BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	581,201	T→C	pseudogene (667/667 nt)	CXP41_RS03085 ←	class I SAM‑dependent methyltransferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	581,201	0	T	C	99.6%	2396.7 / NA	697	pseudogene (667/667 nt)	CXP41_RS03085	class I SAM‑dependent methyltransferase
Reads supporting (aligned to +/- strand): ref base T (1/0); major base C (358/334); minor base A (0/3); total (360/337)
Fisher's exact test for biased strand distribution p-value = 1.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 697 total aligned reads displayed.

ATATCGGGTGTTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑T‑GATGT‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGCCTTTCTGATTGT  >  NZ_CP025268/581069‑581337

atatCGGGTGTTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TAtttt                                                                                                                                    >  1:835450/1‑140 (MQ=255)

       gtgtTGCGGAACCGTGTTGCTCCATCAACTGCACCTGATATTGAGTGGCCGACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAAGATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTg                                                                                                                             <  2:8361003/140‑1 (MQ=255)

               gAACCGTGTTGATACATCAACTGCCCCTGAGATTGAGTGGCCTACGAACCCGGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGaa                                                                                                                     <  2:1570580/140‑1 (MQ=255)

               gAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGaa                                                                                                                     <  1:6142657/140‑1 (MQ=255)

                    gtgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACAt                                                                                                                <  2:3263168/140‑1 (MQ=255)

                    gtgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACAt                                                                                                                <  1:4610782/140‑1 (MQ=255)

                    gtgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACAt                                                                                                                <  2:6474934/140‑1 (MQ=255)

                    gtgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACACTGTCAGGGAGTAATCATTGGGATTATGCAGCAGCACGTCTTTATCAATAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACAt                                                                                                                <  1:3887299/140‑1 (MQ=255)

                     tgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGACCATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACagt                                                                                                               >  1:544216/1‑138 (MQ=255)

                     tgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACAtt                                                                                                               >  1:9346326/1‑140 (MQ=255)

                     tgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACAtt                                                                                                               >  2:4240801/1‑140 (MQ=255)

                     tgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACAtt                                                                                                               >  2:5008627/1‑140 (MQ=255)

                     tgtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACAtt                                                                                                               >  1:206119/1‑140 (MQ=255)

                     tgtTGATAAATCAACTGAACCTGATATTGATAGTCCTACGAACCCTGTCATGGAGTAATCATTGGGATTATGCAGAAGCACGTCTTATGCTAGAACATGCTGCGGT‑T‑TGTGTCTATTTTATTCATGAAGCGGAAAACAtt                                                                                                               >  2:5718211/1‑140 (MQ=255)

                      gtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATta                                                                                                              <  2:3076078/140‑1 (MQ=255)

                      gtTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATta                                                                                                              <  1:4062771/140‑1 (MQ=255)

                          aTACCTCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATtactac                                                                                                          >  2:3840336/1‑140 (MQ=255)

                           tACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACa                                                                                                         <  1:3049074/140‑1 (MQ=255)

                           tACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACa                                                                                                         <  2:8532116/140‑1 (MQ=255)

                           tACATCAACTGCACCAGAGATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACa                                                                                                         <  1:8610830/140‑1 (MQ=255)

                            aCATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAg                                                                                                        <  1:2376974/140‑1 (MQ=255)

                            aCATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAg                                                                                                        >  1:8959704/1‑140 (MQ=255)

                               tCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTAc                                                                                                     >  2:6061094/1‑140 (MQ=255)

                               tCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTAc                                                                                                     >  2:2883435/1‑140 (MQ=255)

                               tCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCGTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAACACATAACTACAGTAc                                                                                                     >  2:9146452/1‑140 (MQ=255)

                               gcAACTGCACCTGATATTGAGTGGCCTACGTACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCCCGTCTTAAGCAAGAACGTGCTGCGGT‑TGGCTGC‑TATTTTTTTGCTGAAGCGGAAAACATTACTACAGTAc                                                                                                     >  2:2505700/2‑140 (MQ=255)

                                    tGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGa                                                                                                >  2:1156348/1‑140 (MQ=255)

                                     gCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGaa                                                                                               >  1:1001321/1‑140 (MQ=255)

                                      cACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCtt                                                                                                  >  2:5926180/1‑136 (MQ=255)

                                      cACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCtt                                                                                                  <  1:5926518/136‑1 (MQ=255)

                                      cACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAAc                                                                                              >  1:9171577/1‑140 (MQ=255)

                                      cACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTAGGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAAc                                                                                              >  2:2251333/1‑140 (MQ=255)

                                        ccTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCt                                                                                            >  2:8930935/1‑140 (MQ=255)

                                            atatTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGt                                                                                        >  2:768384/1‑140 (MQ=255)

                                              atTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGttt                                                                                      >  2:3711602/1‑140 (MQ=255)

                                                tGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCTGAAAACATTACTACAGTACCTTGAACATTGGTTTTa                                                                                    >  1:1386952/1‑140 (MQ=255)

                                                  aGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAAc                                                                                  >  2:7161853/1‑140 (MQ=255)

                                                  aGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAAc                                                                                  >  1:8726536/1‑140 (MQ=255)

                                                   gTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACa                                                                                 >  1:3386060/1‑140 (MQ=255)

                                                    tGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACAt                                                                                >  1:1793259/1‑140 (MQ=255)

                                                    tGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACAt                                                                                >  1:5960090/1‑140 (MQ=255)

                                                      gCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCACGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATtc                                                                              >  2:2678923/1‑140 (MQ=255)

                                                      gCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTCCCTTGAACCTTGGTTTTAACATtc                                                                              >  2:7326810/1‑140 (MQ=255)

                                                      gCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATtc                                                                              >  1:1710966/1‑140 (MQ=255)

                                                      gCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATtc                                                                              <  2:2037953/140‑1 (MQ=255)

                                                       ccTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATtct                                                                             >  1:5284158/1‑140 (MQ=255)

                                                       ccTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATtct                                                                             >  2:3626410/1‑140 (MQ=255)

                                                       ccTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCATGAAGCGGAAAACATTACTAAAGTACCTTGAACCTTGGTTTTAACATtct                                                                             >  2:5346540/1‑140 (MQ=255)

                                                          aCGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGa                                                                          <  1:5054747/140‑1 (MQ=255)

                                                           cGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGaa                                                                         <  1:8005247/140‑1 (MQ=255)

                                                            gaccccTGCCAGGGAGTAATCCTTGGGATTAAGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGTAG‑GATGC‑TATTTTTTTCCAGAAGCGGAAAACATTACTACAGTACCTTCACCCTTGGTTTTAACATTCTCGaaa                                                                        <  2:9434691/137‑1 (MQ=255)

                                                            gAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCt                                                                                            >  1:6297563/1‑120 (MQ=255)

                                                            gAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGaaa                                                                        <  2:3386060/140‑1 (MQ=255)

                                                            gAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGaaa                                                                        <  1:2144378/140‑1 (MQ=255)

                                                            gAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGaaa                                                                        <  2:7049704/140‑1 (MQ=255)

                                                              aCCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATg                                                                      <  1:4996849/140‑1 (MQ=255)

                                                                ccTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGct                                                                    <  1:9043753/140‑1 (MQ=255)

                                                                ccTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGct                                                                    <  2:7851478/140‑1 (MQ=255)

                                                                ccTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGct                                                                    <  1:1505188/140‑1 (MQ=255)

                                                                 cTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctc                                                                   >  1:7511768/1‑140 (MQ=255)

                                                                  tGTCAGTGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctct                                                                  <  2:4700340/140‑1 (MQ=255)

                                                                  tGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGACGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctct                                                                  >  1:975175/1‑140 (MQ=255)

                                                                  tGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGACGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctct                                                                  <  1:6889462/140‑1 (MQ=255)

                                                                  tGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctct                                                                  >  1:8587760/1‑140 (MQ=255)

                                                                  tGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctct                                                                  <  1:7923923/140‑1 (MQ=255)

                                                                  tGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGctct                                                                  <  1:667377/140‑1 (MQ=255)

                                                                   gTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGaa                                                                                                                     >  2:4525614/1‑88 (MQ=255)

                                                                   gTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTg                                                                 >  1:5730197/1‑140 (MQ=255)

                                                                    tCAGGGAGTAATCCTTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCGga                                                                <  2:8152760/140‑1 (MQ=255)

                                                                    tCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTCCAGTACCTTGAACCTTGGTTTTAACAGTCTCGAAATGCTCTga                                                                <  1:6458694/140‑1 (MQ=255)

                                                                    tCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTga                                                                <  1:1579311/140‑1 (MQ=255)

                                                                          aGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGtat                                                          >  1:1198407/1‑140 (MQ=255)

                                                                          aGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGtat                                                          >  1:2207565/1‑140 (MQ=255)

                                                                           gTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGtata                                                         <  1:294172/140‑1 (MQ=255)

                                                                           gTAAACAATGCGATTATGCCTCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGATGCGGAAAACATTACTACAGTACCATGAACCTTGGATTTAACATTCTCGAAATGCTCTGAGAGtata                                                         <  2:6819214/140‑1 (MQ=255)

                                                                           ctAATCATTGGGATTATGCCGCATCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGtata                                                         <  1:7161802/139‑1 (MQ=255)

                                                                            tAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTatat                                                        <  1:7342316/140‑1 (MQ=255)

                                                                              aTCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGTGAGTATAtgt                                                      >  2:9042557/1‑140 (MQ=255)

                                                                              aTCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATAtgt                                                      >  1:4421481/1‑140 (MQ=255)

                                                                              aTCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATAtgt                                                      >  2:4102792/1‑140 (MQ=255)

                                                                              aTCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTGTTAACATTCTCGAAATGCTCTGAGAGTATAtgt                                                      >  2:5093446/1‑140 (MQ=255)

                                                                                 aTTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCGGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGtt                                                   <  1:8115039/140‑1 (MQ=255)

                                                                                   tGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTaa                                                 >  1:1997736/1‑140 (MQ=255)

                                                                                   tGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTaa                                                 <  1:2659781/140‑1 (MQ=255)

                                                                                          aTGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCcttct                                          >  1:4182699/1‑140 (MQ=255)

                                                                                          aTGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCcttct                                          >  1:1292449/1‑140 (MQ=255)

                                                                                           tGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGTTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCcttctt                                         >  2:8066975/1‑140 (MQ=255)

                                                                                           tGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCcttctt                                         >  1:3675010/1‑140 (MQ=255)

                                                                                                cagcaCGTCTTAAGCAAGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGaa                                    >  2:5475281/1‑140 (MQ=255)

                                                                                                                aGAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGaaa                    <  1:4777112/140‑1 (MQ=255)

                                                                                                                 gAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAATCTTTACTACAGTACCTTGAACCTTGGTGTTAACATTCTCGAAATGATCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGaaaa                   >  2:1385017/1‑140 (MQ=255)

                                                                                                                 gAACATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGaaaa                   >  1:7735104/1‑140 (MQ=255)

                                                                                                                  aaCATGCTGCGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAg                  >  2:6248119/1‑140 (MQ=255)

                                                                                                                      tgctgcGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGc              <  1:9488974/140‑1 (MQ=255)

                                                                                                                       gctgcGGT‑TGGATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGcc             >  2:3493393/1‑140 (MQ=255)

                                                                                                                          gcGGT‑TGGATGA‑TATTTTTTTCCTGAAGCTGAAAACATTACTACAGTACCTTTAACCTTGGTTTTAACATTCTCGAAATGCTCTGACAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGCCttt          <  2:1781735/140‑1 (MQ=255)

                                                                                                                             ggttggATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTTCCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGCCTTTCt        <  2:655892/135‑1 (MQ=255)

                                                                                                                              gttggATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGCCTTTCTg       >  1:4520805/5‑140 (MQ=255)

                                                                                                                              gttggATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGCCTTTCTg       >  1:6533780/5‑140 (MQ=255)

                                                                                                                                  gATGC‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTATTGTGTTTGAAAAGATGACTTTCTGATTg   >  2:8709884/1‑140 (MQ=255)

ATATCGGGTGTTGCTGAACCGTGTTGATACATCAACTGCACCTGATATTGAGTGGCCTACGAACCCTGTCAGGGAGTAATCATTGGGATTATGCCGCAGCACGTCTTAAGCAAGAACATGCTGCGGT‑T‑GATGT‑TATTTTTTTCCTGAAGCGGAAAACATTACTACAGTACCTTGAACCTTGGTTTTAACATTCTCGAAATGCTCTGAGAGTATATGTGTTAAGCCTTCTTCGGAATCTTTTGTGTTTGAAAAGATGCCTTTCTGATTGT  >  NZ_CP025268/581069‑581337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`