| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,072,991 | T→C | *410* (TAA→TAG) | CXP41_RS11040 ← | IS3‑like element IS2 family transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,072,991 | 0 | T | C | 99.8% | 2134.0 / NA | 621 | *410* (TAA→TAG) | CXP41_RS11040 | IS3‑like element IS2 family transposase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (390/229); minor base A (0/1); total (391/230) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.71e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 621 total aligned reads displayed.
GTTATTGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCTTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCA > NZ_CP025268/2072854‑2073117 | gTTATTGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCta > 1:4090729/1‑140 (MQ=255) ttATTGACCAACAAACATTGCAGTACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCtat < 2:388447/140‑1 (MQ=255) aTTGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTatat > 1:5453283/1‑140 (MQ=255) aTTGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTatat > 1:8902000/1‑140 (MQ=255) aTTGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTatat > 1:2644371/1‑140 (MQ=255) aTTGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTatat < 2:1332148/140‑1 (MQ=255) aTTGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTatat > 1:6076385/1‑140 (MQ=255) tGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATAttt < 2:3435554/140‑1 (MQ=255) tGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATAttt > 1:4866932/1‑140 (MQ=255) tGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATAttt > 1:5480520/1‑140 (MQ=255) tGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATAttt > 2:4891741/1‑140 (MQ=255) tGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATAttt > 1:7503173/1‑140 (MQ=255) tGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCAGTCGTGGCTGGATTTGCCCCTATAttt > 2:288189/1‑140 (MQ=255) ccAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCACCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCa < 1:4192959/140‑1 (MQ=255) aacaaacaTTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGa > 1:6642918/1‑140 (MQ=255) aacaaacaTTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGa > 1:8656044/1‑140 (MQ=255) acaaacaTTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGAc < 2:7913925/140‑1 (MQ=255) caaacaTTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACa < 2:569651/140‑1 (MQ=255) caaacaTTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACa < 2:1183040/140‑1 (MQ=255) caaacaTTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACa > 1:830428/1‑140 (MQ=255) aaacaTTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACAt < 1:3024388/140‑1 (MQ=255) aacaTTGCAGAACTCCACCAATGCCTCCATAGACGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCATATATTTCCAGACATc < 2:4549219/140‑1 (MQ=255) aTTGCAGAACTCCACCAAAGCCTCCATAGGCGTTAATTTGCAGGACATCCCCGGAGTAGAGATAACAGTCAACTCCTTGGCAGGGCGTAAAC‑AAATCCGCATTCGAGGCTGGATTTTCCCCTCTATTTCCAGACATCTGt > 2:1516570/1‑140 (MQ=255) ttGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGtt < 2:4338704/140‑1 (MQ=255) ttGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGtt > 2:7208236/1‑140 (MQ=255) tGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTa < 2:7414168/140‑1 (MQ=255) cAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATc > 2:415387/1‑140 (MQ=255) gAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCAc > 1:1023017/1‑140 (MQ=255) aaCTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACt < 2:3989233/140‑1 (MQ=255) aaCTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACt < 2:9296287/140‑1 (MQ=255) caccaATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACt > 2:8783524/1‑135 (MQ=255) caccaATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAcc > 1:1463457/1‑140 (MQ=255) caccaATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAcc > 2:4965628/1‑140 (MQ=255) caccaATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAcc > 2:5279618/1‑140 (MQ=255) caccaATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAcc < 2:5480520/140‑1 (MQ=255) caccaATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAcc < 2:6771665/140‑1 (MQ=255) accaATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAACAAAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAAcc < 1:1954616/140‑1 (MQ=255) ccaATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCa > 1:2269851/1‑140 (MQ=255) tGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTGAACCCATTAc > 1:8363193/1‑140 (MQ=255) gCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACAt > 1:3612626/1‑117 (MQ=255) gCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACa > 2:7641454/1‑140 (MQ=255) ccTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACaa > 1:9283682/1‑140 (MQ=255) cATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGccc > 2:1724576/1‑140 (MQ=255) cATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGccc > 1:440650/1‑140 (MQ=255) cATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGccc > 1:8136171/1‑140 (MQ=255) aGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCATACATCTGTTATCACTTAACCCATTACAAGCCCGCt > 2:3197196/1‑140 (MQ=255) aTAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGc > 1:7146142/1‑140 (MQ=255) aTAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGc > 1:3455043/1‑140 (MQ=255) aTTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGa < 1:7024877/140‑1 (MQ=255) aTTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGa < 2:3589268/140‑1 (MQ=255) gCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATAtt > 2:8630546/1‑140 (MQ=255) gACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGTCCGTTATC‑CAATCCGCATTCGTGGCTGGATTTGGCCCTATATGGCGAGACATCTGTTATCTCTTTACCCCTTTCAAGCGCGCTGCCGCAGATATTCCCg > 2:8101766/1‑140 (MQ=25) aTCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTgg < 1:2751772/140‑1 (MQ=255) aTCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCAGTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTgg < 2:6955418/140‑1 (MQ=255) ccccGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATCTTCCCGTGgcg > 2:1856775/1‑140 (MQ=255) ccccGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGgcg < 1:572986/140‑1 (MQ=255) ccGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGgcgag < 1:3217183/140‑1 (MQ=255) gAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGgcgagcga < 1:3370349/140‑1 (MQ=255) gTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATa < 1:3572932/140‑1 (MQ=255) tAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATaa > 1:3962115/1‑140 (MQ=255) gagaTAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAAcc > 2:2334972/1‑140 (MQ=255) gagaTAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAAcc > 2:3095056/1‑140 (MQ=255) aTAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAg > 2:8947083/1‑140 (MQ=255) aTAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAg < 1:6281582/140‑1 (MQ=255) aaCAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAgcg < 1:6759166/140‑1 (MQ=255) aaCAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAgcg < 1:7741836/140‑1 (MQ=255) aCAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAgcgc > 2:7471044/1‑140 (MQ=255) aCAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAgcgc > 2:7023543/1‑140 (MQ=255) aCAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAgcgc > 1:7630180/1‑140 (MQ=255) aGACATCTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCACTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCAc < 1:4545086/140‑1 (MQ=255) aGACAACTCCTTGGCAGGCCGTAAAC‑AATTCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCAc < 1:5551680/140‑1 (MQ=255) aGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGGTATCACTTTACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATGACACAGCGCag > 2:6407243/1‑139 (MQ=18) aCAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTa > 1:2160079/1‑140 (MQ=255) aaCTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATg > 1:9475715/1‑140 (MQ=255) aaCTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATg > 1:5063476/1‑140 (MQ=255) aCTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGc > 1:4931941/1‑140 (MQ=255) aCTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCAGTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGc > 2:8405726/1‑140 (MQ=255) tCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCgg > 2:6210179/1‑140 (MQ=255) cTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTCCAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGAt < 1:6420790/140‑1 (MQ=255) cTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGAt < 1:2474908/140‑1 (MQ=255) cTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTAACAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGAt > 2:5069730/1‑140 (MQ=255) ggCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGcc < 1:171432/140‑1 (MQ=255) ggCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGcc < 1:4679960/140‑1 (MQ=255) ggCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGcc < 2:4395982/140‑1 (MQ=255) ggCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGcc < 2:2124702/140‑1 (MQ=255) gCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCa < 1:5905356/140‑1 (MQ=255) aGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCAtt < 2:5843781/140‑1 (MQ=255) gCCGTAAAC‑AACTCCGCATTCGTGGCTGGATGTGCCCCTATATTTCCCGACATCTGTTATCACTTAACCCATTACCAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCg < 2:6569318/140‑1 (MQ=17) gCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTCTCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTCTGCGGATGCCATTCg > 2:8667523/1‑140 (MQ=255) gCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCg > 1:8603952/1‑140 (MQ=255) gCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCg > 2:2269104/1‑140 (MQ=255) gCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCg > 2:5202266/1‑140 (MQ=255) gTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTta < 2:373585/140‑1 (MQ=255) cGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCCGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGaa < 2:9197535/140‑1 (MQ=255) cGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGaa < 1:8999565/140‑1 (MQ=255) cGCATTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGaa < 2:6039435/140‑1 (MQ=255) aTTCGTGGCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCTCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGc > 2:2022636/1‑140 (MQ=255) ggCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGc > 1:7980630/1‑140 (MQ=14) gCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCa < 2:2650541/140‑1 (MQ=11) gCTGGATTTGCCCCTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCa < 2:9432570/140‑1 (MQ=11) | GTTATTGACCAACAAACATTGCAGAACTCCACCAATGCCTCCATAGCCGATAATTTGCAGGACATCCCCGGAGTAGAGATAACAGACAACTCCTTGGCAGGCCGTAAAC‑AAATCCGCATTCGTGGCTGGATTTGCCCTTATATTTCCAGACATCTGTTATCACTTAACCCATTACAAGCCCGCTGCCGCAGATATTCCCGTGGCGAGCGATAACCCAGCGCACTATGCGGATGCCATTCGTTATAATGCTCGAACGCCTCTGCA > NZ_CP025268/2072854‑2073117 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |