| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,769,852 | +C | intergenic (‑52/‑89) | yfjM ← / → rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,769,848 | 1 | . | C | 96.5% | 1604.1 / 45.5 | 485 | intergenic (‑48/‑93) | yfjM/rnlA | DUF1524 domain‑containing protein/type II toxin‑antitoxin system toxin mRNA endoribonuclease RnlA |
| Reads supporting (aligned to +/- strand): ref base . (4/13); new base C (182/282); total (186/299) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 508 total aligned reads displayed.
TCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑G‑CC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCA > NZ_CP025268/2769710‑2769982 | tCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCTTCCCCCATGGTGTGGCCTGCCCGCCCGGTCGACGATCCTGCCGTGTTGTTGGAGT‑G‑c > 1:7401472/1‑140 (MQ=255) ctcgTCTGCTGGCGAATACTTAATAAGTATCTAGTTGCTGCATGGAGAGATCAGGAAGAGTTTACCGACACGATGGACATCATCCCCCATTTTGTCGACGGCCCCCCCGGTAGACGATCCTGCCCGATAGTTGGAGT‑G‑cc < 2:4967656/137‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑G‑cc‑cc < 1:1511304/140‑1 (MQ=255) tGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑G‑cc‑cc < 1:1794164/140‑1 (MQ=255) aataatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGCCGATCCTGCCCGAGAGGTGGTGTGG‑GC‑CGGATTCAGGTgg > 1:3764539/1‑140 (MQ=255) taatTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAATCGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCt < 2:8645648/140‑1 (MQ=255) aaGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAg < 1:2508784/140‑1 (MQ=255) ggaTCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCACCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCa < 2:6614704/138‑1 (MQ=255) gTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCGATCGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATGTAGCa > 1:9442168/1‑140 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCaa > 2:7113684/1‑140 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCaa < 1:1362568/140‑1 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGGTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCaa > 2:7997443/1‑140 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTAGAGTTGGAGT‑GCCC‑CCTCTTCTGGTGGCTAGATTTAGCaa > 1:9205864/1‑140 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGGAGACGATCCTGCCCTAGCGTTGGAGT‑GCCC‑CCTAGTCAGGTGGCTCAAGTTAGCaa > 2:8446607/1‑140 (MQ=255) tATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATGTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCaa > 2:9009871/1‑140 (MQ=255) tCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAAt < 1:8175510/140‑1 (MQ=255) aGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTAGAGTTGGAGT‑GCCC‑CCGATTCAGGTGGCTAAATTTAGCAAATCaa > 2:4682222/1‑140 (MQ=255) aGTTGCTGCGTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCAATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCaa < 2:2614078/140‑1 (MQ=255) ttggttctTGGTTATTTCATGAAGATGTTACCGAAACCATGGTCATCATACCCCAATTTGTGGTAGGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 2:3664063/134‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAATTCAATa < 1:166865/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:1167040/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:5498314/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:5249830/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:3250853/140‑1 (MQ=255) ttGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATa < 1:1200840/140‑1 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATaca < 1:636840/140‑1 (MQ=255) gctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATATTGTGTACTGCCCCCCCTGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTAAGCAAATCAATaca < 2:3163951/140‑1 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTCTAGTTGGAGT‑GCCC‑CCGATTCAGGTGGCTAAATGTAGCAAATCAATacac > 2:72909/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTCTAGTTGGAGT‑GCCC‑CCGAGTCAGGTGGCTAAAGTTAGCAAATCATTacac > 1:2949263/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAg < 1:3204417/127‑1 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTAGGCAGGTGGCTAAATTTAGCAAATCAATacac > 1:3956315/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCGATTGTTGGAGT‑GCCC‑CCTCTTCAGGTGGCTAAATTTAGCAAATCAATacac > 1:4525224/1‑140 (MQ=255) ctgctTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCGAGAGTTGGAGT‑GCCC‑CCGAGTCAGGTGGCTCAATTTAGCAAATCAATacac > 2:8325260/1‑140 (MQ=255) tGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAg > 2:5375498/1‑140 (MQ=255) agctCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGAGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:8314095/137‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCTGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCTATACACTTCAgggggg < 2:103893/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:5348392/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 2:1250225/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 1:2383225/140‑1 (MQ=255) agaTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAgggggg < 2:1278758/140‑1 (MQ=255) ctCAGGAAGCTGGTAAAGAAACTATGGACAACATCCCCCATTTTGTGGACAGCCCCCCCGTGAGACGATCCTGCCCTATAGTTGCAGT‑GCCC‑CCTATTCAGGTGGCTAAATGAAGCAAATCAATACACTTCAGGGGGGta < 2:5795124/139‑1 (MQ=255) ctCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:6513096/139‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:3281001/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:7655653/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 2:5300353/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:1000085/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:4379718/140‑1 (MQ=255) aTCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATGTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGta < 1:8982107/140‑1 (MQ=255) aaGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTattattt < 2:140205/140‑2 (MQ=255) ggTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTaga < 1:1959432/140‑1 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGTCGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGGATTATTGTagag > 1:6253370/1‑140 (MQ=255) gTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTagag > 2:8811392/1‑140 (MQ=255) aCCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGttt < 2:4071486/140‑1 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTcc < 1:6926374/140‑1 (MQ=255) cGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTcc > 2:8191212/1‑140 (MQ=255) cGAAACGATGGACAGCATCCCCCCTTTTGGGGACTGCCCCCCCGTTAGACGATCCGGCCCTCTAGTTGGAGT‑GCCC‑CCTCTTCAGGTGGCTAAATTTAGCCAACCAATACACTTCAGGGGGGTATTATTGTAGAGTTTcc < 2:3514885/140‑1 (MQ=255) aaCGATGGACATCATCCCCCTTTTTGTGGACTGCCCCCCCTTTAGACGATACTGCCCGTTAGTTTGAGT‑GACC‑CCTATTCAGTTGGCTAAATTTAGCAAATGAATACACTTCAGGGGGGTATTATTGTAGAGTTTcccaa < 2:5700537/140‑3 (MQ=255) aCGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCATGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCat < 2:9176480/140‑1 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCata < 1:890258/140‑1 (MQ=255) cGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCGATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCata > 2:5486582/1‑140 (MQ=255) gATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCatat < 1:7988356/140‑1 (MQ=255) tGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGt < 2:1776989/140‑1 (MQ=255) tGGACATCATCCCCCATTGTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGt < 2:5128753/140‑1 (MQ=255) catcCCCCATTTTGTGGACTGCCCCCCCGGTAGACTATCCTGCCCTATAGTTGGAGT‑GCCC‑CCGATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATg < 2:6834743/140‑1 (MQ=255) atcCCCCATTGTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTGTCTATgg > 2:244336/1‑140 (MQ=255) cccccATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTCTAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTCAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGa > 2:4394035/1‑140 (MQ=255) cccctgttGTGGACTGCCCCCCCGGTAGACGATCCTGCCCGATAGCTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTAAGCAAATCAATACTCTTCAGGGGGGTAATATTGTAGAGGTTCCCCACATGTGTCTATGGGATc < 2:8885513/134‑1 (MQ=255) tttGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACGTCAGGGGGGTATTAGTTTAGGGTTTCCCCATATGTTTCTATGGGATCCAGGa > 1:3164928/1‑140 (MQ=255) tgtgGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTACAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGaaa < 2:4004815/140‑1 (MQ=255) tgGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGAGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATg < 2:7660593/140‑1 (MQ=255) gggACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATg < 1:7476780/139‑1 (MQ=255) tGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAAt > 1:4197363/1‑140 (MQ=255) gCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATc < 1:7619227/140‑1 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGACATGACAATCa > 1:7051626/1‑140 (MQ=255) cccccccGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCa > 1:5854633/1‑140 (MQ=255) ccccGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGa > 1:779683/1‑140 (MQ=255) ccccGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGa > 1:2034772/1‑140 (MQ=255) ccccGGTAGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGa > 2:1599571/1‑140 (MQ=255) agaagaTACTGCCCTATAGTTGGAGT‑G‑CCACCTATTCAGGTGGCTTAATTTAGCAAATAAATTCACTTCTGGGGGGTATTATTGTAGAGTTTCACCATATGTTTCTATGGGATCCAGGATATGACAATCAGGAGTTACaa < 2:2780676/140‑1 (MQ=255) aGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTCTTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTGTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaa > 1:1922913/1‑140 (MQ=255) aGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaa < 1:6766399/140‑1 (MQ=255) aGACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaa < 2:3261146/140‑1 (MQ=255) gACGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACaaa > 2:1149488/1‑140 (MQ=255) cGATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTGAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGTGATCCAGGAAATGACAATCAGGAGTTACaaaaa < 1:666444/140‑1 (MQ=255) gATCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAAc < 2:4826316/140‑1 (MQ=255) aTCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt < 1:9409371/140‑1 (MQ=255) aTCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt > 1:3536320/1‑140 (MQ=255) aTCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCGAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt < 2:1670133/140‑1 (MQ=255) aTCCTGCCCTATAGTTGGAGT‑GCCC‑CCTATTCAGGGGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACt < 1:2127391/140‑1 (MQ=255) cccTATAGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATc > 1:726745/1‑140 (MQ=255) taGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTAt < 2:9318124/92‑1 (MQ=255) taGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 2:6212140/1‑140 (MQ=255) taGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc < 1:5002972/140‑1 (MQ=255) taGTTGGAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTc > 1:2845823/1‑140 (MQ=255) ggAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGTTCAGGGc > 2:7857076/1‑140 (MQ=255) ggAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCGGGGc > 1:6143085/1‑140 (MQ=255) ggAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGc > 2:3882258/1‑140 (MQ=255) ggAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGc > 1:8657476/1‑140 (MQ=255) ggAGT‑GCCC‑CCGATTCAGGTGGCTCAATTTAGCAAATCAATACACGTCAGGGGGGGATTATTGGAGAGTTTCCCCATATGTTTCTCAGGGATCCAGGACAGGACAAGCAGGAGGTACAAACACTTAAATCTGGTCAGGGc > 2:6690217/1‑140 (MQ=255) gAGT‑GCCC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCa < 2:6463166/140‑1 (MQ=255) | TCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCCCCCGGTAGACGATCCTGCCCTATAGTTGGAGT‑G‑CC‑CCTATTCAGGTGGCTAAATTTAGCAAATCAATACACTTCAGGGGGGTATTATTGTAGAGTTTCCCCATATGTTTCTATGGGATCCAGGAAATGACAATCAGGAGTTACAAAAACTTAAATCTGGTCAGGGCA > NZ_CP025268/2769710‑2769982 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |