (177/184); total (196/211) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.12e-01 | |||||||||||
Only 100 of 438 total aligned reads displayed.
GGACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGT > NZ_CP025268/1374715‑1374993 | ggACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGGTATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCg > 1:8121253/1‑140 (MQ=255) gACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑t > 2:7928293/1‑140 (MQ=255) gTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑t‑ttt‑tt‑t‑t > 1:2215051/1‑140 (MQ=255) gTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑t‑ttt‑tt‑t‑t > 2:645450/1‑140 (MQ=255) gTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑t‑ttt‑tt‑t‑t > 2:8110205/1‑140 (MQ=255) ggCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑t‑ttt‑tt‑t‑ttctgt < 1:1628163/140‑6 (MQ=255) ggCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑g‑ttt‑tt‑t‑ttatgt > 1:7568542/1‑135 (MQ=255) ggCAAGCAAAAGAGAGCCTTAGCGAGATGGGCTATACCCACGTTGAGAACGCCGGTGGCCTGAACGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑T‑TTT‑TT‑T‑TCTGTc < 2:8518033/140‑1 (MQ=255) ggCAAGCAAAACATATCCTTAGCGAGATGGGATATACCCACGTTGAGACCGCCGGTGGCCTGAAAGACATCGAACTGCCGAAGGTCAAAGGTTAAAATAATTCACCATGAGCGGAGCTTATGCGCCT‑‑t‑ttt‑tt‑t‑ttctgt < 2:9045720/140‑6 (MQ=255) gcaagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTc < 2:2151959/140‑1 (MQ=255) aagcaaACGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTcac < 2:4412307/140‑1 (MQ=255) aagcaaAAGATATCCTTAGCGATATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTcac < 1:4765852/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTcac < 1:1199930/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTcac < 1:5413309/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTcac < 1:2729198/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTca < 2:6570696/139‑1 (MQ=255) aagcaaAAGAGAGCCTTAGCGAGATGGGATCTCCCCACGTTGAAAACGCCGGTGGCCTGAACTAAATCGCAATGCCGAAGGTCACAGGTTAAACGAATACACCATGAGCGGCGCTAATGCGCCG‑‑T‑TTT‑TTAT‑TCTGTcac < 2:3390514/140‑1 (MQ=255) gcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCacac > 1:9469772/1‑140 (MQ=255) gcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TATGTCacac > 1:5160150/1‑140 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGCGACCGCCGGTGGCCTTAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTAATGCGCCGA‑T‑TTT‑TT‑T‑TCTGTCACAcc < 2:2855655/140‑1 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACAcc < 2:1201715/140‑1 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACAcc > 1:9261711/1‑140 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACAcc < 1:8852960/140‑1 (MQ=255) aaaGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCtt < 2:5599112/140‑1 (MQ=255) aaaGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCtt < 2:2225978/140‑1 (MQ=255) gaTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTa < 2:2716065/140‑1 (MQ=255) caTCCTTAGCGAGATGGGATATACCCACGTTGAGACCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTa < 1:8300671/139‑1 (MQ=255) agccTTCGCGAGATGGGATATACCCCCGTGGACCCCGCCGGTGGCCTGAAACACATCGCAATGCCGAAGGTCACAGGTTAACAGAATTCACCATGAGCGGCGCTTATGCGCCGA‑T‑TTT‑TT‑T‑TCTGTCCCACCTTATTTAc < 2:6980246/138‑1 (MQ=255) aTCCTTAGCGAGATGGGATATTCCCAAGATGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCAACATGAGCGGCGCTTTTGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTAc < 2:8970991/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACa < 2:316389/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACa < 2:2388911/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACa > 2:731796/1‑140 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACa < 1:3428813/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCAGGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACa < 2:7788934/140‑1 (MQ=255) tCCTTAGCGAGAGGGGATATACCCACGTTGAGACCGCCGGTGGCCTGAAAGACATCGCAATGCCGATGTTCAATGGTTAAAAGAATTCACCATGAGCGGCGATTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACa < 2:9261817/140‑1 (MQ=255) cTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGGTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGGCACACCTTATTTACATc > 1:1064740/1‑140 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGa < 2:8661182/140‑1 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGa < 1:7457824/140‑1 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGat > 2:1810810/1‑140 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TATGTCACACCTTATTTACATCCCCAtctat > 1:2911181/1‑136 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑T‑TTT‑TT‑T‑TCTGTCACACCTTAGTTACATCCCCATAGatt > 2:3991504/1‑140 (MQ=255) tGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGatt > 2:5055333/1‑140 (MQ=255) taCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCg > 1:6832280/1‑140 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCt < 1:73403/112‑1 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGt > 2:3869999/1‑140 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGt < 2:4242801/140‑1 (MQ=255) aCGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGc > 1:7117390/1‑140 (MQ=255) aCGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTAAATCCCCATAGATTATTTGCGTCAGc > 1:366490/1‑140 (MQ=255) aCGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCATATTTACATCCCCATAGATTATTTGCGTCAGc > 2:9382066/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTGACACCGTATTTACATCCCCCTAGATTAGTTTCGTCAGcg > 1:7904692/1‑139 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCGTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCGTATTTACATCCCCCTAGATTATTTTGGTCAGcg > 1:566529/1‑139 (MQ=255) ttGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGTTT‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTc > 2:8260207/1‑140 (MQ=255) ttGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCGTATTTACATCCCCATAGATTATTTGCGTCAGCTca > 1:8602426/1‑140 (MQ=255) gagaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TATTTGACACCGTATTTACATACCCAAAGATTATTTGCGTCAGcaaaca > 2:1059957/1‑135 (MQ=255) agaACGCCGGTGGCCTGAAAGACATCGCATTGCCGAAGGTCATAGGTTAATAGACTTCACCAGGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATGTATTATTTGCGTCAGCTCACaa > 1:2540295/1‑140 (MQ=255) agaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACaa > 2:7342102/1‑140 (MQ=255) agaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑TGTTT‑TT‑T‑TCTGGGCCCCCATTTTTACATCCCCCTGGGTTAGTTGCGGCAgggcccca > 1:338289/1‑133 (MQ=255) aaCGCGGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAAt < 2:6312180/140‑1 (MQ=255) aaCGCCGGTGGCCTGAAAGTCATCGCCATGCCGAAGGTCAACGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACaatt < 2:2619259/140‑3 (MQ=255) aaCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTTCGTCAGCTCACAAAt > 1:8405286/1‑140 (MQ=255) cGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATAc < 1:4977763/140‑1 (MQ=255) ccGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCCTAGATTATTTGCGTCAGCTCACAAATACGc > 2:9447191/1‑140 (MQ=255) ccGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCGTATTTTCATACCCATAGATTATTTGCGTGAGCTCAAAAATACGc > 1:8962148/1‑140 (MQ=255) cGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTAAATCCCCATAGCTTATTTGCGTCAGCTCACAAATACGCt > 1:6602905/1‑140 (MQ=255) tGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCtttt > 2:4646978/1‑140 (MQ=255) tGGCCTGAAAGACATCGCAATGCCGAAGGTAAAAGTTTAAAAGAATTCACCATGTTCGGCGCTTATGAGCCG‑‑T‑TTTGTT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGAGTCAGCTAACAAATAAGCtttt > 2:3003220/1‑140 (MQ=255) tGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTGACACCGTATTTACATACCCCTAGATTATTTGCGGCAGCTAACAAATACGCTTTGTcccg > 1:6460006/1‑139 (MQ=255) tGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCCCACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCt > 1:4522849/1‑140 (MQ=255) aaGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCGTATTTACCTCCCCATAGATTGTTGGCGTCAGGTCACCAATACGCTGGTTCCGTGGt > 1:7684102/1‑140 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaa > 2:7667412/1‑140 (MQ=255) tCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTTTTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTaaaaaa > 1:1718943/1‑140 (MQ=255) gCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTc < 2:5454000/140‑1 (MQ=255) aGGTCAAAGTTTAAAATAATTCACAATGAGCGGCGATTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 2:681332/140‑1 (MQ=255) aGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGA‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 1:7725423/140‑1 (MQ=255) aGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGATTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 2:5320124/140‑1 (MQ=255) aGGACAAAGGTTAAAAGAATTCCCCCTGAGCGGCGCTTATGCGCCG‑‑T‑TTT‑TT‑TGTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATGTCCTGCg < 2:5931862/140‑1 (MQ=255) cAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGA‑T‑TAT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTGTCCCTGGTAAAAAATGATTTCCTGCGTGAc < 1:8032977/140‑1 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTTCGttaata > 2:6021243/1‑135 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TATGTCACACCGTATTTAAATCCCCATAGATTATTTGCGGCAGCGCACAAATACGCTTTTTCCCTGGTTAAAAATGATTTCCTGCGTGTCTa > 1:409873/1‑140 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TATGTCACACCATATTTAAATCCCCCTAGATTATTTTCGTCAGCTCACAAATAAGCTTTTTCCCTGGTAAAAAATTATTTCCTGCGTGACTa > 1:4398075/1‑140 (MQ=255) aGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAACTACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTaa < 1:7275846/140‑1 (MQ=255) gTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTaaaa < 2:1069595/140‑1 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAAccc > 2:6884426/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCCTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAAccc > 2:1397799/1‑140 (MQ=255) aaGAATTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCtt < 1:5339849/140‑1 (MQ=255) aTTCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGc < 1:3973380/140‑1 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCGTTT‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGc > 2:1673420/1‑140 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCCTAGATTTTGTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTGAAAAATGATTTCCTGCGGGGCGAACACCCGTGTGcg > 1:5852728/1‑139 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TATGTCACACCTTATTTAAAACCCCAAATATTATTTTCGTCAGCTAACAAATACGCTTTTTCCCATGTAAAAAAATATTTACTGCGTGAAAAAAAACCATGTGCt > 1:7424965/1‑140 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TATGTCACACCATAATTAAAACCCAATATATTATTTGCGTCAGCTAACAAAAAAGCGTTTTACAAGGTAAAAAATTATTTTCTGAGTGAATAAAAACCGtgtgag > 1:6431734/1‑138 (MQ=255) ttCACCATGAGCGGCGCTTATGCGCCG‑‑T‑TTT‑TT‑TGTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTAAGCTCACAAATACGCTTTTTCCCTGGCAAAAAATGATTTACTGCGTGACTAAAACCCGtgtgag > 1:6203234/1‑138 (MQ=255) ttCACCATGAGCGACGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TATGTCACACCGTATTTACATCCCCATAGATTATTTGCGTCAGCTCAAAAATAAGCTTTTTACCAGGTAAAAAATGATTTACTGCGTGACTAAAACCCATGTGCt > 1:9107239/1‑140 (MQ=255) aTGAGCGGCGCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTg < 1:3072694/140‑1 (MQ=255) aGCGGCGCTTATGCGCCGTTT‑TTT‑TT‑T‑TATGTCACACCTTATTTACAACCCCAAATATTATTTGCCTCAGCACAAAAATACGCATTTTACCAGGTAAAAAATTATTTACAGCGTGTCAAAAAACCTTTTGCTCAATTTAc > 1:1535725/1‑140 (MQ=255) cggcgCTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGt < 2:3784301/140‑1 (MQ=255) gcgcTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTAACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATTATTTCCTGCGTGACTAAAAACCTTGTGCTCAATTGACAGttt > 2:414793/1‑140 (MQ=255) cTTATGCGCCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTAtt < 2:2060180/140‑1 (MQ=255) gcgcCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTg < 1:3260005/140‑1 (MQ=255) gcgcCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTg < 1:2015876/140‑1 (MQ=255) cgcCGT‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGc < 2:7603972/140‑1 (MQ=255) | GGACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCCG‑‑T‑TTT‑TT‑T‑TCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACAAATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGCGGAGT > NZ_CP025268/1374715‑1374993 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |