BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	320,615	(G)_6→7	intergenic (+482/‑44)	rclR → / → ykgE	reactive chlorine‑specific transcriptional regulator RclR/heterodisulfide reductase‑related iron‑sulfur binding cluster

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	320,609	1	.	G	96.6%	1694.1 / 46.5	500	intergenic (+476/‑50)	rclR/ykgE	reactive chlorine‑specific transcriptional regulator RclR/heterodisulfide reductase‑related iron‑sulfur binding cluster
Reads supporting (aligned to +/- strand): ref base . (10/7); new base G (197/286); total (207/293)
Fisher's exact test for biased strand distribution p-value = 2.09e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 530 total aligned reads displayed.

AGCGATGCCGAAAGAAATAAAATTAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑T‑GGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAAC  >  NZ_CP025268/320470‑320743

aGCGATGCCGAAAGAAATAAAATTAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑t                                                                                                                                         >  1:429410/1‑140 (MQ=255)

aGCGATGCCGAAAGAAATAAAATTAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑t                                                                                                                                         >  2:4374202/1‑140 (MQ=255)

  cGATGCCTACAGTAATCTAATTTGTTATTGCATTTGACGTTTTGTTGTAAGATTATCATTTGTCAGACAATTGATGGGTGGTATGTTGCTAGCATATTAAAAAAGAACGCCATATTTATTGATGTTTGATCCCCC‑GG‑T‑gg                                                                                                                                      <  1:2339202/140‑1 (MQ=255)

     tGCCGAAAGAAATAAAATTAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑T‑ggggg                                                                                                                                   >  2:2748743/1‑140 (MQ=255)

          aaagaaaTAAAATTAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTCTTGATGATTGATCCCCC‑GG‑T‑GGGGGGgaaa                                                                                                                              >  2:3122024/1‑139 (MQ=255)

              aaaTAAAATTAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATc                                                                                                                           <  2:8791070/140‑1 (MQ=255)

               aaTAAAATTAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCg                                                                                                                          >  1:8909568/1‑140 (MQ=255)

                 tAAAATTAGTTAGGGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCggg                                                                                                                        <  1:1959477/140‑1 (MQ=255)

                   aaaTTAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCa                                                                                                                      <  1:1463761/140‑1 (MQ=255)

                   aaaTTAGTTATTGCATTTGACGTTTGGATGAAAGATTAACATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCa                                                                                                                      <  1:4488448/140‑1 (MQ=255)

                       tAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATaaa                                                                                                                  <  1:7387224/140‑1 (MQ=255)

                       tAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATaaa                                                                                                                  <  1:5139108/140‑1 (MQ=255)

                       tAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATaaa                                                                                                                  <  1:2864109/140‑1 (MQ=255)

                       tAGTTATTGCATTTGACGTTAGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATaaa                                                                                                                  <  1:3256340/140‑1 (MQ=255)

                        aGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAAt                                                                                                                 <  1:2549821/140‑1 (MQ=255)

                        aGTTAGTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAAt                                                                                                                 <  2:8994167/140‑1 (MQ=255)

                         gTTATTGCATTTGGCGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATg                                                                                                                >  1:9093303/1‑140 (MQ=255)

                             ttGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAGACATCGGGCATAAATGGGCa                                                                                                            <  2:3481089/140‑1 (MQ=255)

                             ttGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCa                                                                                                            <  2:1423794/140‑1 (MQ=255)

                             ttGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCa                                                                                                            <  2:3905381/140‑1 (MQ=255)

                             ttGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCa                                                                                                            <  2:374415/140‑1 (MQ=255)

                             ttGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCa                                                                                                            <  2:1199158/140‑1 (MQ=255)

                             ttGCAATTGACGATTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCa                                                                                                            <  1:7783756/140‑1 (MQ=255)

                             ttGCAAATGACGTTTGGATGAAAGAGTATCATGTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCa                                                                                                            <  1:6385618/140‑1 (MQ=255)

                              tGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCAt                                                                                                           >  2:5246116/1‑140 (MQ=255)

                               gCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATg                                                                                                          <  1:5990616/140‑1 (MQ=255)

                               ccATTTGACGTTTGGATGAAAGATTATCCTTGGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCCTATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATg                                                                                                          <  1:7257754/139‑1 (MQ=255)

                                 aTTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGaa                                                                                                        <  2:2162998/140‑1 (MQ=255)

                                 aTTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGaa                                                                                                        <  2:6397588/140‑1 (MQ=255)

                                     gACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTaa                                                                                                    <  1:5518934/140‑1 (MQ=255)

                                     gACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTaa                                                                                                    <  1:2059786/140‑1 (MQ=255)

                                     gACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTaa                                                                                                    <  1:9478053/140‑1 (MQ=255)

                                      aCGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAAt                                                                                                   <  1:5174973/140‑1 (MQ=255)

                                      aCGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAAt                                                                                                   <  1:7537472/140‑1 (MQ=255)

                                       cGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATg                                                                                                  >  2:4519778/1‑140 (MQ=255)

                                        gTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATgg                                                                                                 <  2:3418765/140‑1 (MQ=255)

                                           tGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGt                                                                                              >  1:6519141/1‑140 (MQ=255)

                                            ggATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTa                                                                                             <  2:2055954/140‑1 (MQ=255)

                                             gATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTAGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTAt                                                                                            <  1:8106167/140‑1 (MQ=255)

                                                   aGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACTCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTtg                                                                                      <  2:411961/140‑1 (MQ=255)

                                                               gTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAAtt                                                                          >  1:7039870/1‑140 (MQ=255)

                                                               gTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAAtt                                                                          >  2:6889752/1‑140 (MQ=255)

                                                                   tACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCtt                                                                      >  2:5648936/1‑140 (MQ=255)

                                                                   tACAAATGAGGGGTGGTAGGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGCAGTAATGGAGTCTTGGTGGTGATTGTCAATTTCtt                                                                      >  1:6796237/1‑140 (MQ=255)

                                                                    aCAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCttt                                                                     <  1:6289699/140‑1 (MQ=255)

                                                                      aaaTGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGt                                                                   <  1:8319140/140‑1 (MQ=255)

                                                                         tGAGGTGTTGTATTTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GGTT‑GGGGGGAATCATCTGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCAc                                                                <  1:5797327/140‑1 (MQ=255)

                                                                         tGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCAc                                                                <  1:4001705/140‑1 (MQ=255)

                                                                         tGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCAc                                                                <  2:552104/140‑1 (MQ=255)

                                                                         tGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCAc                                                                <  2:7789544/140‑1 (MQ=255)

                                                                         tGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCAc                                                                <  1:6906144/140‑1 (MQ=255)

                                                                         tGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCAc                                                                <  2:9093303/140‑1 (MQ=255)

                                                                         tGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCAc                                                                <  1:5035690/140‑1 (MQ=255)

                                                                           tggggTGGTTTGTTGCTAGCAAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GGTT‑GGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATTGAGTATTAGTTGTGAATGTCAATTTATTTGTCACCt                                                              <  2:2553108/139‑1 (MQ=255)

                                                                           aGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCt                                                              <  2:7574664/140‑1 (MQ=255)

                                                                           aGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCt                                                              <  1:7853483/140‑1 (MQ=255)

                                                                             gggTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGt                                                            >  1:9292533/1‑140 (MQ=255)

                                                                                  gtATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGTAGTAATGGAGTAGTAGTTGTGACTGTCAATTTCTGTGTCACCTGTAGTgg                                                       >  2:6617742/1‑140 (MQ=255)

                                                                                  gtATGTGGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTgg                                                       >  2:792983/1‑140 (MQ=255)

                                                                                       ttGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACg                                                  >  1:2712301/1‑140 (MQ=255)

                                                                                         gCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCCGGG‑G‑GGGGGGAAACATCGGGCATAAATGGGCATGAAGTACTGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGcc                                                >  2:7374074/1‑140 (MQ=255)

                                                                                         gCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGcc                                                >  1:6169032/1‑140 (MQ=255)

                                                                                         gCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGcc                                                <  1:1817775/140‑1 (MQ=255)

                                                                                          cTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGTAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATAGGTGACGccc                                               >  2:163027/1‑140 (MQ=255)

                                                                                          cTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTTTCACCTGTATTGGTGACGccc                                               >  2:4846614/1‑140 (MQ=255)

                                                                                          cTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGa                                                    >  2:3321682/1‑135 (MQ=255)

                                                                                          cTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGccc                                               >  2:702700/1‑140 (MQ=255)

                                                                                          cTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGccc                                               >  2:811779/1‑140 (MQ=255)

                                                                                           tAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCt                                              <  1:5294535/140‑1 (MQ=255)

                                                                                            aGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTg                                             <  2:291147/140‑1 (MQ=255)

                                                                                            aGCCAATTAAAAAAGAACGCCATAGTTATTGATGTTTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTg                                             >  2:4575603/1‑140 (MQ=255)

                                                                                             gCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATACATGGGCATGAAGTAATGGAGTCTTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGa                                            >  2:3054370/1‑140 (MQ=255)

                                                                                             gCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGa                                            >  1:4579016/1‑140 (MQ=255)

                                                                                             gCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGa                                            >  1:4768670/1‑140 (MQ=255)

                                                                                             gCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGGATTGGTGACGCCCTGa                                            >  2:3966281/1‑140 (MQ=255)

                                                                                              ccAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGaa                                           <  2:2288637/140‑1 (MQ=255)

                                                                                                 aTTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATc                                        >  1:8213133/1‑140 (MQ=255)

                                                                                                  ttAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCa                                       >  1:1614059/1‑140 (MQ=255)

                                                                                                    aaaaaaGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAg                                     <  2:4659561/140‑1 (MQ=255)

                                                                                                      aaaaGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGaa                                   <  1:3668831/140‑1 (MQ=255)

                                                                                                        aaGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATg                                 <  2:2359019/140‑1 (MQ=255)

                                                                                                           aaCGCCATATTTATTGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCa                              <  1:296731/140‑1 (MQ=255)

                                                                                                                  tatttattGATGATTGATCCCCC‑GG‑TGGGGGGGAAAAATCGGGCATAAATGGGCATGAAGTAATGGAGTATTTGGTGTGTTTGTCAATTTCTTTGTCACCGGTATTGGTGACGCCCTGATATCTCGAATGGCTCgtgtcg                       >  2:9213384/1‑135 (MQ=255)

                                                                                                                   atttattGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTc                      <  1:8723392/140‑1 (MQ=255)

                                                                                                                     tgcttGAGGATTGATCCCCCGGG‑G‑GGGGGGAAACATCGGGCAGCAATGGGCATGAAGTAATGGAGTATGAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCg                    <  2:8389340/137‑1 (MQ=255)

                                                                                                                       attGATGATTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGtg                  <  2:6219143/140‑1 (MQ=255)

                                                                                                                          gatgatTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGtgctg               >  1:3539045/1‑140 (MQ=255)

                                                                                                                          gatgatTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGtgctg               >  1:4448143/1‑140 (MQ=255)

                                                                                                                           atgatTGATCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGtgctgc              >  2:5077570/1‑140 (MQ=255)

                                                                                                                            tgattgatCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTgctgct             >  1:7187554/1‑140 (MQ=255)

                                                                                                                            tgattgatCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTgctgct             <  2:1286309/140‑1 (MQ=255)

                                                                                                                              attgatCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTAc           <  2:6090202/140‑1 (MQ=255)

                                                                                                                              attgatCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTAc           >  1:3837055/1‑140 (MQ=255)

                                                                                                                                  atCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGTGTATTAGTGGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGa       >  2:6704960/1‑140 (MQ=255)

                                                                                                                                  atCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGa       >  1:8472999/1‑140 (MQ=255)

                                                                                                                                  atCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGa       >  1:4156933/1‑140 (MQ=255)

                                                                                                                                  atCCCCC‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGa       >  1:3403458/1‑140 (MQ=255)

                                                                                                                                     cccc‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGaaaa    >  1:1179912/1‑140 (MQ=255)

                                                                                                                                       cc‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAAc  >  2:1921381/1‑140 (MQ=255)

                                                                                                                                       cc‑GG‑TGGGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAAc  >  1:1322788/1‑140 (MQ=255)

AGCGATGCCGAAAGAAATAAAATTAGTTATTGCATTTGACGTTTGGATGAAAGATTATCATTTGTCATACAAATGAGGGGTGGTATGTTGCTAGCCAATTAAAAAAGAACGCCATATTTATTGATGATTGATCCCCC‑GG‑T‑GGGGGGAAACATCGGGCATAAATGGGCATGAAGTAATGGAGTATTAGTTGTGAATGTCAATTTCTTTGTCACCTGTATTGGTGACGCCCTGAAATCAAGAATGGCACGAGACTCCGTGCTGCTACTGGAAAAAC  >  NZ_CP025268/320470‑320743

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`