| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,701,269 | +A | intergenic (‑380/+10) | uidA ← / ← uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,701,265 | 1 | . | A | 90.8% | 2170.1 / 189.4 | 626 | intergenic (‑376/+14) | uidA/uidR | beta‑glucuronidase/DNA‑binding transcriptional regulator UidR |
| Reads supporting (aligned to +/- strand): ref base . (28/29); new base A (259/305); total (291/335) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.77e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 637 total aligned reads displayed.
AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAA > NZ_CP025268/1701126‑1701399 | ttGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑a‑aa‑aag > 1:4478791/1‑138 (MQ=255) ggAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑Aa‑a‑‑agaga < 1:8414625/140‑1 (MQ=255) ggAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑Aa‑a‑‑agaga < 2:7041907/140‑1 (MQ=255) aaCGATAAACTCTCATGACATATGGCTCCAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AA‑a‑‑agagaga > 1:3509094/1‑140 (MQ=255) aaCGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AA‑a‑‑agagaga > 2:8753087/1‑140 (MQ=255) gATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGaa > 1:6333965/1‑140 (MQ=255) aTAAACTCTCATGNCATATGGCTACAGTGAATATTGTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGACATTACGATCTGAAACGCGGGCACAGTTATCNCCAGCCCGCCG‑A‑AA‑ATgagagagact > 1:5541339/1‑138 (MQ=255) aTAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGaaa > 2:4079149/1‑139 (MQ=255) aCTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAgg > 2:4583354/1‑140 (MQ=255) ctctCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGa < 1:371103/140‑1 (MQ=255) ctctCATGACATATGGCTACAGTGAAGATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTGTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGa < 2:7762258/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGAt < 1:1160649/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGAt < 1:9550655/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGAt < 2:5240630/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGAt < 2:6320296/140‑1 (MQ=255) tctcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTATCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGATATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGAt > 2:8325498/1‑140 (MQ=255) tcATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGc < 1:4678394/140‑1 (MQ=255) tcATGACATATGGCTACAGTGAATATTGTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGc < 2:1245361/140‑1 (MQ=255) taaTGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAATCGCGGGCACAGTTATCACCAGCCCGCCG‑ACAA‑A‑GAGAGAGAATCAGGATGc < 2:1729385/138‑1 (MQ=255) aCATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTa < 1:9191827/140‑1 (MQ=255) cATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTaa < 1:737184/140‑1 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGa > 1:5114187/1‑140 (MQ=255) tatGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGa < 1:1005215/140‑1 (MQ=255) tGGCTACCGTGAAGATTTAGGGGGGCATTCTCCGAAGCCGGGAAGGATAATTATTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCCGCCCGCCG‑ACCA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa < 1:8723340/140‑1 (MQ=255) tGGCTACAGTGACTATTTTGGGGGGAAATCTCCGAAGCCGGGAAGGATAATATTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa > 2:8889046/1‑140 (MQ=255) tGGCTACAGTGAATCTTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa < 2:9235104/140‑1 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGACGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa > 2:4386692/1‑140 (MQ=255) tGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑TAGAGAGAATCAGGATGCGGTTAAtata < 1:6121369/140‑1 (MQ=255) tGGCTACAGTGAATAGTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGAGATGAAACGCGGGCACAGTTATCACAAGCCCGCCG‑ACAG‑A‑GAGAGAGAATCAGGATGCGGTTAAGATa > 2:3658048/1‑140 (MQ=255) gCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACTCGGGCACAGTTATCACCAGCCCGACGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATaac > 2:229891/1‑138 (MQ=255) cAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCa > 1:3859359/1‑140 (MQ=255) cAGAGAAAATTTTGGGGGGAATTCTCCGAAGAAGGGAATGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGTGCACAGTTCTCACAAGACCGCAGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCa > 2:9437217/1‑140 (MQ=255) aGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATAGGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGACTCAGGCGGCGGGGAAGATCCCGCCac > 1:6607700/1‑139 (MQ=255) tGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatc > 2:1381479/1‑140 (MQ=255) tGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatc > 1:5402579/1‑140 (MQ=255) gAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatca > 1:3051356/1‑140 (MQ=255) aaTATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAatcat > 1:3928691/1‑140 (MQ=255) gagtttGGGGGGAATTCTCCGAAGCCGGGAAGGATAATGCTTGCACAGAGAAATTACGATTTGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AA‑ACGAGTGAGATTCAGGATGCGGTTAAGATACCGCCATTCATcg < 2:6200492/137‑1 (MQ=255) ttGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGACTCAGGATGCGGTTAAGATACCGCCAATCATcgcgcg > 1:7863177/1‑140 (MQ=255) ttgggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGTGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGt < 2:738452/138‑1 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt > 1:2917457/1‑140 (MQ=255) ggggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAt < 2:3965305/140‑1 (MQ=255) ggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGATAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATcc < 1:5612510/140‑1 (MQ=255) ggAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATcc > 2:1130570/1‑140 (MQ=255) aaTTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCt < 1:4348593/140‑1 (MQ=255) aaTTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCACAGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACAGACAATCATCGCGCGTAATACCt > 2:6103574/1‑140 (MQ=255) aGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAacga > 1:3207859/1‑140 (MQ=255) aGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCAc < 2:1834546/140‑1 (MQ=255) gATAATTTTTGCACAGAGAAATTACGATATGAACCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCAcgc < 1:2748523/140‑1 (MQ=255) tAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACgcgc > 1:2576846/1‑140 (MQ=255) tAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACgcgc < 1:1312245/140‑1 (MQ=255) tAATTTTTGCACAGAGAAATAACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACgcgc > 2:5074402/1‑140 (MQ=255) aaTTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGcc < 1:5036054/140‑1 (MQ=255) gCACCGAGAAATTACGATAGGAAACGCGGGCACAGTGATCCCCCGCCCGCCGCA‑AA‑A‑GAGAGAGAATCAGGATGCGGTGAAGATACCGCCAATCATCGCGCGTTAGCCGTGAGCACACGACGCTTCACGCGCCAGGTCtg > 2:7264993/1‑139 (MQ=255) gCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCtt < 1:1571576/140‑1 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc < 2:6866621/140‑1 (MQ=255) cacaGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTc < 2:3524232/140‑1 (MQ=255) agagAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGACTCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTCAGCAAACGACGCTTCACGCGCCAGGTCTTCCGc < 1:2474525/140‑1 (MQ=255) gagaAATTACGATCTGCAACGCGGGCACAGTTATCCCCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCACTCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGcg > 2:812330/1‑139 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 2:3817059/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 2:751890/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt < 2:85673/140‑1 (MQ=255) agaAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCtt > 1:9381823/1‑140 (MQ=255) ttACGCTATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:2074198/140‑1 (MQ=255) ttACGATATGAACCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 1:896682/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:8470981/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:1553016/140‑1 (MQ=255) ttACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGata < 2:5300029/140‑1 (MQ=255) aCGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATc < 2:3133518/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGTATAAGATACCGCCAATCATCGCGCGTAATCACTGAGCAAACGACGCTTCACGCGCCAGGTCTTACGCTTCGATATCGGc > 2:4772835/1‑140 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:2832664/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:2263326/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 2:6573188/140‑1 (MQ=255) atatGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc < 1:7643538/140‑1 (MQ=255) atGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCt < 1:4714410/92‑1 (MQ=255) atGAAACGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCa < 1:4912063/140‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTACTCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 1:6722685/140‑1 (MQ=255) aaaCGCGGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:2656974/140‑1 (MQ=255) cgcgGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTacac > 1:7774010/1‑140 (MQ=255) cgGGCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCg < 1:2018006/140‑1 (MQ=255) cgGGCACAGTTATCACCAGCCCGCCG‑A‑AACA‑GAGAGAGAATCAGGATGCGGTTACGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCGTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCg < 1:4099444/140‑1 (MQ=255) gggCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAAGCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGt < 2:4252055/140‑1 (MQ=255) gCACAGTTATCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAg > 1:6865475/1‑140 (MQ=255) aTCACCAGCCCGCCG‑A‑AA‑ACGAGGGAGTCTCAGGATGCGGGTAAGATACCGCCAAGCATCGCGCGTACTCCCTGAGCAACCGACGCTTCACGCGCCAGGTCTTCCGCGTCGATCTCGGCCAGTACACCGTAGGTCAGATc > 2:790014/1‑140 (MQ=255) tCACCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATcc < 1:8268695/140‑1 (MQ=255) aCCAGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcag < 2:4497675/140‑1 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:5399085/118‑1 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTa < 2:5524086/118‑1 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 1:724918/1‑140 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 2:5701314/1‑140 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag < 1:5754934/140‑1 (MQ=255) aGCCCGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCcagcag > 2:645066/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCCGGTCTTCCGCTTCGATATCGGCCAGTACACCGTCGGTCAGATCCAGCAGtc > 1:8177674/1‑139 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGc > 1:8492058/1‑111 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:5943582/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:1783419/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:8048684/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 1:864099/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTa > 2:6714980/1‑140 (MQ=255) cccGCCGAA‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGGAGGTCAGATCCAGCAGTa > 2:3338224/1‑140 (MQ=255) | AGCGTATTGGGAACGATAAACTCTCATGACATATGGCTACAGTGAATATTTTGGGGGGAATTCTCCGAAGCCGGGAAGGATAATTTTTGCACAGAGAAATTACGATATGAAACGCGGGCACAGTTATCACCAGCCCGCCG‑A‑AA‑A‑GAGAGAGAATCAGGATGCGGTTAAGATACCGCCAATCATCGCGCGTAATCCCTGAGCAAACGACGCTTCACGCGCCAGGTCTTCCGCTTCGATATCGGCCAGTACACCGTAGGTCAGATCCAGCAGTAAA > NZ_CP025268/1701126‑1701399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |