| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,509,139 | +C | pseudogene (137/878 nt) | php ← | phosphotriesterase‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,509,136 | 1 | . | C | 98.0% | 2556.7 / 36.8 | 748 | pseudogene (140/878 nt) | php | phosphotriesterase‑related protein |
| Reads supporting (aligned to +/- strand): ref base . (8/7); new base C (369/360); total (380/368) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 822 total aligned reads displayed.
CCACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508997‑3509270 | cacaTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTacgcacg‑c < 2:8578417/140‑1 (MQ=255) cacaTGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTacgcacg‑c > 1:1779989/1‑140 (MQ=255) ccGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGtc > 1:8901876/1‑140 (MQ=255) cGGGAACAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGtca > 2:9331021/1‑140 (MQ=255) gggAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGtcat < 1:4744820/140‑1 (MQ=255) ggAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGtcatc < 1:2314781/140‑1 (MQ=255) aaaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGt > 2:1428861/1‑140 (MQ=255) gcgTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGtt < 2:6327384/140‑1 (MQ=255) cTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCAtct < 2:8280364/140‑1 (MQ=255) gTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCt > 1:3139099/1‑140 (MQ=255) aataaCCGGTACAGGCCACCTCGTTGATCCCCGTCTCGCTCATTACATCAAGCAGAACGTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCTGGTCGTTCATCGCCTgg < 2:5316570/140‑1 (MQ=255) cccGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:6083400/139‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:7075974/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:2002110/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:6547703/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTAGATACCCGTCTCGCGCAGTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCCATCACATTACGCACGCCC‑CGGGTCATCAGGTCGATCATCTCCTGGCaaa > 2:4264286/1‑140 (MQ=255) cGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATg < 2:4929793/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:2986141/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 2:290959/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc > 1:822640/1‑140 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:7845541/140‑1 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:4197832/140‑1 (MQ=255) ggCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCAGTGCGCCCCATGTAACGGTTGGTCATCTCAAGCACATTACGCACGCCC‑CGGGTCATCAGGGCGTTCATCTCCTGGCAAATGAACGCAt > 1:4360801/1‑140 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACCTCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa < 2:7794792/140‑1 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa < 2:8774737/140‑1 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa > 1:1122416/1‑140 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa > 1:3721907/1‑140 (MQ=255) accacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTg < 1:7148439/140‑1 (MQ=255) ccacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGa > 1:1605279/1‑140 (MQ=255) ccacGTTGATCCCCGTCTCACGCATTCCATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCCATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGa > 2:6566919/1‑140 (MQ=255) ccacGTTGAACCCCGTCTCGCGCATTACATCAAGCTTAATTTGCGCATTGCTCCACATTAAACGGTTGGTCAACTCAATCACATTACGCACG‑CCACGGGTCATCAGGTCGTTCATCTCCTGGCAAAAGAACGCATAATGa > 2:7155807/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 2:8934752/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 1:8666556/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 2:6526042/1‑140 (MQ=255) tGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg > 1:5478096/1‑140 (MQ=255) tGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg > 2:1320809/1‑140 (MQ=255) tGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg > 1:6699322/1‑140 (MQ=255) tGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg > 1:931268/1‑140 (MQ=255) gATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggc > 2:5714518/1‑140 (MQ=255) aTCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcg < 2:9213550/140‑1 (MQ=255) tCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcgg > 2:8109677/1‑140 (MQ=255) cccGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCa > 1:4888382/1‑140 (MQ=255) cGTCTCGCGCATTACATCAAGCATAACTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGt < 1:7454223/140‑1 (MQ=255) gTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTc > 1:7937974/1‑140 (MQ=255) gTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTc > 2:6892640/1‑140 (MQ=255) gcgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgt < 2:4108705/140‑1 (MQ=255) gcgcATTACATCAAGCATAAAGTGCGCGTTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgt < 1:4490896/140‑1 (MQ=255) cATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCTGCAGTCCACgttgt > 2:5200681/1‑140 (MQ=255) cATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgttgt > 2:2538235/1‑140 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt < 1:8516403/140‑1 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt > 2:7683998/1‑140 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCACAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt < 1:2828155/140‑1 (MQ=255) cATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTa < 1:2570109/140‑1 (MQ=255) aTCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTaa < 2:5478096/140‑1 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg < 1:1399110/140‑1 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:5062630/91‑1 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga < 1:2135335/140‑1 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga > 1:1281153/1‑140 (MQ=255) aTAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga < 1:5166693/140‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt < 2:3451848/104‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga > 2:3224737/1‑140 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga > 2:2781627/1‑140 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 1:6900283/140‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGATGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga > 2:4626627/1‑140 (MQ=255) aaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgagag > 1:3959595/1‑140 (MQ=255) tgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCaaa > 1:8372724/1‑85 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACTCATACTGATCAAGGAGGCAGTCCACGTTGTTTTTAATGCCGGAGAGATCaa > 2:369738/1‑140 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCat > 2:729922/1‑139 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa < 1:5368290/140‑1 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 2:2196673/1‑140 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 2:6764088/1‑140 (MQ=255) gcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAat > 2:1895142/1‑140 (MQ=255) cgcCCCATGTAACGGTTTGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAg < 2:7930519/140‑1 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAg > 1:8064402/1‑140 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAg < 1:2456798/140‑1 (MQ=255) ccccATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGAt < 1:3496636/140‑1 (MQ=255) cccATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATg > 1:997675/1‑140 (MQ=255) gTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCAt < 1:2065520/140‑1 (MQ=255) gTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCAt < 1:5860269/140‑1 (MQ=255) gTAACGGTTGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCAt < 1:5666762/140‑1 (MQ=255) gTAACGCGTGGTCCTCTCACACACATTACGCACGCCC‑CGGGTCATCAGGTCGGTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCAt < 1:8993576/140‑1 (MQ=255) ggTTGGTCATCTCACTCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 2:1719714/140‑1 (MQ=255) ggTGGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 2:3991757/140‑1 (MQ=255) gTTGGTCAACTCAATCACCTTACGCACGCCC‑CGGGTCATCAGGTCGGTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGGTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGa < 2:4438942/140‑1 (MQ=255) ttGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 1:3351796/1‑140 (MQ=255) ttGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 2:700451/1‑140 (MQ=255) ttGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 1:3837088/1‑140 (MQ=255) ttGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 1:925112/1‑140 (MQ=255) ttGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAAAGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 1:6185071/1‑140 (MQ=255) tGGTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAgg < 1:2689335/140‑1 (MQ=255) ggTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCCCGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:7304763/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:5038480/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:1020573/1‑140 (MQ=255) ggTCATCTAAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGAAGTCCAAGTTGTTTTTAAAGACGGAGAGATCAATATGCAGATGCTCATGGGAGAggg > 2:3826388/1‑140 (MQ=255) gTCATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGgt > 2:1628193/1‑140 (MQ=255) cATCTCAATCACATTACGCACGCCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGgtgt < 2:9081171/140‑1 (MQ=255) acgcacgcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:6375925/140‑1 (MQ=255) acgcacgcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:2057931/140‑1 (MQ=255) gcacgcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaaaa < 2:6082676/140‑1 (MQ=255) gcacgcCC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaaaa < 2:8445135/140‑1 (MQ=255) | CCACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CC‑CGGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508997‑3509270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |