Predicted mutation
evidence seq id position mutation annotation gene description
RA NZ_CP025268 3,588,057 T→C I143T (ATT→ACT) 
*248* (TAA→TAG
yhhA →
ugpQ ←
DUF2756 family protein
glycerophosphodiester phosphodiesterase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0252683,588,0570TC100.0% 1495.1 / NA 429I143T (ATT→ACT) 
*248* (TAA→TAG
yhhA
ugpQ
DUF2756 family protein
glycerophosphodiester phosphodiesterase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (192/237);  total (192/237)

Only 100 of 437 total aligned reads displayed.

CAACACCAACGGCGGGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAATTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTC  >  NZ_CP025268/3587920‑3588192
                                                                                                                                         |                                                                                                                                       
cAACACCAACGGCGGGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAacta                                                                                                                                       <  2:1407712/140‑1 (MQ=255)
cAACACCAACGGCGGGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAacta                                                                                                                                       <  1:5401540/140‑1 (MQ=255)
  acacCAACGGCGGGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAactatt                                                                                                                                     <  2:3126406/140‑1 (MQ=255)
  acacCAACGGCGGGATGTTAAACAGCAACCGTAATCAGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAactatt                                                                                                                                     <  2:7125756/140‑1 (MQ=255)
   cacCAACGGCGGGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTg                                                                                                                                    >  1:1636976/1‑140 (MQ=255)
   cacCAACGGCGGGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTGGAAAACTCTTg                                                                                                                                    >  2:6514498/1‑140 (MQ=255)
      cAACGGCGGGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGc                                                                                                                                 >  2:1867788/1‑140 (MQ=255)
        aCGGCGGGATGTTAAACAGCAACCGAAATCCGGATAGTTCGTTGAATCAGCAGCATAAGCAGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCg                                                                                                                               >  2:6314436/1‑140 (MQ=255)
         cggcggGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGt                                                                                                                              <  1:6883732/140‑1 (MQ=255)
              ggATGTTAAACAGCAACCGTAATCCGGATAGGTAGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGt                                                                                                                         >  1:7941357/1‑140 (MQ=255)
               gATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGtt                                                                                                                        <  1:1022519/140‑1 (MQ=255)
               gATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGtt                                                                                                                        <  1:8560777/140‑1 (MQ=255)
               gATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGtt                                                                                                                        <  2:3400115/140‑1 (MQ=255)
                   ttAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGa                                                                                                                    <  1:8464532/140‑1 (MQ=255)
                        cAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAAt                                                                                                               <  1:5640752/140‑1 (MQ=255)
                           cAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCCGCACGCCGCAGCCTGACATGCCGTTGAAAACTATTGGGCCGGAAAGTTCGGACCacgctc                                                                                                            >  1:7800710/1‑135 (MQ=255)
                           cAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCAc                                                                                                            >  1:7173408/1‑140 (MQ=255)
                           cAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCAc                                                                                                            >  1:4908297/1‑140 (MQ=255)
                             cccGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGt                                                                                                          >  2:2964102/2‑140 (MQ=255)
                             aCCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACga                                                                                                          >  2:9356359/1‑139 (MQ=255)
                             aCCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGt                                                                                                          >  1:6571054/1‑140 (MQ=255)
                             aCCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGt                                                                                                          >  1:3856651/1‑140 (MQ=255)
                                 tAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGACAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAAt                                                                                                      <  2:3813800/140‑1 (MQ=255)
                                 tAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAAt                                                                                                      <  2:8958430/140‑1 (MQ=255)
                                 tAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAAt                                                                                                      <  2:1734073/140‑1 (MQ=255)
                                 tAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAAt                                                                                                      <  1:3552741/140‑1 (MQ=255)
                                   aTCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCg                                                                                                    <  1:3014478/140‑1 (MQ=255)
                                     ccGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCa                                                                                                  <  2:5568629/140‑1 (MQ=255)
                                      cGGATATTTCGTTGAATCAGCAGCATATGCTGCCTGAGAGTATAAAAGGCGACATGCTGAATCAGCCCTGCACGCCTCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCAt                                                                                                 <  1:1900034/140‑1 (MQ=255)
                                      cGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCAt                                                                                                 <  1:353362/140‑1 (MQ=255)
                                      cGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCAt                                                                                                 <  2:1980219/140‑1 (MQ=255)
                                      cGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCAt                                                                                                 <  2:5283414/140‑1 (MQ=255)
                                      cGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCAt                                                                                                 <  1:4360971/140‑1 (MQ=255)
                                       ggATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATc                                                                                                <  1:2103610/140‑1 (MQ=255)
                                       ggATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATc                                                                                                <  1:4638197/140‑1 (MQ=255)
                                         aTAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCgg                                                                                              >  1:9431466/1‑140 (MQ=255)
                                         aTAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCgg                                                                                              >  1:5079760/1‑140 (MQ=255)
                                         aTAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCgg                                                                                              >  1:6341329/1‑140 (MQ=255)
                                           aGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGCACCGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACGATTGGGCCGTAAAGTTCGGACCACTCCCGTCAAGCGCAGCGGtc                                                                                            >  2:5911027/1‑139 (MQ=255)
                                            gTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTAc                                                                                           <  2:7395015/140‑1 (MQ=255)
                                             ttCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACa                                                                                          >  2:8525594/1‑140 (MQ=255)
                                             ttCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACa                                                                                          >  1:7730480/1‑140 (MQ=255)
                                               cGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTAGTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGa                                                                                        <  2:5386752/140‑1 (MQ=255)
                                                 ttGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGGCAATCGCATCGGTACAGATg                                                                                      <  1:6277488/140‑1 (MQ=255)
                                                  tGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGc                                                                                     >  1:4796411/1‑140 (MQ=255)
                                                   gAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCa                                                                                    <  2:9241394/140‑1 (MQ=255)
                                                   gAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCa                                                                                    <  2:487365/140‑1 (MQ=255)
                                                      tCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATc                                                                                 >  2:5221750/1‑140 (MQ=255)
                                                        agcagcATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCTGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCca                                                                               <  2:8016422/140‑1 (MQ=255)
                                                        agcagcATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCca                                                                               <  1:8737121/140‑1 (MQ=255)
                                                        agcagcATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCca                                                                               <  2:4590810/140‑1 (MQ=255)
                                                           agcaTATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACTTCAATCGCATCGGTACAGAGGCAATCCacac                                                                            <  2:1324632/140‑1 (MQ=255)
                                                           agcaTATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCacac                                                                            <  1:1144978/140‑1 (MQ=255)
                                                              atatGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCACTCGCATCGGTACAGATGCAATCCACAcccc                                                                         >  2:9056881/1‑140 (MQ=255)
                                                                  gctgcCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAgcg                                                                     <  1:1827391/140‑1 (MQ=255)
                                                                   ctgcCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAgcgc                                                                    <  1:4222417/140‑1 (MQ=255)
                                                                    tgcCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTCTTGGGCCGTACAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCgca                                                                   >  2:7809606/1‑140 (MQ=255)
                                                                     gcCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTACAGTTCGGACCAATCACGTCACTCGCAGCGGTACAGATGCAATCCACACCCCAGCgcag                                                                  >  2:3260620/1‑140 (MQ=255)
                                                                     gcCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCgcag                                                                  <  1:6101586/140‑1 (MQ=255)
                                                                       cGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCgcagca                                                                >  1:3958427/1‑140 (MQ=255)
                                                                        ggagaggagaAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTCTTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCaa                                                               <  1:8883665/140‑1 (MQ=255)
                                                                          agaggagaAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAAct                                                             <  2:2535389/140‑1 (MQ=255)
                                                                           gaggagaAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGGACAGATGCAATCCACACCCCAGCGCAGCAActc                                                            >  1:2799407/1‑140 (MQ=255)
                                                                                  aaCGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCGGCCATTCCGTGGACAACTATTGGGCCGTCACGTTCGGCCCAATCACGTCCATCGCATCGGTCCCGATGCAATCCACACCCCAGCGCAGCAACTCGGCTgcg                                                     <  2:4119093/140‑1 (MQ=255)
                                                                                    cGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTgcgcg                                                   <  1:6651227/140‑1 (MQ=255)
                                                                                    cGGCGACAAGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCGGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTgcgcg                                                   <  2:8221575/140‑1 (MQ=255)
                                                                                      gCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCt                                                 <  1:2446309/140‑1 (MQ=255)
                                                                                      gCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCt                                                 <  2:8788278/140‑1 (MQ=255)
                                                                                       cGACACGCGGACTCCCCCCAGCACGCCGCCGCCTGCCCTTCCGTTGAACCCGCCAGCGCCGTAAAGTTCGGACCACACTCGTCAAGCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTg                                                <  2:8673835/140‑1 (MQ=255)
                                                                                        gACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACTCCCCAGCGCAGCAACTCTGCTGCGCGCTgg                                               >  1:1721448/1‑140 (MQ=255)
                                                                                        gACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCACCTCTGCTGCGCGCTgg                                               >  1:9160307/1‑140 (MQ=255)
                                                                                                 aaTCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGtgtggat                                      <  1:7521857/140‑7 (MQ=255)
                                                                                                  aTCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGa                                     <  1:3794602/140‑1 (MQ=255)
                                                                                                  aTCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGa                                     <  1:1476341/140‑1 (MQ=255)
                                                                                                   tCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGAc                                    >  1:69229/1‑140 (MQ=255)
                                                                                                      gCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGt                                 >  2:1633446/1‑140 (MQ=255)
                                                                                                      gCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGt                                 <  1:2940061/140‑1 (MQ=255)
                                                                                                       cccAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTGTATTGACggga                                >  1:5842621/1‑138 (MQ=255)
                                                                                                        ccAGCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGtat                               <  2:2788407/140‑1 (MQ=255)
                                                                                                         cAGCACGCCGCAGCCTGACATTCCGTTGAAAACTCTGGGGCCGTAAAGTTCGGACCAATCACGTCACTCGCATCGGTACCGATGCAATCCACACCCCAGCGCAGCACCTCGGCTGCGCGCTGGGGTTTATTGACGGtata                              <  2:1080129/140‑1 (MQ=255)
                                                                                                           gCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCTACTCTGCTGCGCGCTGGGGTTTATTGACGGTATaaa                            >  1:8185959/1‑140 (MQ=255)
                                                                                                           gCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATaaa                            >  1:1310225/1‑140 (MQ=255)
                                                                                                           gCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATaaa                            >  2:2227041/1‑140 (MQ=255)
                                                                                                           gCACGCCGCAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAAATCTGCTGAGCGCTGGGGTTTATTGACgggagaat                            >  2:6915538/1‑134 (MQ=255)
                                                                                                               gccgcAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAg                        >  1:4422649/1‑140 (MQ=255)
                                                                                                                 cgcAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACAcc                                                                           >  2:4689105/1‑87 (MQ=255)
                                                                                                                 cgcAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGTCGGTATAAACCAGaa                      >  1:8663898/1‑140 (MQ=255)
                                                                                                                 cgcAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGaa                      >  2:3566904/1‑140 (MQ=255)
                                                                                                                 cgcAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGaa                      >  2:1252177/1‑140 (MQ=255)
                                                                                                                 cgcAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGaa                      >  2:8924106/1‑140 (MQ=255)
                                                                                                                 cgcAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGaa                      >  1:7270585/1‑140 (MQ=255)
                                                                                                                 cgcAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGaa                      >  2:4481183/1‑140 (MQ=255)
                                                                                                                 cgcAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGGTTATTGACGGTATAAACCAGaa                      >  2:7561113/1‑140 (MQ=255)
                                                                                                                 cgcAGCCTGACATTCCGGTGAAAACTATTGGGCCGTAATGTTCGGACCAATCACGTCAATCGCATCGGGACAGATGCAATCCACACCCCAGCGCAGCTACTCTGCTGCGCGCTGGGGTGTATTGACGGTCTAAACCAGac                      >  1:924734/1‑139 (MQ=255)
                                                                                                                   cAGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGAATAAACCAGAATc                    <  1:9110170/140‑1 (MQ=255)
                                                                                                                    aGCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATcc                   >  1:6451873/1‑140 (MQ=255)
                                                                                                                     gCCTGACATTCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAAGCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGACTCCg                  <  2:6733350/140‑1 (MQ=255)
                                                                                                                              tCCGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGc         <  1:342144/140‑1 (MQ=255)
                                                                                                                               ccGTTGAACACTATTGGGCCGGAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCCGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCg        <  2:6033794/140‑1 (MQ=255)
                                                                                                                               ccGTTGAAAACTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCATCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCCGTCCGGCg        >  1:6857021/1‑140 (MQ=255)
                                                                                                                                         |                                                                                                                                       
CAACACCAACGGCGGGATGTTAAACAGCAACCGTAATCCGGATAGTTCGTTGAATCAGCAGCATATGCTGCCGGAGAGGAGAAACGGCGACATGCTGAATCAGCCCAGCACGCCGCAGCCTGACATTCCGTTGAAAATTATTGGGCCGTAAAGTTCGGACCAATCACGTCAATCGCATCGGTACAGATGCAATCCACACCCCAGCGCAGCAACTCTGCTGCGCGCTGGGGTTTATTGACGGTATAAACCAGAATCCGCAGTCCGGCGTCTTTC  >  NZ_CP025268/3587920‑3588192

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: