| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,826,683 | (A)7→8 | intergenic (‑247/+51) | chbB ← / ← osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,826,676 | 1 | . | A | 93.0% | 2289.8 / 138.8 | 631 | intergenic (‑240/+58) | chbB/osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Reads supporting (aligned to +/- strand): ref base . (37/7); new base A (410/176); total (448/183) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.71e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 635 total aligned reads displayed.
GCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826541‑1826810 | gCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑a‑ata > 2:4014536/1‑138 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATCATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCg > 2:6438354/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCg > 2:2889199/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCg > 1:8176323/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTCTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGACCTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGt > 2:420157/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGt > 2:9381308/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGt > 1:7058632/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGt > 1:6312280/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGttt > 1:7216579/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGttt > 1:1256200/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGttt > 1:4104428/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑AAAA‑AATCCGGCGCAATGGCCGGttt > 1:2593673/1‑140 (MQ=255) ccTGAGCAAGAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTc < 1:6905705/140‑1 (MQ=255) atcAATAGTATTTCTTTGACCATATAAATTGTTTCTACTTGACCTGTGGTTATGACCCTCTACACAATTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCAgtt > 2:1783127/3‑140 (MQ=255) aGCAATAGTATTTCTTTGCCCTTATAAATTGTTTCTCCTTGACATGTGGTTATGACCCTCTTCACATGTCGGGCAAATAATTCGCGATGATAATTAAGAACTCAGGCC‑A‑AAAATAA‑CAGGCGCAATGGCCGGTTTCCgtg > 1:3862586/1‑139 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCACTGGCCGGTTTCCgtg > 1:2165297/1‑139 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCg > 1:8392839/1‑131 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:3993890/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:8729315/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:8029003/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:9029597/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:6970180/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:2247043/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:478910/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:4609230/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:7476117/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:3300085/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:3478800/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:2887933/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:571458/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:721789/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:79368/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:8389439/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 1:1192808/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTGTCCgtt > 1:8793185/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CAGGCGCAATGGCCGGTTTCCgtt > 1:3082269/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATGTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCgtt > 2:3108076/1‑140 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTAc > 1:5372910/1‑140 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTAc > 1:7659040/1‑140 (MQ=255) tAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGGTGTTaa > 2:9469208/1‑139 (MQ=255) gTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTc > 1:2727239/1‑140 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAg > 1:2017572/1‑140 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑ACGGCGCAATGGCCGGTGTCCGTTGTTACTCAAg > 2:6929193/1‑140 (MQ=255) cTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCtt > 2:9164706/1‑140 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGa > 1:7841869/1‑140 (MQ=255) aCCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGa > 2:8903993/1‑140 (MQ=255) cTTGTAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACg > 1:4384037/1‑140 (MQ=255) cTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACg > 1:6406758/1‑140 (MQ=255) tataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATCATTAAGAAATCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGaa > 2:1254478/1‑140 (MQ=255) tataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGaa > 2:592972/1‑140 (MQ=255) tataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGaa < 2:4482067/140‑1 (MQ=255) ataAATTGTTTCTCCTTGACCTGTTGTTATTACCCTCTTAACATTTCGGGCAAATCATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCAGTTTTTACTCAAGCTTTCAGACTAAt > 1:513162/1‑140 (MQ=255) ataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAt > 1:4244241/1‑140 (MQ=255) ttGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGAtt < 2:6615928/140‑1 (MQ=255) tttCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACt > 2:4782563/1‑140 (MQ=255) tttCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑ACAAAA‑AA‑CCGGCGCAATGGCCGGTTGCCGTTGGTACTCTAGCTTTCAGACGAAGTGATTACt > 1:5683080/1‑140 (MQ=255) tctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTc > 2:3709191/1‑140 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 2:7014505/140‑1 (MQ=255) ctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCg < 1:1020877/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 1:726794/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa > 1:4970554/1‑140 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 1:5965519/140‑1 (MQ=255) tGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGcc > 2:4966758/1‑140 (MQ=255) cccTGGGGTTATGACCCTCTTCACATCTCGGGCAAATAAGTCGCGAAGCTAATGAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCtg < 2:7803488/139‑1 (MQ=255) gtgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGa > 1:1548066/1‑140 (MQ=255) gtgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGa > 2:2060419/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCATTGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 2:8561504/1‑140 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGAGAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTGTCCGTGGTTACTCAAGCTGTCAGACGTAGTGATGACTGCGCAGCGTGTTGAt > 2:61656/1‑140 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 1:9287797/140‑1 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 2:9029597/140‑1 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 1:1479734/140‑1 (MQ=255) tGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtgt > 2:1172795/1‑140 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:2753064/140‑1 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:1357193/140‑1 (MQ=255) gACCCTATTCACATTTCGGGCAAATAATTCGCGAAGATCATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGAAATGGCCGGTTTCCTTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGAGTc > 2:8202674/1‑140 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCACTGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTa > 2:5152242/1‑140 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGTCGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGtt > 1:5263636/1‑139 (MQ=255) ccTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCGGTGGATCAGTGTCGTa > 2:5546871/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt > 2:4617965/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt > 2:7706007/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTACAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 2:7550048/1‑140 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:3445606/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:3792220/140‑1 (MQ=255) tttCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAg < 2:1988386/140‑1 (MQ=255) ttCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAgg > 1:2251375/1‑140 (MQ=255) cGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTc > 2:8440076/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 2:1545975/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTAGCACCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 2:8735979/1‑140 (MQ=255) ggCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTg < 1:8903993/140‑1 (MQ=255) ggCAAATAATTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAAGGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTg < 2:3863626/140‑1 (MQ=255) aataatTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:9087381/128‑1 (MQ=255) aatTCGCGAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCg < 1:6671541/140‑1 (MQ=255) cgcgAAGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGt > 1:1712816/1‑140 (MQ=255) aaGATAATTAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTtgat < 2:6320223/140‑1 (MQ=255) tAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCCATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 2:8679646/140‑1 (MQ=255) tAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 1:9494346/140‑1 (MQ=255) tAAGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 2:2403026/140‑1 (MQ=255) aGAACTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCg < 1:1901638/140‑1 (MQ=255) cTCAGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTat > 1:2429035/1‑140 (MQ=255) aGGCCAA‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACt > 2:7277556/1‑68 (MQ=255) | GCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGGCC‑A‑AAAA‑AA‑CCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826541‑1826810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |