| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,016,563 | +C | intergenic (‑19/+28) | yqeB ← / ← yqeC | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB/selenium cofactor biosynthesis protein YqeC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,016,562 | 1 | . | C | 96.2% | 1746.0 / 56.8 | 532 | intergenic (‑18/+29) | yqeB/yqeC | selenium‑dependent molybdenum cofactor biosynthesis protein YqeB/selenium cofactor biosynthesis protein YqeC |
| Reads supporting (aligned to +/- strand): ref base . (14/6); new base C (200/312); total (214/318) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.94e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 565 total aligned reads displayed.
TCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑T‑CTTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCA > NZ_CP025268/3016423‑3016696 | tCGGCGCGCACTAACATTTGTGCAGACTGGCGGGGAGTCGAGCCTCGGCTTTCAACAATTTGCGCCATAGCAAACGGACAATTTTGCACTTCGAGTTTTGCAGCCTCTGTGTAATTATTCATACCAACCTCAATGGata‑t > 2:679090/1‑140 (MQ=255)tCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGata‑t > 2:635027/1‑140 (MQ=255)tCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGata‑t > 2:3632615/1‑140 (MQ=255) cGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑T‑c < 1:7960079/140‑1 (MQ=255) gcgcACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑T‑Ccttt > 2:662773/1‑139 (MQ=255) gcgcACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑T‑Ccttt < 2:4666870/140‑2 (MQ=255) cACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAGCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAg < 1:5426683/140‑1 (MQ=255) cACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAg < 1:2133277/140‑1 (MQ=255) cACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAg < 1:585247/140‑1 (MQ=255) aCATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAAcc < 2:3859862/140‑1 (MQ=255) gtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAAt > 1:7335011/1‑140 (MQ=255) gtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAAt > 1:5259057/1‑140 (MQ=255) gtgCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑T‑Ccttt < 1:2707754/126‑2 (MQ=255) cAGAATGGCGGGGAGTCGCGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTGTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATGCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGACTAcc < 2:6719075/140‑1 (MQ=255) aGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATAccc > 1:3059293/1‑140 (MQ=255) aaTGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCgg > 2:5884567/1‑140 (MQ=255) tGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGc > 1:6777998/1‑140 (MQ=255) tGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGc < 2:5495304/140‑1 (MQ=255) cGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATCTTCATACCAACCTCAATGGCTA‑TCCTTTCAGTCACCCGGAATACCCGGGCCgc > 2:5833495/1‑139 (MQ=255) gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTa < 1:7232226/140‑1 (MQ=255) gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTa > 1:1064598/1‑140 (MQ=255) gggAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTa < 1:5079188/140‑1 (MQ=255) tCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTca < 1:8338764/140‑1 (MQ=255) ccTCGGCGATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAAt < 1:2365561/140‑1 (MQ=255) cGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTg > 2:7455734/1‑140 (MQ=255) gCTCTCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg > 1:1200084/1‑140 (MQ=255) gCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcg < 1:957458/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 1:4216087/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 2:3785524/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 2:8254577/140‑1 (MQ=255) tATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTgcgcg < 1:1393987/140‑1 (MQ=255) caaTTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTg < 2:6024098/140‑1 (MQ=255) aTTTGCGCCATATCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCa < 2:1161128/140‑1 (MQ=255) ttGCGCCATAGCAAACGGACATTTTTTCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg < 2:1517616/140‑1 (MQ=255) ttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg < 1:4030627/140‑1 (MQ=255) ttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg < 1:3673243/140‑1 (MQ=255) ttGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAgg < 1:1464928/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 2:8750560/140‑1 (MQ=255) tGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTGTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTAACAAATCTGCGCGCGAGTGCAGGa < 2:1681489/140‑1 (MQ=255) tGCGCCAGAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCAGACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGa < 2:7088023/140‑1 (MQ=255) cgcCATAGCAAACGGCCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCACCCTCAATGGATA‑TCCTGTCAGTAACCCGGAATCCCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:1292641/140‑1 (MQ=255) cgcCATAGCAAACGGACCATATTGCTCTTCGAGTTTTGCAGCCTCTGTGCAAATATTCATACCTACCTCACTGGATA‑TCCTTTCAGTAACCCGGAAGACCCGGGCCGCTAATTCCCAAATCTGCGCGCGATTGCAGGATg < 2:8179522/140‑1 (MQ=255) cgcCATAGCAAACGGACATTTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACGCGGGCCGCTAATTCACAAATCTGCGAGCGATTGCAGGATg < 2:4998967/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAATATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAATTCTGCGCGCGATTGCAGGATg < 2:3268320/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:769840/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:5203696/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 2:2675178/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:6992360/140‑1 (MQ=255) cgcCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATg < 1:1938512/140‑1 (MQ=255) ccATAGCAAACGGACAACTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCGCACTGGATA‑TCCTTGCAGTAACCCGGAATACCCGGGCCGCTAATACACAAATCTGCGCGCGAGTGCAGGATGtt < 2:3943120/140‑1 (MQ=255) tAGGAAACGGACACTTTTGCTCTTCGCGGTGTGCAGCCTCGGTGAAAATAGTCAGACCACCCTCAATGGATA‑TCCTTTCAGTAACCCGGAAGACCCGGGCCGCTAATTCACAACTCTGCGCGCGATTGCAGGATGTTCtt < 1:9130922/140‑1 (MQ=255) aaaCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGtat < 2:2201664/140‑1 (MQ=255) aaCGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAATTATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGtata > 1:6192564/1‑140 (MQ=255) aCGGACAATTTTGCTCTTAGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATAGCAGGATGTTCTTGTatat > 2:7857335/1‑140 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCCATGGATAGC‑CTTTCAGTAACCCGGAAGACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc < 2:8331297/140‑1 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc > 1:3853299/1‑140 (MQ=255) aCAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAAAATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc > 1:4498152/1‑140 (MQ=255) aCAATTTTGCTCTNCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAGTCTGCGCGCNATTGCAGGATGTTCTTGTATATCGcc > 1:5540235/1‑140 (MQ=255) aCAATTTTGCTCGTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTGTCAGTAACCCGGACTACCCGGGCCGCTAAGTCACTCATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGcc > 2:2720386/1‑140 (MQ=255) tGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTGTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCccagccag < 2:4841983/140‑1 (MQ=255) gCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGa > 1:2549389/1‑140 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:8450688/140‑1 (MQ=255) ctctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAt < 1:815222/140‑1 (MQ=255) ctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTg < 1:6659455/140‑1 (MQ=255) ctTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTg < 1:179411/140‑1 (MQ=255) aGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCctct < 1:4889054/140‑1 (MQ=255) gTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTa < 2:6977203/140‑1 (MQ=255) tttGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcg < 2:8564741/140‑1 (MQ=255) tttGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAAGACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcg < 1:8985956/140‑1 (MQ=255) ttGCAGCCTCTGTGAAAAGAGTCATACCAACCTCACTGGATA‑TCCATTCAGTAACCCGGAATACCCGGGCCGCTAATTCACCAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgt < 2:2962030/140‑1 (MQ=255) ttGCAGCCTCGGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTAcgt < 1:3454679/140‑1 (MQ=255) gCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTATCCCGTAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGGAAAACGCCCAGCCAGATTGCCTCTAcgtcg > 2:8877505/1‑140 (MQ=255) cccTCTGTGAAAATATTCAGACCACCCTCAATGGATA‑TCCTTTCAGTAACCCGGAAGACCCGGGCCGCTACTTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCgtgt < 2:9427985/139‑1 (MQ=255) tgtgAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTGTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGttgttg > 2:5358384/1‑140 (MQ=255) tgtgAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGttgttg > 1:9052230/1‑140 (MQ=255) tgtgAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGttgttg < 1:6420330/140‑1 (MQ=255) tgAAAATATTCATACCAACCTCAATGGATA‑TCCTGTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCa < 2:5609356/140‑1 (MQ=255) gAAAATATTCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGAGTGCCTCTACGTCGTGTTGTTGCAg < 2:2052255/140‑1 (MQ=255) aaaaTATTCATACCAACCACAATGCATA‑TCCTTTCACTAACCCGGAATACCCGGGCCGCTAATTCACACAACACCGCGCGATTGCAGGATGTTCTTGTATAACGCCCAGCCAGATTGCCTCAACGTCGAGTTGTTGCAGc < 2:2468904/140‑1 (MQ=255) tCATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGaa < 2:3329866/140‑1 (MQ=255) cATACCAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAg > 1:604652/1‑140 (MQ=255) ccAACCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGc < 2:3529112/140‑1 (MQ=255) ccAACCTCAATGGATA‑TCCTGTCAGTAACCCGGAAGACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATCTCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCTGCGGTTGACGGAGc < 2:4084195/140‑1 (MQ=255) ccAAACTCACTGGATA‑TCCTTTAAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGc < 2:7984803/140‑1 (MQ=255) aaCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTAACAAATCTGCGCGCGAGTGCCGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTGGAAGGAGCTc > 2:1890407/1‑140 (MQ=255) aCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTg > 1:7048268/1‑69 (MQ=255) aCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg > 1:8029077/1‑140 (MQ=255) aCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg < 1:1630459/140‑1 (MQ=255) aCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg < 2:4261894/140‑1 (MQ=255) aCCTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGAAGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCg > 2:4579061/1‑140 (MQ=255) ccTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc > 1:3281842/1‑140 (MQ=255) ccTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc > 2:4404858/1‑140 (MQ=255) ccTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc > 1:6491272/1‑140 (MQ=255) ccTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGc > 1:8578331/1‑140 (MQ=255) cTCAATGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCt < 2:7353822/140‑1 (MQ=255) acttgATA‑TCCTTTCAGTAACCCGGAATACCCGGTCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtg < 2:9109771/136‑1 (MQ=255) actGGATA‑TCCTTTCAGTAACCCGGAAGACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtg < 1:9440306/138‑1 (MQ=255) aTGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtgt < 1:5704219/140‑1 (MQ=255) tGGATA‑TCCTTTCAGTAACCCGGAATACCCGGGCCGCTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTtgtg < 1:8873404/140‑1 (MQ=255) gATA‑TCCTTTCAGCAACCCCGACTACCCCGGCCGCTAACTCACACATCTGCGCGCGATTGCAGGAAGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGAGTTGTAGCAGCGGTTGAAGGAGCTCGCTTTGTGCa < 1:7561227/140‑1 (MQ=255) | TCGGCGCGCACTAACATTTGTGCAGAATGGCGGGGAGTCGAGCCTCGGCTATCAACAATTTGCGCCATAGCAAACGGACAATTTTGCTCTTCGAGTTTTGCAGCCTCTGTGAAAATATTCATACCAACCTCAATGGATA‑T‑CTTTCAGTAACCCGGAATACCCGGGCCGTTAATTCACAAATCTGCGCGCGATTGCAGGATGTTCTTGTATATCGCCCAGCCAGATTGCCTCTACGTCGTGTTGTTGCAGCGGTTGAAGGAGCTCGCTTTGTGCA > NZ_CP025268/3016423‑3016696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |