| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,028,065 | T→C | intergenic (‑41/‑178) | sulA ← / → sxy | cell division inhibitor SulA/CRP‑S regulon transcriptional coactivator Sxy |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,028,065 | 0 | T | C | 99.8% | 1420.5 / NA | 406 | intergenic (‑41/‑178) | sulA/sxy | cell division inhibitor SulA/CRP‑S regulon transcriptional coactivator Sxy |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (210/195); minor base A (0/1); total (210/196) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.83e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 458 total aligned reads displayed.
AAGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGTACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTAA > NZ_CP025268/1027929‑1028201 | aaGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATgtacagcaca > 1:7417808/1‑140 (MQ=255) aGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACAt > 2:3901991/1‑140 (MQ=255) aGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACAt > 2:9003053/1‑140 (MQ=255) aGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGAGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATACTCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACAt > 2:586382/1‑140 (MQ=255) cccGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATcc < 1:3122118/140‑1 (MQ=255) cccGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACAGcc > 2:8197819/1‑140 (MQ=255) cccGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATATTACTTGCTGCGGATGAGAACGACGAAGAACGAAGTGCATATCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTAACTGTATGGATGTACAGCACATcc > 2:7174021/1‑140 (MQ=255) ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt < 1:1015239/140‑1 (MQ=255) ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt > 2:2166359/1‑140 (MQ=255) ggCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGt > 1:1745125/1‑140 (MQ=255) cTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGa < 1:6506484/140‑1 (MQ=255) cTGTAGTGTTTACCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACGGAATCAATGCAGACGATGTGAGTTACTTTATGGATGTAGAGCTCATCCAGTgg > 2:6930027/1‑139 (MQ=255) ttCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGAt < 1:803540/140‑1 (MQ=255) agaCACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTa < 2:8902193/140‑1 (MQ=255) acacGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTAtt > 2:373897/1‑140 (MQ=255) cacGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTAttt > 2:5706804/1‑140 (MQ=255) cacGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTAttt < 1:1480605/140‑1 (MQ=255) cgcgCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTc > 1:8200406/1‑140 (MQ=255) cgcgCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTc > 1:4367338/1‑140 (MQ=255) ttGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCg < 1:8346978/140‑1 (MQ=255) gctgcGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCa > 1:6860954/1‑140 (MQ=255) aaCGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGtt > 1:2574709/1‑140 (MQ=255) aaCGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAAGTTTGTCGtt > 1:7267951/1‑140 (MQ=255) aaCGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGa < 1:1844788/140‑1 (MQ=255) aaCGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGa < 2:1988525/140‑1 (MQ=255) aaCGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGa < 1:3772422/140‑1 (MQ=255) aaCGATGTGCATAGCATGAAGTGTAAATAATCAATCCAGACCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACATAGATCAAACCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGa < 2:5503725/140‑1 (MQ=255) aCGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGaa < 1:904701/140‑1 (MQ=255) aTGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAAc < 1:4719938/140‑1 (MQ=255) aTGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAAc < 1:2869555/140‑1 (MQ=255) tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa > 1:3259114/1‑140 (MQ=255) tgtgCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACa < 1:6890391/140‑1 (MQ=255) cATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATaaa > 1:896459/1‑140 (MQ=255) aTAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAAt < 1:7027413/140‑1 (MQ=255) gCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTaa > 1:2730689/1‑140 (MQ=255) ccTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGACAACATAAATTAAt > 1:7657979/1‑140 (MQ=255) ccTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAAt > 2:3088017/1‑140 (MQ=255) gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATgtacagcaca > 1:7502955/1‑55 (MQ=255) gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGACAACATAAATTAATCtt > 2:7992197/1‑140 (MQ=255) gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCtt > 1:7114162/1‑140 (MQ=255) gAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCtt > 2:4899215/1‑140 (MQ=255) aGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATACATTAATCTTGc > 2:7683876/1‑140 (MQ=255) aGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGc < 2:1745125/140‑1 (MQ=255) aGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGc > 1:8727720/1‑140 (MQ=255) gtACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGcccc < 2:2425714/140‑1 (MQ=255) tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt > 1:5069874/1‑140 (MQ=255) tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt > 1:8474214/1‑140 (MQ=255) tACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATGTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt < 2:1438032/140‑1 (MQ=255) tACATAAACAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt < 1:9193205/140‑1 (MQ=255) gaCATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGAACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATATTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCt < 2:7572121/139‑1 (MQ=255) aCATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGACAACATAATTTAATCTTGCCCCtt > 1:9536656/1‑140 (MQ=255) aCATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCtt > 2:639744/1‑140 (MQ=255) tAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAg < 2:4658822/140‑1 (MQ=255) aatcaatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGa > 1:6431226/1‑140 (MQ=255) caatcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAATCATAAATTAATCTTGCCCCTTAAGAATa > 2:9245538/1‑140 (MQ=255) atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAATATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg > 2:1752599/1‑140 (MQ=255) atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg > 1:1236812/1‑140 (MQ=255) atcCAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAg > 1:4224715/1‑140 (MQ=255) cAGCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTg > 1:8778962/1‑140 (MQ=255) gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc < 1:2139715/140‑1 (MQ=255) gCCCCTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGcc > 2:3369270/1‑140 (MQ=255) ccccTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCt > 1:5505177/1‑140 (MQ=255) cccTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTa < 1:5173920/140‑1 (MQ=255) cccTGTGAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTa < 2:6339573/140‑1 (MQ=255) tgtgAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTAttt < 2:1002894/140‑1 (MQ=255) gtgAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTAtttt > 1:1626316/1‑140 (MQ=255) gtgAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTAtttt > 2:9088409/1‑140 (MQ=255) gtgAGTTACTGTATGGATGTAAAGCACATCCAGTGACAACAAATATCAACCCTATTTTCTGAAAGATCCGCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATATTGACCCTTAAGAATAAGATGCCTCtttt > 2:7447317/1‑140 (MQ=255) gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg < 1:3434295/140‑1 (MQ=255) gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg < 2:5254328/140‑1 (MQ=255) gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg < 1:660643/140‑1 (MQ=255) gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg < 1:3361073/140‑1 (MQ=255) gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg < 1:1987705/140‑1 (MQ=255) gAGTTACTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCg < 1:940959/140‑1 (MQ=255) cTGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTa > 2:1264164/1‑140 (MQ=255) tGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAACACATAAATTAATCTTGCCCCTTACGAATAAGTTGCCTATTTTCGTAGttca > 1:5746267/1‑138 (MQ=255) tGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTaa < 2:4223921/140‑1 (MQ=255) tGTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTaa < 2:5970759/140‑1 (MQ=255) gTATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAAc < 2:1567036/140‑1 (MQ=255) tATGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACg > 1:8565061/1‑140 (MQ=255) aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATCAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAActg < 2:4357984/140‑3 (MQ=255) aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg < 1:600536/140‑1 (MQ=255) aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg < 2:2730689/140‑1 (MQ=255) aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg < 1:6179290/140‑1 (MQ=255) aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg < 2:8531589/140‑1 (MQ=255) aTGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACgg < 1:4067686/140‑1 (MQ=255) aTGGAAGAACACCACATCCAGTGACAACAAAGATCAACACTATTTTCGGAAAGAGCCTCTCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGGTGCCTATTTTCGTAGTTAACgg < 1:9334199/140‑1 (MQ=255) tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATACATTAATCTTGCCCCTTAAGAATAAGTTGCATATTTTCGTAGTTAACGGa > 2:6721463/1‑140 (MQ=255) tGGATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGa > 1:7845814/1‑140 (MQ=255) gATGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATc > 2:503034/1‑140 (MQ=255) tGTACAGCACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCg < 2:3641569/140‑1 (MQ=255) gtacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTGAACGGATCCgg < 2:5130829/140‑2 (MQ=255) tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAATCATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt > 2:7821400/1‑140 (MQ=255) tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt > 2:3248106/1‑140 (MQ=255) tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGtt > 2:3777393/1‑140 (MQ=255) tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATGTTCGTAGTTAACGGATCCGtt > 1:5830823/1‑140 (MQ=255) tacagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATGTTCGTAGTTAACGGATCCGtt > 2:9436408/1‑140 (MQ=255) cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCTGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGACCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATACGTTaa > 1:4172229/1‑140 (MQ=255) cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTaa > 1:2241859/1‑140 (MQ=255) cagcacaTCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTaa > 1:4939008/1‑140 (MQ=255) | AAGCCCGGCTGTAGTGTTTTCCGTAGAGACACGCGCAATTTTACTTGCTGCGGATGAGAACGACGAAGAACGATGTGCATAGCCTGAAGTGTACATAATCAATCCAGCCCCTGTGAGTTACTGTATGGATGTACAGTACATCCAGTGACAACAAAGATCAACCCTATTTTCGGAAAGAGCCTCGCAAATTTTGTCGTTGGTGACGGGAAAACATAAATTAATCTTGCCCCTTAAGAATAAGTTGCCTATTTTCGTAGTTAACGGATCCGTTAA > NZ_CP025268/1027929‑1028201 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |