| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,858,752 | +T | pseudogene (395/2078 nt) | flhA → | formate hydrogenlyase transcriptional activator FlhA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,858,748 | 1 | . | T | 98.0% | 1625.2 / 19.5 | 442 | pseudogene (391/2078 nt) | flhA | formate hydrogenlyase transcriptional activator FlhA |
| Reads supporting (aligned to +/- strand): ref base . (5/4); new base T (223/210); total (228/214) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
Only 100 of 506 total aligned reads displayed.
ACGCAGCATTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑TT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGTCG > NZ_CP025268/2858609‑2858882 | agcaTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCTAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑tt‑tt > 2:4147000/1‑140 (MQ=255) agcaTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCCTA‑tt‑tt > 1:2872009/1‑140 (MQ=255) agcaTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑tt‑tt > 2:2539801/1‑140 (MQ=255) agcaGTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑tt‑tt > 1:3428880/1‑140 (MQ=255) aTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑tt‑tttgg < 2:7826402/140‑4 (MQ=255) aTTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑tt‑tttgg < 2:5954212/140‑4 (MQ=255) ttttGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑tt‑tttggt < 1:3045372/140‑5 (MQ=255) tGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGc > 2:3454011/1‑140 (MQ=255) tCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCtg < 1:4199582/140‑1 (MQ=255) tCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCGGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACGGGCGGCGGAAGGGCATATTT‑TTGGTGGCtg < 1:4746143/140‑1 (MQ=255) cgcCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGa > 2:5838824/1‑140 (MQ=255) cgcCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACACAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGa > 1:4282037/1‑140 (MQ=255) ccTGATACGCTGCATTGCAGTTACGATGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTTGTGGCTGTGAAtt < 1:5544477/140‑1 (MQ=255) gATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTAt < 2:4347732/140‑1 (MQ=255) gATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTAt < 2:7461551/140‑1 (MQ=255) gATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTAt < 1:8252281/140‑1 (MQ=255) gATACGCTGCATTGCAGTTACGAAGAAGTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTAt < 2:5751976/140‑1 (MQ=255) cTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCCCTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTa > 2:8647021/1‑140 (MQ=255) tGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTTGTCGCTGGTCGGCGATAGGCAAAATTTGGTCAATATTGCCTTATGCCACAGGCGGCTGATGTGCCTATTT‑TTGGTTGGTGTGAGTCTAGTCGTGAt > 1:687899/1‑140 (MQ=255) tGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTAt > 2:85452/1‑140 (MQ=255) tGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTAt > 1:4465968/1‑140 (MQ=255) tGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTAt > 1:8745606/1‑140 (MQ=255) cATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGa < 2:5178464/140‑1 (MQ=255) cATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGa > 2:53981/1‑140 (MQ=255) cATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGa > 2:3992319/1‑140 (MQ=255) cATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGa > 1:1275746/1‑140 (MQ=255) gCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGAt < 1:5982601/140‑1 (MQ=255) gCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGAt < 2:9442117/140‑1 (MQ=255) gCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGAt < 1:2287464/140‑1 (MQ=255) gCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGAt < 1:2699392/140‑1 (MQ=255) cAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATc > 2:1451456/1‑140 (MQ=255) cAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATc > 1:1882865/1‑140 (MQ=255) ttACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGcc > 1:4123315/1‑140 (MQ=255) aCGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGcccc < 1:3152281/140‑1 (MQ=255) aCGAAGAATATTGTGAAACCTGGCCGCAGCAGGACGCAGGTGGGCTACACCCAAAATTTGGGCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGcccc < 1:6651249/140‑1 (MQ=255) gaagaaTTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTg < 2:7549172/140‑1 (MQ=255) gtgAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGaaaaa < 2:6445950/140‑1 (MQ=255) gtgAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGaaaaa < 1:7366871/140‑1 (MQ=255) gtgAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGaaaaa < 2:4730218/140‑1 (MQ=255) gAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAACATCTGGTCACAATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGGGGCGGTGAATTGATTCGTTAGGACGATCGCCCCTGGAGCGAAAAaga < 2:3741198/140‑1 (MQ=255) aaCCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCCAAATTTGGTCACTATTGCCTGATGCCCCTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGACTTTATTCGTGATGACGATCGCCCCTGGAGCGAAAAAGAGt > 1:1440929/1‑140 (MQ=255) aaCCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGt > 2:3096753/1‑140 (MQ=255) gCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATc < 2:1755718/140‑1 (MQ=255) ccGCAGCTGGACGCTGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTTGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTGCAATCg > 2:1856534/1‑140 (MQ=255) cTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCa < 1:3533785/140‑1 (MQ=255) cTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCa < 2:2452879/140‑1 (MQ=255) cTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCa < 2:264947/140‑1 (MQ=255) cTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCa < 2:7156327/140‑1 (MQ=255) cTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCa < 1:7483403/140‑1 (MQ=255) cGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACAt < 2:8071036/140‑1 (MQ=255) cGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACAt > 2:3597029/1‑140 (MQ=255) aGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTa > 1:8910062/1‑140 (MQ=255) aGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACAATTa > 2:2060264/1‑140 (MQ=255) gTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACg > 1:1965025/1‑140 (MQ=255) gTGGGCTATACCCAAAATTTGGGCACTCTTGCCTGATGCCACTGGCGGCGGAAGGGCAGATTT‑TTGGTGGCTGTGAATTTATTCGGTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACg > 1:8052805/1‑140 (MQ=255) cTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGAt < 2:164162/140‑1 (MQ=255) ataCCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCg < 2:8168964/140‑1 (MQ=255) aCCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGtt < 2:8374874/140‑1 (MQ=255) cccAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGCGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGttt > 1:6429678/1‑140 (MQ=255) cccAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAATGAGTTCAATCGTCTGCAAACATTTACGCAGATCGttt > 1:25865/1‑140 (MQ=255) cccAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGttt > 1:2140705/1‑140 (MQ=255) cccAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGttt > 2:7081117/1‑140 (MQ=255) ccAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTc > 2:9054022/1‑140 (MQ=255) aaaaTTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTg > 2:5244656/1‑140 (MQ=255) aaTTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTgtc > 2:4847597/1‑140 (MQ=255) ggTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCAc < 1:1054803/140‑1 (MQ=255) ggTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTAAGCAGATCGTTTCTGTCGTCAc > 2:3244503/1‑140 (MQ=255) ggTCACTAGTGCCTGACGCCACTGGCGGCCGACGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGAGCGCCCCTGGAGCGAAAAAGAGTTCACTCGTCGGCAAACAATTACGCAGATCGTTTCTGGCGTCAc < 2:9177441/140‑1 (MQ=255) cTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAAc < 1:5192787/140‑1 (MQ=255) cTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAAc < 2:2577650/140‑1 (MQ=255) cTATTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAAc < 1:9127694/140‑1 (MQ=255) aTTGCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACaa > 2:1314654/1‑140 (MQ=255) gCCTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATc < 1:7802036/140‑1 (MQ=255) cTGATGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCa < 2:2803369/140‑1 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 1:6181339/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 1:8334874/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 1:4581954/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 2:2278206/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 2:6718774/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCACCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 1:499454/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGATATGACGATCGCCCCTGGAGAGAAATAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 2:2228189/1‑140 (MQ=255) tGCCACTGGCGGCGGAAGGGCAAATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTATGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGc > 1:6982280/1‑140 (MQ=255) gCCACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGcc < 1:4362559/140‑1 (MQ=255) ccACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCcg < 1:9471105/140‑1 (MQ=255) ccACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCcg > 2:5613163/1‑140 (MQ=255) cACTGTCGGCGGAAGGGCATA‑TTATTGCTGGCAGTGAATTTATTCGTTATGACGATCGCCCCAGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTCCGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCcgc < 2:5081310/140‑1 (MQ=255) cACTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCcgc < 1:8580024/140‑1 (MQ=255) aCTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCTAACAACTCCAGAGCcgcg > 2:8814358/1‑140 (MQ=255) aCTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAAc > 2:8270276/1‑125 (MQ=255) aCTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAGTCCAGAGCcgag > 2:6071142/1‑138 (MQ=255) cTGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGcgt > 1:5382714/1‑140 (MQ=255) tGGCGGCGGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGcgtc < 1:1586164/140‑1 (MQ=255) gcggcgGAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGcgtcgt > 1:7691443/1‑140 (MQ=255) cggcggAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGtt > 1:3859127/1‑140 (MQ=255) ggcggAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAAc < 1:5819427/119‑1 (MQ=255) ggcggAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTa > 2:1021808/1‑140 (MQ=255) ggcggAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTa < 1:3252329/140‑1 (MQ=255) ggcggAAGGGCATATTT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTa > 2:3820367/1‑140 (MQ=255) ggAAGGGCATATTT‑TTGGTGGCTGTGACTTTATTCGTTATGACGATCGCCCATGGATCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACa < 2:2814823/140‑1 (MQ=255) ggAAGGGCATATTT‑TTGGTGGCTGTGAATTTATACGTTCTGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAACTCCAGAGCCGCGTCGTTAACa < 1:4792696/140‑1 (MQ=255) | ACGCAGCATTTTGTCGCGCCCTGATACGCTGCATTGCAGTTACGAAGAATTTTGTGAAACCTGGCCGCAGCTGGACGCAGGTGGGCTATACCCAAAATTTGGTCACTATTGCCTGATGCCACTGGCGGCGGAAGGGCATA‑TT‑TTGGTGGCTGTGAATTTATTCGTTATGACGATCGCCCCTGGAGCGAAAAAGAGTTCAATCGTCTGCAAACATTTACGCAGATCGTTTCTGTCGTCACCGAACAAATCCAGAGCCGCGTCGTTAACAATGTCG > NZ_CP025268/2858609‑2858882 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |