BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	674,619	T→C	pseudogene (977/977 nt)	ybeQ ←	SEL1‑like repeat protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	674,619	0	T	C	99.8%	1850.0 / NA	531	pseudogene (977/977 nt)	ybeQ	SEL1‑like repeat protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (266/264); minor base A (0/1); total (266/265)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 531 total aligned reads displayed.

CGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTC‑C‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGG  >  NZ_CP025268/674482‑674753

cGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTCATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTa                                                                                                                                        >  1:1537607/1‑140 (MQ=255)

cGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTa                                                                                                                                        >  1:9454716/1‑140 (MQ=255)

cGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTa                                                                                                                                        >  1:6577011/1‑140 (MQ=255)

cGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTa                                                                                                                                        >  2:3853654/1‑140 (MQ=255)

cGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTa                                                                                                                                        >  1:4286746/1‑140 (MQ=255)

  gAAGTGCTGACGCTATGCCCGTAATGTGTTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACCGCAATAAAGAGAATATGGGCCGTATGAAATTCCCCGGCCCGTGTTTTTATGTCTAcc                                                                                                                                      >  2:5416069/1‑139 (MQ=255)

  gAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACa                                                                                                                                      >  1:2076932/1‑140 (MQ=255)

     gTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTa                                                                                                                                   >  2:2287882/1‑140 (MQ=255)

     gTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTa                                                                                                                                   >  1:3965343/1‑140 (MQ=255)

     gTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTa                                                                                                                                   >  2:4313753/1‑140 (MQ=255)

        cTGACGCTATGCCCGAATTGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCACCGGCCCTTGTTTTTATCTCTTCTGTAAAt                                                                                                                                >  2:319517/1‑140 (MQ=255)

          gACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCt                                                                                                                              >  2:739597/1‑140 (MQ=255)

           aCGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCtt                                                                                                                             <  1:4874496/140‑1 (MQ=255)

               tATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGt                                                                                                                         <  1:7276785/140‑1 (MQ=255)

                aTGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtc                                                                                                                        >  1:6684354/1‑140 (MQ=255)

                aTGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtc                                                                                                                        >  2:2367993/1‑140 (MQ=255)

                aTGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGtc                                                                                                                        >  1:3579695/1‑140 (MQ=255)

                aTGCCCGAAAGGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTGCAGtc                                                                                                                        >  1:2260890/1‑140 (MQ=255)

                           gtgGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCTCGAATTTc                                                                                                             >  2:8489266/1‑140 (MQ=255)

                           gtgGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCAACAGTAAATCTTCAGTCTCACGAATTTc                                                                                                             >  2:4441644/1‑140 (MQ=255)

                            tgGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTc‑c                                                                                                           >  2:2849352/1‑140 (MQ=255)

                             ggTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTc‑ct                                                                                                          >  1:5467901/1‑139 (MQ=255)

                              gTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTc‑ctg                                                                                                         >  2:6431492/1‑138 (MQ=255)

                              gTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTc‑ctg                                                                                                         >  1:8303000/1‑138 (MQ=255)

                               tCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTc‑ctga                                                                                                        <  2:1061557/140‑4 (MQ=255)

                                  tGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTg                                                                                                     >  2:1411646/1‑140 (MQ=255)

                                  tGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCACCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTg                                                                                                     >  2:1838302/1‑140 (MQ=255)

                                    aCCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTgactgac                                                                                                   <  1:7162419/140‑1 (MQ=255)

                                    aCCAGTTCCAGAGACGCACGATTGAGCCGTAATAGTCTGATTTCGCAAAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTATATCTTCAGTCTCACGAATTTC‑CTgactgac                                                                                                   <  1:8446789/140‑1 (MQ=255)

                                        gTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACAtct                                                                                               >  2:723144/1‑140 (MQ=255)

                                         ttCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTCCAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACAtctc                                                                                              >  2:5820568/1‑140 (MQ=255)

                                         ttCCAGAGACGCCCGTTTGAGCCGTAATAGTATGATTTCGCACAGCAATAAAGAGAATATGGGACGAATGAAATTACCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTCAT‑GACTGTCAtctc                                                                                              >  1:277215/1‑140 (MQ=255)

                                            cAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTgg                                                                                           <  1:419952/140‑1 (MQ=255)

                                              gagaCGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTgactgac                                                                                                   <  1:1616081/130‑1 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCTCGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:3145596/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACTAATATC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  2:7081377/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:7782417/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  2:2930430/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:5252054/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  2:6571500/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  2:8826607/1‑140 (MQ=255)

                                                   gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCGTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGa                                                                                    >  1:2438796/1‑140 (MQ=255)

                                                    cccGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGAt                                                                                   >  2:3445901/1‑140 (MQ=255)

                                                         ttGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTg                                                                              <  1:5638123/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  2:797710/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  1:1792144/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  1:4387016/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  1:2381175/140‑1 (MQ=255)

                                                           gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                            <  1:2465383/140‑1 (MQ=255)

                                                                 tAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTAc                                                                      >  2:6004651/1‑140 (MQ=255)

                                                                   aTAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGa                                                                    >  1:4107238/1‑140 (MQ=255)

                                                                       tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACa                                                                >  2:4121308/1‑140 (MQ=255)

                                                                         tGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGAAATCTCTGGTTCCGGATGACTGAACTTTACGATACAgg                                                              >  2:9123118/1‑140 (MQ=255)

                                                                           aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTc                                                            >  1:6142675/1‑140 (MQ=255)

                                                                            tttCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATT‑CCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCga                                                          <  1:1002465/140‑1 (MQ=255)

                                                                                gCACAGCAATCAACAGAATCAGGGCCGAATGAAATTCCCCGGCCCTTGTTATTATCTCGACAGTAAATCTTCAGGCCCACGAATTTC‑CGGACTGACATCTCTGGTTCCGTATGACTGAACATTCCGCTCCAGGTCGagag                                                       <  2:7707819/140‑1 (MQ=255)

                                                                                      cAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTc                                                 >  2:4624668/1‑140 (MQ=255)

                                                                                       aaTACAGAGACTATGGGCCGAATGAAATTCCCCTGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACAGCTCTGGTTCCGGATGACTGAACTTTACGATACCGGTCGAGAGCCTGTCg                                                <  2:472002/140‑1 (MQ=255)

                                                                                              agaATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTg                                                                              <  1:2904566/103‑1 (MQ=255)

                                                                                               gaATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGa                                        <  1:3843794/140‑1 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACATTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       <  1:5965196/140‑1 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  2:485826/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  1:643712/1‑140 (MQ=255)

                                                                                                aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                       >  1:7648050/1‑140 (MQ=255)

                                                                                                 atatGGGCCGACCGCAAGTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGAGGACTGACCTTTACGATACCGGTCGCGAGCCTGTCGGAGATCGACa                                      <  2:1704478/140‑1 (MQ=255)

                                                                                                 atatGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACa                                      <  2:2057506/140‑1 (MQ=255)

                                                                                                 atatGGGCCGAATGAAATTCCCCGGCCCGTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACa                                      >  1:3380094/1‑140 (MQ=255)

                                                                                                  tatGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAGTTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAg                                     <  1:3198665/140‑1 (MQ=255)

                                                                                                     gggCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTc                                  >  2:3645884/1‑140 (MQ=255)

                                                                                                        ccGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                               >  1:8693427/1‑140 (MQ=255)

                                                                                                          gAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                      >  1:456605/1‑115 (MQ=255)

                                                                                                          gAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcct                             >  1:300744/1‑140 (MQ=255)

                                                                                                           aaTGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcctt                            <  1:8185187/140‑1 (MQ=255)

                                                                                                             tGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCCGTCGGAGATCGACAGGTCTTCCTtct                          <  1:874928/140‑1 (MQ=255)

                                                                                                              gAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTtctc                         <  2:524529/140‑1 (MQ=255)

                                                                                                                aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTTACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                       <  1:3704991/140‑1 (MQ=255)

                                                                                                                aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                       <  1:3430077/140‑1 (MQ=255)

                                                                                                                aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                       <  2:6657523/140‑1 (MQ=255)

                                                                                                                aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                       <  1:2638253/140‑1 (MQ=255)

                                                                                                                aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                       <  1:1926707/140‑1 (MQ=255)

                                                                                                                  ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                     <  2:9438041/140‑1 (MQ=255)

                                                                                                                   tCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAg                    <  1:6294842/140‑1 (MQ=255)

                                                                                                                     cccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTg                  >  2:8326197/1‑140 (MQ=255)

                                                                                                                       cGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGAt                <  2:5010531/140‑1 (MQ=255)

                                                                                                                          cccTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACa             >  2:3933536/1‑140 (MQ=255)

                                                                                                                          cccTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACa             <  1:7001892/140‑1 (MQ=255)

                                                                                                                               gTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATg        >  1:7939433/1‑140 (MQ=255)

                                                                                                                                tttttATCTCTACCGTAAATCTTCAGTCTCACGAATTTC‑CGGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg       <  1:8543039/140‑1 (MQ=255)

                                                                                                                                tttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg       <  1:4691514/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACCGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  2:280382/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  1:9215901/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  2:2618564/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  1:5145110/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  2:5662001/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc      <  1:1243048/140‑1 (MQ=255)

                                                                                                                                 ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACATTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCGTCCTTCTCCGTAGTGATACATAATGGc      <  1:4621875/140‑1 (MQ=255)

                                                                                                                                    tATCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCGCTGGTTCCGGATGACTGAACTTTAAGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTATTGATACATAATGGCCAg   >  2:7597879/1‑140 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  1:9057362/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAATTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  1:1835047/140‑1 (MQ=255)

                                                                                                                                     aTCTCTACAGTAAATCTTCAGTCTCACGAAGTTC‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg  <  1:5032513/140‑1 (MQ=255)

CGGAAGTGCTGACGCTATGCCCGAAATGTGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTTC‑C‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGG  >  NZ_CP025268/674482‑674753

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`