| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,690,360 | (C)5→6 | pseudogene (1047/1403 nt) | fumC ← | class II fumarate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,690,355 | 1 | . | C | 98.3% | 2205.7 / 24.8 | 643 | pseudogene (1052/1403 nt) | fumC | class II fumarate hydratase |
| Reads supporting (aligned to +/- strand): ref base . (6/5); new base C (287/343); total (294/349) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 696 total aligned reads displayed.
TTCGCTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCG‑C‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGATTTCACCA > NZ_CP025268/1690216‑1690489 | tctcTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAgcg‑c < 1:9314918/137‑1 (MQ=255) tCGCTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAgcg‑c < 2:6138905/140‑1 (MQ=255) tCGCTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAgcg‑c < 2:674491/140‑1 (MQ=255) gCTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCATCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACTTTCAGTTCAAAGTTACCGGAAGCG‑c‑c‑c < 1:2596781/140‑1 (MQ=255) gCTCACGAGTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCG‑c‑c‑c < 2:4289266/140‑1 (MQ=255) cTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCG‑c‑c‑cc > 2:2173578/1‑140 (MQ=255) gATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCG‑c‑c‑ccccatg > 1:3532363/1‑136 (MQ=255) ttCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCCTGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGtt < 1:6704928/140‑1 (MQ=255) ggTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGAt > 1:1282368/1‑140 (MQ=255) ggTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGAt < 2:5623159/140‑1 (MQ=255) ggTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGAt > 1:2888365/1‑140 (MQ=255) gTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATc > 2:267114/1‑140 (MQ=255) tACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCAcg > 1:1020334/1‑140 (MQ=255) tACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCAcg > 2:1497911/1‑140 (MQ=255) aCTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGATGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGACACGTCGtt > 1:196781/1‑140 (MQ=255) aCTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGtt > 1:2135981/1‑140 (MQ=255) gcgcCGTGTTGGATAAAACTTTCCCTGCCATCTGCCAGCAAGCGCACCGATGGCCGGAAATTGAGGATCACAATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATTTTGATCGCCACGTCGTTcca < 2:6365796/140‑2 (MQ=255) gcgcAGTGTTTGTTAATACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTccc > 2:8435482/1‑140 (MQ=255) gcgcAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTccc > 2:812438/1‑140 (MQ=255) gcgcAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTccc > 2:8882691/1‑140 (MQ=255) gcgcAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTccc > 1:2417546/1‑140 (MQ=255) gcgcAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGAACGCCACGTCGTTccc > 1:7119502/1‑140 (MQ=255) cgcAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTcccc > 1:8580387/1‑140 (MQ=255) cAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCAt < 1:8430215/140‑1 (MQ=255) cAGTGTTTGTTAAAACTGTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCAt < 1:2035946/140‑1 (MQ=255) gtgtTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGACGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCa > 1:4642929/1‑140 (MQ=255) gtgtTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCa < 2:5076671/140‑1 (MQ=255) gtgtTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCa < 2:5181968/140‑1 (MQ=255) gtgtTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCa < 2:6021863/140‑1 (MQ=255) gtgtTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCa < 2:926010/140‑1 (MQ=255) tgtttgttAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCAc > 2:3049368/1‑140 (MQ=255) gtttgttAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCAcc < 2:2416336/140‑1 (MQ=255) tttgttAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCt < 1:3880006/140‑1 (MQ=255) tttgtcACAACTCTCCCTGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCt < 1:9054343/140‑1 (MQ=255) ttAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAca < 1:8066799/140‑1 (MQ=255) tAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcag < 1:6188930/140‑1 (MQ=255) tAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcag < 2:6621035/140‑1 (MQ=255) aaaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcagca < 1:4894214/140‑1 (MQ=255) aaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcagcag > 2:4714247/1‑140 (MQ=255) aaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcagcag > 1:5668325/1‑140 (MQ=255) aaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcagcag > 1:5300795/1‑140 (MQ=255) aaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcagcag > 2:705843/1‑140 (MQ=255) aaCTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGAcagcag > 2:8344256/1‑140 (MQ=255) tttCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGACATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGc < 2:8804226/140‑1 (MQ=255) tttCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGc < 2:7404808/140‑1 (MQ=255) tttCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGc < 1:9192283/140‑1 (MQ=255) ttCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCa > 1:1600615/1‑140 (MQ=255) tCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCAt > 2:3218542/1‑140 (MQ=255) ccATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATg > 2:8039239/1‑140 (MQ=255) ccATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATg < 1:6849149/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGTAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 2:9035979/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 1:7908736/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 1:3310069/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 1:3026362/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTa < 2:8630502/140‑1 (MQ=255) gCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGGTCCCCATCACCTGACAGCAGAGCATGGTTa < 2:2097673/140‑1 (MQ=255) cATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAAt < 2:3371868/140‑1 (MQ=255) cTGCCAGCAAGCTCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCTCCTGACAGCAGAGCATGGTTAATGcc < 1:5066218/140‑1 (MQ=255) cTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGcc > 2:1734024/1‑140 (MQ=255) cTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGcc < 1:7301260/140‑1 (MQ=255) cTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGcc < 2:6495418/140‑1 (MQ=255) aGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTcaca < 2:4938880/140‑1 (MQ=255) aGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTcaca < 1:3645906/140‑1 (MQ=255) aGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTcaca < 2:3525541/140‑1 (MQ=255) aGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTcaca < 1:3752890/140‑1 (MQ=255) gCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCacac < 2:2774773/140‑1 (MQ=255) cAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACt > 1:2230288/1‑140 (MQ=255) cAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCG‑CAC‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACt < 2:1352046/140‑1 (MQ=255) aGCGCACCGATTGCAGGAAATTGTGGATCAGCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGACGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACtgt > 2:5397356/1‑140 (MQ=255) cgcACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGGTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTgtgt < 2:1183075/140‑1 (MQ=255) cACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCt < 1:4042480/104‑1 (MQ=255) cACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTg > 1:8873746/1‑140 (MQ=255) cGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGt < 1:4787946/140‑1 (MQ=255) cGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGt < 1:8336338/140‑1 (MQ=255) cGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGt < 2:2571985/140‑1 (MQ=255) gCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACt > 1:4226820/1‑140 (MQ=255) aaaTTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTTCCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTccc < 1:6560955/140‑1 (MQ=255) aTTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCg > 1:3078200/1‑140 (MQ=255) ttGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGGTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCgg < 2:4063218/140‑1 (MQ=255) gtgtgGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCAGCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCgg < 2:4553207/139‑1 (MQ=255) tgtgGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGc < 2:3762072/140‑1 (MQ=255) gtgGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCa < 2:7183074/140‑1 (MQ=255) gACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGccc < 1:744333/140‑1 (MQ=255) cGGAAGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCgg > 1:2730074/1‑140 (MQ=255) aaGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCa < 2:682664/79‑1 (MQ=255) aaGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTc > 1:5866094/1‑140 (MQ=255) aaGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTc > 1:6427075/1‑140 (MQ=255) aaGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTc > 1:4556833/1‑140 (MQ=255) aGACGTTCAGTTCAAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCa < 2:2936072/140‑1 (MQ=255) tcagttcaAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTcc < 1:2341960/140‑1 (MQ=255) gttcaAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCggg > 1:1657132/1‑140 (MQ=255) gttcaAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCggg > 1:8990046/1‑140 (MQ=255) gttcaAAGTTACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCAGTTTCCggg > 1:8737220/1‑140 (MQ=255) ttACCGTTAGCG‑C‑CACCCATGTTGATCCCCTCGTCGTTCCCCATCACCTGACTGCAGAGCATTGTTAATGCCTCTCACTGTGTTGGGTTCACTTTCCACGCCATGATTGAGCTGCCCGGCTCATTTTACGGGATTGCGAt < 2:3887269/140‑1 (MQ=255) ttACCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGAt < 2:750940/140‑1 (MQ=255) ttACCGGAAGCGCC‑C‑CCCATGATGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGAt < 1:3816952/140‑1 (MQ=255) aCCGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGAttt > 1:8171542/1‑140 (MQ=255) ccGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCCTCACCTGACAGCAGAGCATGGTTAATGCCTCACACGGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGATTTc > 2:769858/1‑140 (MQ=255) ccGGAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGATTTc > 1:546168/1‑140 (MQ=255) gAAGCGCC‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGATTTCAcc > 1:947106/1‑140 (MQ=255) | TTCGCTCACGATTCGGTTCAATACCCACTGCGCAGTGTTTGTTAAAACTTTCCATGCCATCTGCCAGCAAGCGCACCGATTGCAGGAAATTGTGGATCACCATTGGACGGAAGACGTTCAGTTCAAAGTTACCGGAAGCG‑C‑C‑CCCATGTTGATCGCCACGTCGTTCCCCATCACCTGACAGCAGAGCATGGTTAATGCCTCACACTGTGTTGGGTTCACTTTCCCCGGCATGATTGAGCTGCCCGGCTCATTTTCCGGGATTGAGATTTCACCA > NZ_CP025268/1690216‑1690489 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |