| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,135,706 | C→T | G135D (GGC→GAC) | wcaC ← | colanic acid biosynthesis glycosyltransferase WcaC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,135,706 | 0 | C | T | 99.6% | 2089.8 / NA | 539 | G135D (GGC→GAC) | wcaC | colanic acid biosynthesis glycosyltransferase WcaC |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (245/292); minor base A (0/2); total (245/294) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 539 total aligned reads displayed.
GTTTGCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGCCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGT > NZ_CP025268/2135569‑2135842 | gTTTGCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCg > 2:4756627/1‑140 (MQ=255) tGCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGc < 2:2377/140‑1 (MQ=255) tGCCCGCCACCAGGTGGTGTGCGCGAGCACTCTTCACCGGCGGCTAGTTATTGCAGGTCGGGCATTTCTGGCAGCCTGTTTTCCTGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGc > 2:9022945/1‑140 (MQ=255) gCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTCAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCa < 2:2912835/140‑1 (MQ=255) gCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCa < 2:8421679/140‑1 (MQ=255) gCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCa < 1:7897765/140‑1 (MQ=255) gCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCa < 2:6087522/140‑1 (MQ=255) gCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCa < 2:2164287/140‑1 (MQ=255) gCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCa < 1:3662151/140‑1 (MQ=255) gCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCa < 2:4398866/140‑1 (MQ=255) gCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTAATTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCa < 1:7772436/140‑1 (MQ=255) cccGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCTACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAg > 2:8024263/1‑140 (MQ=255) ccGCCACCAGTTGGTGTGCGCGATCAATNTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGc < 1:5557067/140‑1 (MQ=255) ccaccaGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTc < 1:6008860/140‑1 (MQ=255) ccaccaGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTc < 2:1164129/140‑1 (MQ=255) caccaGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTcc < 1:7161114/140‑1 (MQ=255) aGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTccagac < 1:6830958/140‑1 (MQ=255) aGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTccagac < 1:6706769/140‑1 (MQ=255) ttGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTccagacca > 2:100563/1‑140 (MQ=255) gtgCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTg < 2:4202951/140‑1 (MQ=255) cgcgATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACg > 2:7744348/1‑140 (MQ=255) cgcgATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACg > 1:4002777/1‑140 (MQ=255) cgATCAATCTTCTCCGGCGGATAGTTATTTCAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTc < 2:7945061/140‑1 (MQ=255) cgATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTc > 1:1551889/1‑140 (MQ=255) aTCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCg < 1:3044597/140‑1 (MQ=255) tCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCa < 2:1868975/115‑1 (MQ=255) tCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCa > 1:1869453/1‑115 (MQ=255) tCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCgg > 1:1813480/1‑140 (MQ=255) aCCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGtt > 1:1015853/1‑140 (MQ=255) ccGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGttt > 1:9397424/1‑140 (MQ=255) ccGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGttt > 1:5772498/1‑140 (MQ=255) cggATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCa > 1:4455520/1‑140 (MQ=255) tAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACttt > 1:6158586/1‑140 (MQ=255) tATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCg < 1:2299029/140‑1 (MQ=255) aGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAg < 2:9191656/140‑1 (MQ=255) aGGTCGGGCATGTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGGCCAGACCAGAGTGACGTCCGGTTTCTGGTTTTTCACTTTTTCGCAAAAg < 2:8115450/140‑1 (MQ=255) ggTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAgc > 1:656355/1‑140 (MQ=255) tCGGGCATTTCTGGCAGCCTGTTTTCAAGCCTTCGCAACCGTCGGTAAAGTCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGATTATGGTTTTTCACTATTACGCAAAAgcgc > 2:3614398/1‑140 (MQ=255) ggCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTACAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCACAAGCGcacc > 2:6572413/1‑140 (MQ=255) ggCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCCGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGcacc > 2:9331420/1‑140 (MQ=255) ggCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGcacc > 1:8178159/1‑140 (MQ=255) ggCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGcacc > 1:7645444/1‑140 (MQ=255) ggCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGcacc > 1:5030081/1‑140 (MQ=255) gCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGcacca < 2:3452409/140‑1 (MQ=255) gCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGcacca < 2:7474437/140‑1 (MQ=255) cATTTCTGGTAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTGCTGTGGTCGTGCAGCGTCCAGACCAGAGTGTCGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGatccac < 2:2541334/140‑1 (MQ=255) cATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGcaccac < 2:8140239/140‑1 (MQ=255) cATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGcaccac < 1:3286807/140‑1 (MQ=255) atctCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGCCCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACg < 1:2224952/137‑1 (MQ=255) tttCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGc < 1:2432057/140‑1 (MQ=255) tttCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGc < 2:5214931/140‑1 (MQ=255) tGGCAGCCTGATTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCtt < 2:5424275/140‑1 (MQ=255) cctgaagtCCACCCTCCGCAACCGTCGGTACAGGCGCAGCGTCCGCTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTGAAGAtt < 2:6673975/133‑1 (MQ=255) ccTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGAtt < 1:3923996/140‑1 (MQ=255) tGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTa < 2:1491263/140‑1 (MQ=255) tGTTTTCCAGCCGTCGCACCCGTCGGTAAAGGCGCAGCGTCCGGGAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTa < 2:7238233/140‑1 (MQ=255) tttCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGcc < 1:3791901/140‑1 (MQ=255) tgtCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGcc < 2:5957155/138‑1 (MQ=255) tCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAg < 1:5435442/140‑1 (MQ=255) gCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGc > 1:1699339/1‑140 (MQ=255) tCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCtgtg < 1:4786503/140‑1 (MQ=255) tCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCtgtg < 2:5782952/140‑1 (MQ=255) tCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCtgtg < 2:4979912/140‑1 (MQ=255) tCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCtgtg < 2:4521293/140‑1 (MQ=255) cAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTgcag < 2:1682109/140‑1 (MQ=255) aCCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTgcagca < 2:6982816/140‑1 (MQ=255) gTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACAt < 1:8628410/140‑1 (MQ=255) gTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACAt < 1:4641028/140‑1 (MQ=255) tCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCAAATg > 1:2696326/1‑140 (MQ=255) ggTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGaa < 1:7344352/140‑1 (MQ=255) ggTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGaa > 2:6879204/1‑140 (MQ=255) cgcAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAgg < 2:1227938/140‑1 (MQ=255) cgcAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAgg < 1:5745448/140‑1 (MQ=255) cgcAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAgg > 2:1818044/1‑140 (MQ=255) cgcAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAgg < 2:7108201/140‑1 (MQ=255) cAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGac > 1:5319954/1‑140 (MQ=255) cAGCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGac > 2:2771023/1‑140 (MQ=255) gCGTCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGacca > 2:6719942/1‑140 (MQ=255) tCCGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCg > 2:2129343/1‑140 (MQ=255) ccGGTAACACTCCAGTGGTCGTGCAGNGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAACAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCgg < 1:6353194/140‑1 (MQ=255) ccGGTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTGTTTCGCAAAAGCGCACCACGCTCTTCAGATTTAGCCAGTAGCTGTGCAGCACATGAAAAGGCAGGACCACCgg > 2:8305576/1‑140 (MQ=255) ggTAACACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGAc < 1:3397914/140‑1 (MQ=255) aaCCCTCCAGTGGACGTGCAGCGTCCAGCCCAGAGTGACGTCCGGATTAGGGTTTTTCACTTGTTCGCTAAAGCGCAACACGCTCTTAAGAGTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCg < 2:1334848/140‑1 (MQ=255) aaCACTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCg < 2:5105562/140‑1 (MQ=255) acacTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGc < 2:2064269/140‑1 (MQ=255) acacTCCAGAGGTCGGCCAGCGACCAGACCCGAGTGCCGACCGGAGTATGCTTTTTCACATTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCCGTAGCTGTGCAGCACATGAAAATGCAGGACCCCCGGACCCGc < 2:7651920/140‑1 (MQ=255) cacTCCAGTGGTCGAGCAGCGTCCAGACCAGAGAGACGTCCGGTTTATGGTTTTTCACTTTTTCGCACAAGCGCACCACGCTCTTCAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCt < 2:8645773/140‑1 (MQ=255) cTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCtgt > 2:5647956/1‑140 (MQ=255) cTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCtgt < 1:1253348/140‑1 (MQ=255) cTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCtgt < 1:8341282/140‑1 (MQ=255) cTCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTACACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTCGCCAGTAGCTGTGCAGCTCATGAAAATGCAGGACCACCGGACCCGCtgt < 2:386466/140‑1 (MQ=255) tCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTACGATTTGGCCAGTCGCTGTGCAGCACCTGAAAATGCAGGACCACCGGACCCGCtgtg > 1:6944317/1‑140 (MQ=255) tCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCtgtg > 1:2060454/1‑140 (MQ=255) tCCAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCtgtg > 2:6238859/1‑140 (MQ=255) cAGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCg < 2:4127336/140‑1 (MQ=255) aGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGa > 1:883724/1‑140 (MQ=255) aGTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACAGGAAAATGCAGGACCACCGGACCCGCTGTGCGa > 1:810564/1‑140 (MQ=255) gTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAg < 2:3166772/140‑1 (MQ=255) gTGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAg > 1:9192296/1‑140 (MQ=255) tGGTCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGt < 1:8724515/140‑1 (MQ=255) | GTTTGCCCGCCACCAGTTGGTGTGCGCGATCAATCTTCACCGGCGGATAGTTATTTAAGGTCGGGCATTTCTGGCAGCCTGTTTTCCAGCCTTCGCAACCGTCGGTAAAGGCGCAGCGTCCGGTAACACTCCAGTGGCCGTGCAGCGTCCAGACCAGAGTGACGTCCGGTTTATGGTTTTTCACTTTTTCGCAAAAGCGCACCACGCTCTTAAGATTTAGCCAGTAGCTGTGCAGCACATGAAAATGCAGGACCACCGGACCCGCTGTGCGAGT > NZ_CP025268/2135569‑2135842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |