| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,239,247 | (T)6→7 | intergenic (+264/‑18) | ygjR → / → alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,239,241 | 1 | . | T | 95.3% | 1699.5 / 69.7 | 514 | intergenic (+258/‑24) | ygjR/alx | Gfo/Idh/MocA family oxidoreductase/TerC family membrane protein Alx |
| Reads supporting (aligned to +/- strand): ref base . (13/11); new base T (182/301); total (195/319) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-02 | |||||||||||
Only 100 of 583 total aligned reads displayed.
TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑T‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 | tgtgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTCTGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCg > 2:7751073/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGTCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:3228031/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:1354318/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:6758410/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:4580834/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 1:2063995/1‑140 (MQ=255) tgtgAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t > 2:869023/1‑140 (MQ=255) aaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATCCGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t‑ttttt < 2:5993920/140‑2 (MQ=255) aaaaaCACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑t‑t‑ttttt < 2:3793425/140‑2 (MQ=255) cacaTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCCGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑Atgtg > 2:9259364/1‑140 (MQ=255) cacaTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑Atgtg > 1:2523054/1‑140 (MQ=255) cacaTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTGTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑T‑T‑TTTTGAtgtg > 2:8820707/1‑140 (MQ=255) caTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGAAGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCTGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTa < 2:4654705/140‑1 (MQ=255) aTCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTaa < 1:7501849/140‑1 (MQ=255) ccGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAgg < 1:306724/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGaa < 2:8929870/140‑1 (MQ=255) ggTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGaa < 1:522071/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACt < 1:731460/140‑1 (MQ=255) tCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACt < 1:1772617/140‑1 (MQ=255) gggCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTAt < 1:3877453/140‑1 (MQ=255) gCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGa < 1:2731079/140‑1 (MQ=255) cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAACAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGaa < 1:8578563/140‑1 (MQ=255) cAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGaa < 2:8502762/140‑1 (MQ=255) gAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCa < 2:4348299/140‑1 (MQ=255) aTACGCAGACGTATTCCTTTTTTGTTGTAAGTGCTACCTTGCCGGAAGGCGAGTTCTATGCATAAAAAGCAGCGGCTGACGTCGTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCTGCACg > 2:8088265/1‑140 (MQ=255) aTACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCAGGAAGGCGAGGTCTATGCATAAAAAGCAGCTGCTGACGTGTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGACCTTCTATGAATACTGTCGGCACg < 2:5567358/140‑1 (MQ=255) aTACGCAGACGTATTCCTTTGTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCTCg > 1:6556544/1‑140 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc < 2:6723584/140‑1 (MQ=255) tACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGGTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCCCGc > 2:2887496/1‑140 (MQ=255) cGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg < 2:4169460/140‑1 (MQ=255) cGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCg < 2:3643880/140‑1 (MQ=255) gCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGt < 1:7811089/140‑1 (MQ=255) gACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGc < 2:8241415/140‑1 (MQ=255) cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGACGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCtc > 2:1886818/1‑139 (MQ=255) atttttGTTGTACGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCgg < 1:8865939/139‑1 (MQ=255) tttttGGTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCggt > 1:4916688/1‑139 (MQ=255) tttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGGTATGGGGCGGAtt < 1:9113045/140‑1 (MQ=255) gttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGc < 1:1993920/140‑1 (MQ=255) tgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCCGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGCACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg < 2:8990909/140‑1 (MQ=255) tAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgtt < 2:6941321/140‑1 (MQ=255) tAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgtt < 2:1719044/140‑1 (MQ=255) agagaCCTAGCCGGAAGGCGAGGTCTATGCATCAACAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑T‑TATATT‑ATGTGTAAGGACCTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttg < 1:2648003/139‑1 (MQ=255) gagaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgttgt < 2:7510361/140‑1 (MQ=255) cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCa < 1:9389821/140‑1 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt > 2:2159898/1‑140 (MQ=255) tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGGTGTTGTCGCCagt > 1:1735698/1‑138 (MQ=255) ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTAt > 1:9544947/1‑140 (MQ=255) ggAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGc < 1:7706815/140‑1 (MQ=255) gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCt < 1:5997493/140‑1 (MQ=255) gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCt < 2:2299008/140‑1 (MQ=255) cGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGGTGTTGTCGCCATTATGCTGGCTa > 1:398060/1‑140 (MQ=255) gAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTAt < 2:3045522/140‑1 (MQ=255) gAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTAt < 2:4923421/140‑1 (MQ=255) gTCTATGCATAAAAAGCAGCGGCTGACGTCGTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGa < 2:7685572/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 2:4064278/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 2:5151797/140‑1 (MQ=255) tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAAGACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc < 2:6232813/140‑1 (MQ=255) cTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAcc < 1:6156987/140‑1 (MQ=255) tATGCAGACAAAGCAGCGGCTGACGTCGGCCGACGTTGGCCG‑TGT‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCt < 2:6411451/140‑1 (MQ=255) aTAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtgttgt < 2:3228031/140‑1 (MQ=255) aaaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGttgttg > 2:6543909/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGACCTTCTATGAATACTGTCGGCACGCCGTTGCTAGGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGGGGTTGc > 1:6459268/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc < 1:792917/140‑1 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGGTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc > 1:424605/1‑140 (MQ=255) aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCGGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGc > 2:5280718/1‑140 (MQ=255) aaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAg > 2:8408248/1‑140 (MQ=255) aaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAg < 1:1226420/140‑1 (MQ=255) aaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAg < 2:3536779/140‑1 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg < 1:71545/140‑1 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg < 1:1909614/140‑1 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAggg < 2:1433571/140‑1 (MQ=255) gcagcGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAAAACTCTCGGCACGCCCGTGCTATGGGGCGGATTCGCTGTAGTAGTCTCCAATATGCAGGCTATCGACCTGTTGTAGCAggg > 2:2022348/1‑140 (MQ=255) cagcGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAgggg < 2:1246957/140‑1 (MQ=255) agcGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAGTCGCTGGTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGc > 1:3447780/1‑140 (MQ=255) gcGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 2:7364007/140‑1 (MQ=255) gcGGCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcg < 2:5845924/140‑1 (MQ=255) ggCTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcgtc > 1:6293909/1‑140 (MQ=255) cTGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGGCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGcgtcgt < 2:2626417/140‑1 (MQ=255) tGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGACCTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTg < 2:7913002/140‑1 (MQ=255) tGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGCTTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTg < 1:6422060/140‑1 (MQ=255) tGACGTCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTg < 1:4463475/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:2327008/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:2208194/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:3661662/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:1120597/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:568706/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:9425421/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:8056154/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:8981480/140‑1 (MQ=255) tCTTCCGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTAGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 2:7275842/140‑1 (MQ=255) tCTTCCGACGTTGGCCGAT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGca < 1:8693009/140‑1 (MQ=255) ccGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 1:845261/1‑140 (MQ=255) ccGACGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATg > 2:4801483/1‑140 (MQ=255) aCGTTGGCCG‑T‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:2788053/140‑1 (MQ=255) cGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 1:708932/140‑1 (MQ=255) cGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 2:6100173/140‑1 (MQ=255) cGTTGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccat < 1:2912082/140‑1 (MQ=255) ttGGCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatga > 1:4762374/1‑140 (MQ=255) ggCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccatgacc > 2:2374933/1‑140 (MQ=255) ggCCGTT‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGccaagacc > 1:5844999/1‑140 (MQ=255) | TGTGTGAAAAAACACATCCGGTCACCGGGCAACCCGAAAGGAATACGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCG‑T‑T‑TTTT‑ATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTGTTGTTGCAGGGGCGTCGTGGGGCACATGCCATGACC > NZ_CP025268/3239102‑3239375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |