| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,204,490 | (A)7→8 | pseudogene (175/3632 nt) | CXP41_RS11705 → | DUF4132 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,204,483 | 1 | . | A | 93.7% | 1775.2 / 95.0 | 497 | pseudogene (168/3632 nt) | CXP41_RS11705 | DUF4132 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (18/13); new base A (239/221); total (261/236) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.80e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 526 total aligned reads displayed.
ATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑A‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCG > NZ_CP025268/2204344‑2204617 | aTAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGagaa‑g < 1:6394170/140‑1 (MQ=255) aaCGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGGCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGCgaa‑g‑a‑a > 2:3812360/1‑140 (MQ=255) gCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑a‑a‑aa‑a < 1:8641227/140‑1 (MQ=255) cccAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑a‑a‑aa‑aa > 2:922698/1‑140 (MQ=255) cccAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCGACAAAAAGCTGAGAA‑G‑a‑a‑aa‑aa > 1:8906128/1‑140 (MQ=255) cccAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACAGTGGGTGATGAATTGCTACAATAAGCTGAGAA‑G‑a‑a‑aa‑aa > 1:7062174/1‑140 (MQ=255) aaCTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑a‑a‑aa‑aaaac < 2:3514837/140‑3 (MQ=255) aCTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCt < 1:7155607/140‑1 (MQ=255) gAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGc < 1:5417946/140‑1 (MQ=255) ataAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTAt < 2:2642788/140‑1 (MQ=255) taAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATg > 1:9230681/1‑140 (MQ=255) taAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATg > 2:77891/1‑140 (MQ=255) taAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATg > 2:7261783/1‑140 (MQ=255) aaaaGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATgaga > 1:1331600/1‑140 (MQ=255) aaGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAAt > 1:4801340/1‑140 (MQ=255) aaacCGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTAGCACTGGAAGTCACATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTc < 2:3858964/140‑1 (MQ=255) aaaaCGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTc < 2:3074350/140‑1 (MQ=255) aaaaCGCCGCTCAGTCAGCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTc < 1:2485191/140‑1 (MQ=255) aaCGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTTTGAGAATTTTTCAc < 1:1604437/140‑1 (MQ=255) aaCGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCAc < 2:4645911/140‑1 (MQ=255) aaCGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCAc < 2:8206933/140‑1 (MQ=255) cgcTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAg < 1:3647943/140‑1 (MQ=255) aGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCa < 2:7923089/140‑1 (MQ=255) cATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTc < 1:1041170/140‑1 (MQ=255) cATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTc < 1:7687703/140‑1 (MQ=255) cgtcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACCTTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑A‑A‑AATAATCATTGTCTGGCGGTATGAGAATTTTTCACTGGAGTGGCAGTCCGc > 2:8797/1‑140 (MQ=255) gtcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGcc > 1:578454/1‑140 (MQ=255) gtcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGcc > 2:4933352/1‑140 (MQ=255) gtcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGcc < 1:4547583/140‑1 (MQ=255) tcgCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCa > 1:6634356/1‑140 (MQ=255) tGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCAc > 1:2840605/1‑140 (MQ=255) gCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGc < 1:2627458/140‑1 (MQ=255) gCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGc > 2:1969106/1‑140 (MQ=255) gCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGc > 1:7752654/1‑140 (MQ=255) gCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGc < 2:2884816/140‑1 (MQ=255) gCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGc > 2:7088236/1‑140 (MQ=255) ccGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCa < 2:4482378/140‑1 (MQ=255) ccGGGCGAACCAGTGTCCGTTAACACTGGAAGTCTCATCCAGACATTGGGTGATGAAGTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCa < 2:9397135/140‑1 (MQ=255) ggCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGc > 2:2451622/1‑140 (MQ=255) ggCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACAGTGTCTGGCGGTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGc > 2:2088409/1‑140 (MQ=255) gCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGcc > 1:8507701/1‑140 (MQ=255) ccAGTGTCCTTAATCACTGGAATTCTCATCCAGACATTGGGTGATGAATTGCTACAACAAGCTTACAA‑G‑A‑A‑AATAAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCaa < 2:1511089/140‑1 (MQ=255) gtacGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGa < 2:6250940/137‑1 (MQ=255) tCCGTTATCACTGGAAGTCTCATCCAGACAGTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGAt > 1:6070907/1‑140 (MQ=255) tttATCACTGGAAGTCTAATCCAGACATTGGGTGATGTATTGCTACAAAAAGCTGAGAA‑G‑A‑A‑AATCAAAATGTTGTGGCGTTAGGATAATTTTTCAGTGGAGTGTCAGTCCGACATCACTCAGTCCATCATCTTGATCgg > 2:645829/2‑140 (MQ=255) gTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCgg > 1:9334304/1‑140 (MQ=255) ttATCACTGGAAGTCTCATCCCGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GTA‑A‑AA‑AAACATTGTCTGGCGTTCTGAGACTTTTTCACTGGAGTGGAAGTACGCCATAACGCAGGCCATCAACTTGTTCGGc > 2:9486301/1‑140 (MQ=255) ttATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGc < 1:8319439/140‑1 (MQ=255) ttATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGc < 1:1796100/140‑1 (MQ=255) ttATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGc < 1:2966136/140‑1 (MQ=255) tATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCg > 1:1872103/1‑140 (MQ=255) tATCACTGGAAGTCTAATCCAGACATTGGGTGATGAATTGCTAAAAAAAGCTGAGAATA‑A‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCATCTTGATCGGCg < 2:3956483/140‑1 (MQ=255) cACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAac > 2:5889444/1‑140 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAacac < 1:469776/140‑1 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAacac > 1:6752889/1‑140 (MQ=255) cTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑A‑AGAT‑AAACATTGTCTGGAGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGTTCGGCGAgcac > 2:1154714/1‑140 (MQ=255) tGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAAcaca < 1:8775813/140‑1 (MQ=255) ggAAGTCTCATCCAGACCTTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACaa > 1:31736/1‑140 (MQ=255) tctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGACTTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAATCCCt > 2:7392669/1‑140 (MQ=255) tctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGACTTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCt > 2:6979700/1‑140 (MQ=255) tctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCt > 1:2132625/1‑140 (MQ=255) tctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCt < 2:7763032/140‑1 (MQ=255) ctcATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTc > 2:520900/1‑140 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAAt > 1:6230605/1‑140 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAAt > 2:6652165/1‑140 (MQ=255) aTCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAAt > 1:9524264/1‑140 (MQ=255) tCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATc < 1:5967909/140‑1 (MQ=255) ccAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcc > 2:6080529/1‑140 (MQ=255) aCATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACAATTTCAGGCGTTATGAGAATTTTTCACTGGAGTGGAAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggc > 1:7817156/1‑140 (MQ=255) tGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcccgg > 2:3250599/1‑140 (MQ=255) tGGGTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATcccggcccgg > 1:6877630/1‑140 (MQ=255) ggTGATGAATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGAc > 2:8047934/1‑140 (MQ=255) gTGATGAATTGCTACAAACAGCTGAGAA‑GAA‑A‑AA‑AAACCTTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACa < 1:1976339/140‑1 (MQ=255) atgaCTTGCTACAAAAAGCTGAGAA‑G‑A‑ACAA‑AAAAATTGTCTGGCGTTATGAGAAATTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCTTCAACTTGATGGGCGACCACAAACCCTCTCTCCCGGCCCGGTCAATg > 2:8411989/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGCTCGGCGACCACAAACCCTCAATCCCGGCCCGGACAATg > 2:9001166/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:1127955/1‑140 (MQ=255) atgaATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATg > 1:4252699/1‑140 (MQ=255) tgaATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 2:42756/140‑1 (MQ=255) tgaATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg < 2:2338636/140‑1 (MQ=255) tgaATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATgg > 1:5500672/1‑140 (MQ=255) agaATTTCTAAAAATATCTGATAACA‑A‑A‑AA‑AAACATTGTCACTATTAATGATAATTTTTCACATGAGTGGCAGTCCGCCATCACGCAGTCCATCAACTTCATCGGCGAACAAAAACCCTCAATCCAGGCCCTGACAATgg < 2:5722740/139‑1 (MQ=255) gaATTGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATggc > 1:3812513/1‑140 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACACACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:3359867/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg > 2:3012030/1‑140 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:823861/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:8059497/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:1215851/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:5222662/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:520900/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:5421714/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACAGTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:2302719/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACAGTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:1831034/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑G‑ACA‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGgcggcg < 2:4813301/140‑1 (MQ=255) tGCTACAAAAAGCTGAGAA‑G‑A‑ACAA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCATCTTGATCGGCGAACACACACCCTCAATCCCGGCCCGGACAATGgcggcg < 1:4856985/140‑1 (MQ=255) tGCTACAAAAAGAGGATAA‑GAA‑A‑AA‑AAACATGGTCGGGCGTTCTGAGAATTTTTCACTTGAGTGGCAGTCCGCCATCACGCAGGCGATCAAATTGCTCGGCGAACACAACCCCTCACTCCCGGCCCGGACACTGgcggcg < 2:2715111/140‑1 (MQ=255) cTACAAAAAGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCt > 1:7869973/1‑140 (MQ=255) aaGCTGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGt > 1:1203013/1‑140 (MQ=255) tGAGAA‑GAA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGAAGTCCGCCATCACGCAGTCAATCAACATGATCGGCGAACAAAAACCCTCAATCCAGGCCCGGACAATGGCGGCGCTAGCCTGTATcg > 2:8628333/1‑140 (MQ=255) agaa‑gaA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATcgcg > 1:7572271/1‑140 (MQ=255) agaa‑gaA‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATcgcg > 1:4063674/1‑140 (MQ=255) | ATAACGCCCAACTGGAACTGAAATATAAAAAAGGCAAAACGCCGCTCAGTCATCGTCGCTGGCCGGGCGAACCAGTGTCCGTTATCACTGGAAGTCTCATCCAGACATTGGGTGATGAATTGCTACAAAAAGCTGAGAA‑G‑A‑A‑AA‑AAACATTGTCTGGCGTTATGAGAATTTTTCACTGGAGTGGCAGTCCGCCATCACGCAGGCCATCAACTTGATCGGCGAACACAAACCCTCAATCCCGGCCCGGACAATGGCGGCGCTAGCCTGTATCGCG > NZ_CP025268/2204344‑2204617 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |