BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,684,318	T→C	663 (TAA→TAG)	hmsP ←	biofilm formation regulator HmsP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,684,318	0	T	C	100.0%	1513.5 / NA	436	663 (TAA→TAG)	hmsP	biofilm formation regulator HmsP
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (255/181); total (255/181)

Only 100 of 436 total aligned reads displayed.

ACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGTTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGCTTCAGTCTCCACGCCTTCGGCAATCA  >  NZ_CP025268/3684181‑3684454

aCCTGCGGCCTTAAAATTACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAATAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATAAGTTTGGGGTAGCTa                                                                                                                                        >  2:888249/1‑140 (MQ=255)

aCCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTa                                                                                                                                        >  2:3656632/1‑140 (MQ=255)

 ccTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACACAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTATTTAAAGTTTTGTAATCAGTTTGGGGTAGCTAc                                                                                                                                       >  2:229552/1‑140 (MQ=255)

 ccTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTaa                                                                                                                                       >  2:9110868/1‑139 (MQ=255)

 ccTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTAc                                                                                                                                       >  1:3150232/1‑140 (MQ=255)

 ccTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTAc                                                                                                                                       >  1:5434268/1‑140 (MQ=255)

 ccTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTAc                                                                                                                                       >  2:3186318/1‑140 (MQ=255)

 ccTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACGTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTAc                                                                                                                                       >  1:5650089/1‑140 (MQ=255)

    gCGGCCTTAAAATAACACCAAGAAAACATAACATAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGTCTAGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTTGGGTAGCTACttt                                                                                                                                    >  2:540151/1‑140 (MQ=255)

       gCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTttct                                                                                                                                 >  1:8125209/1‑140 (MQ=255)

       gCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTttct                                                                                                                                 >  1:6227361/1‑140 (MQ=255)

       gCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTttct                                                                                                                                 >  1:6583586/1‑140 (MQ=255)

         cTTAAAATTACACCCAGACAAAATCACAGAAATGTACATGGATCATAATTGAAACAAAATTGTTTAATAGTTTGAGCTGGCTCGGACAAAGCAGCACTTTGTATAGTTTTGTAATCAGTTTGGGGTAGCTACTTttcttc                                                                                                                               >  2:1453171/1‑140 (MQ=255)

           tAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCa                                                                                                                             >  2:7461200/1‑140 (MQ=255)

                 aaCACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGACACAAAAAGGTTAACAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAAc                                                                                                                       <  1:8024826/140‑1 (MQ=255)

                 aaCACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAAc                                                                                                                       <  2:9326383/140‑1 (MQ=255)

                  acacCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCCGTTTGGGGTAGCTACTTTTCTTCCAGGTAAct                                                                                                                      >  1:8668392/1‑140 (MQ=255)

                  acacCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAAct                                                                                                                      >  2:625356/1‑140 (MQ=255)

                  acacCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTCAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAAct                                                                                                                      <  2:6636054/140‑1 (MQ=255)

                        aGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTc                                                                                                                >  1:1828726/1‑140 (MQ=255)

                        aGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTc                                                                                                                >  1:4006928/1‑140 (MQ=255)

                        aGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTATGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATGAGTGTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTc                                                                                                                >  2:5123098/1‑140 (MQ=255)

                          acaacaTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGa                                                                                                              >  1:5831856/1‑140 (MQ=255)

                             acaTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGa                                                                                                           <  1:9257959/140‑1 (MQ=255)

                             acaTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGa                                                                                                           <  1:7442413/140‑1 (MQ=255)

                             acaTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTGTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGa                                                                                                           <  2:2970836/140‑1 (MQ=255)

                              caTCACAGATATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGAt                                                                                                          >  1:6985341/1‑140 (MQ=255)

                              caTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGAt                                                                                                          >  2:3103982/1‑140 (MQ=255)

                               aTCACAGCAATTTACCTGGATCATAATTGAAACAAAAAGGTGAAAAAGTTTGATCTGGCTCGCACAAACCAGCAATTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCTAAGAtt                                                                                                         <  2:2452018/140‑1 (MQ=255)

                               aTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGAtt                                                                                                         <  1:1429148/140‑1 (MQ=255)

                               aTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGAtt                                                                                                         <  1:2032755/140‑1 (MQ=255)

                               aTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGAtt                                                                                                         <  2:6809172/140‑1 (MQ=255)

                               aTCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGAtt                                                                                                         <  1:5015144/140‑1 (MQ=255)

                                   caGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCaa                                                                                                     <  2:4063367/140‑1 (MQ=255)

                                   caGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCaa                                                                                                     >  1:2469362/1‑140 (MQ=255)

                                   caGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCaa                                                                                                     <  2:4820288/140‑1 (MQ=255)

                                      aaaTGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAg                                                                                                  >  1:286645/1‑140 (MQ=255)

                                      aaaTGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAg                                                                                                  >  2:2679585/1‑140 (MQ=255)

                                        aTGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAggg                                                                                                <  2:2165997/140‑1 (MQ=255)

                                         tGTACCTGGATCATAATTGAAACAAATAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAATGTTTTGGAATCAGGTTGGGGTAGCTACTTTTCTTCCTGGTAACTCTCTTAGAAGATTTCTATAgggg                                                                                               >  2:8152073/1‑139 (MQ=255)

                                         tGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTTGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGa                                                                                               <  2:2408235/140‑1 (MQ=255)

                                         tGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTACCTCTCTTCGAAGAGTTCAATAGGGa                                                                                               >  1:842384/1‑140 (MQ=255)

                                         tGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGa                                                                                               >  1:7811033/1‑140 (MQ=255)

                                         tGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGa                                                                                               >  2:8444615/1‑140 (MQ=255)

                                           tACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGt                                                                                             >  1:5300965/1‑140 (MQ=255)

                                           tACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGt                                                                                             >  1:2302553/1‑140 (MQ=255)

                                              cTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTggg                                                                                          >  1:1153129/1‑140 (MQ=255)

                                                ggATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTttctt                                                                                                                                <  1:7621978/100‑1 (MQ=255)

                                                ggATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCg                                                                                        >  2:5104080/1‑140 (MQ=255)

                                                ggATCATAATTGAAAAAAAAAGGTTAAAAAGTTAGAGCTGGCTCGCACAAACCAGAACTTTTTAAAGTTTTGTAATAAGTGAGGGGTCGCTACTGTTCTTCCAGGTAACTCTCTTCGAAGAGTTCAATAGGGAGTGGGCg                                                                                        >  2:7635440/1‑140 (MQ=255)

                                                  aTCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAg                                                                                      >  2:6087047/1‑140 (MQ=255)

                                                  aTCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAg                                                                                      >  2:1009576/1‑140 (MQ=255)

                                                  aTCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCAACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAg                                                                                      >  2:1786597/1‑140 (MQ=255)

                                                   tCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGc                                                                                     >  1:7191646/1‑140 (MQ=255)

                                                     aTAATTGAAACAAATAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaa                                                                                   >  2:3554922/1‑140 (MQ=255)

                                                     aTAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaa                                                                                   >  1:4608284/1‑140 (MQ=255)

                                                      tAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaaa                                                                                  >  1:9021600/1‑140 (MQ=255)

                                                      tAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaaa                                                                                  >  1:3708563/1‑140 (MQ=255)

                                                       aaTTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaaaa                                                                                 >  1:2261198/1‑140 (MQ=255)

                                                       aaTTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCaaaa                                                                                 >  2:8775375/1‑140 (MQ=255)

                                                          tGAAACAAAAATGTTAAAAATTTAGAGCTGGCTCGAACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTACTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAgg                                                                              <  2:5632671/140‑1 (MQ=255)

                                                          tGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAgg                                                                              <  2:6227361/140‑1 (MQ=255)

                                                          tGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAgg                                                                              <  1:9542755/140‑1 (MQ=255)

                                                            aaaCAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGaa                                                                            >  1:4816408/1‑140 (MQ=255)

                                                            aaaCAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGaa                                                                            >  2:4173686/1‑140 (MQ=255)

                                                              aCAAAAAGGTTAAATAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCACTTTGGGGAAGCTACTTTTCTTCAAGGTAACTCTCTTCGAAGATTTCAATATGGAGAGGTCGAGCACAAAGGAAGc                                                                          >  2:7961995/1‑140 (MQ=255)

                                                              aCAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGc                                                                          >  1:3507243/1‑140 (MQ=255)

                                                               cAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGcc                                                                         <  1:6489150/140‑1 (MQ=255)

                                                               cAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGcc                                                                         <  1:6725327/140‑1 (MQ=255)

                                                               cAAAAAGGTTAAAAAGATTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGcc                                                                         <  1:1585886/140‑1 (MQ=255)

                                                                  aaaGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTg                                                                      <  1:3580754/140‑1 (MQ=255)

                                                                          aaaaGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAAGAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATAc                                                              >  2:7562905/1‑140 (MQ=255)

                                                                          aaaaGTTTGAGCTGGCTCGCACAAACCAGCACTTTGTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATAc                                                              >  2:6665598/1‑140 (MQ=255)

                                                                                    gcgggCTCGCACAAACCAGCACTTTTTAACGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCCATCGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGc                                                    <  1:7382623/137‑1 (MQ=255)

                                                                                         cTCGCACAAACCAGCACTTTGTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTg                                               >  2:3996579/1‑140 (MQ=255)

                                                                                            gCACAAACCATCACTTTTTAAATTTTTGTAATCAGTTTGGGGTATCTACTTTTCTTCCAGGTAAATCTCTTCGATGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTgcca                                            <  1:4269743/140‑1 (MQ=255)

                                                                                             cacaAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTgccag                                           >  1:6893241/1‑140 (MQ=255)

                                                                                             cacaAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTgccag                                           >  1:6279176/1‑140 (MQ=255)

                                                                                             cacaAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTgccag                                           >  1:1913747/1‑140 (MQ=255)

                                                                                              acaAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAACAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTgccagc                                          <  1:7511556/140‑1 (MQ=255)

                                                                                              acaAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTgccagc                                          <  1:3014567/140‑1 (MQ=255)

                                                                                              acaAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTgccagc                                          <  1:3196907/140‑1 (MQ=255)

                                                                                                 aaCCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAAGAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGccagccag                                       <  2:5559853/140‑1 (MQ=255)

                                                                                                  aCCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGt                                      >  2:2886013/1‑140 (MQ=255)

                                                                                                  aCCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGt                                      <  2:6575566/140‑1 (MQ=255)

                                                                                                  aCCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGt                                      >  1:789033/1‑140 (MQ=255)

                                                                                                    cAGCACTTTTTAAAGTTTTGTAATCAGTGTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTcg                                    <  1:8279247/140‑1 (MQ=255)

                                                                                                      gCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTcgcg                                  >  2:6361686/1‑140 (MQ=255)

                                                                                                      gCACTTTTTAAAGATTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTcgcg                                  <  1:9411987/140‑1 (MQ=255)

                                                                                                        aCTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGtt                                <  1:446126/140‑1 (MQ=255)

                                                                                                            tttAAAGTTTTGTAATCAGTTTGGGGTCGCTACTTTTCTTCCCGGTAACTCTCGTCGAAGATTTCAAGAGGGAGTGGGCGTGCACAAAGGAAGCCCTGGGCAATAGCAAGGCCCGCTTTTGACAGCCAGTCGCGTTGTGc                            >  2:3285744/1‑140 (MQ=255)

                                                                                                            tttAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGc                            >  2:784739/1‑140 (MQ=255)

                                                                                                            tttAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGc                            >  1:8915010/1‑140 (MQ=255)

                                                                                                              tAAAGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGCtt                          <  2:4888386/140‑1 (MQ=255)

                                                                                                               aaaGTTTTGTAATCAGATTGGGGTAGCTACTTTTCTTCCCGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGCTTc                         <  1:5295633/140‑1 (MQ=255)

                                                                                                                aaGTTTTGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGCTTCa                        <  2:7331478/140‑1 (MQ=255)

                                                                                                                    tttGTAATCAGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGCTTCAGtct                    >  1:6052343/1‑140 (MQ=255)

                                                                                                                             aGTTTGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGCTTCAGTCTCCACGCCtt           <  1:2914469/140‑1 (MQ=255)

                                                                                                                                ttGGGGTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGCTTCAGTCTCCACGCCTTCgg        <  2:1309344/140‑1 (MQ=255)

                                                                                                                                   gggTAGCTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGCTTCAGTCTCCACGCCTTCGGCaa     <  2:3836857/140‑1 (MQ=255)

ACCTGCGGCCTTAAAATAACACCCAGACAACATCACAGAAATGTACCTGGATCATAATTGAAACAAAAAGGTTAAAAAGTTTGAGCTGGCTCGCACAAACCAGCACTTTTTAAAGTTTTGTAATCAGTTTGGGGTAGTTACTTTTCTTCCAGGTAACTCTCTTCGAAGATTTCAATAGGGAGTGGGCGAGCAAAAAGGAAGCCCTGGGCAATACCAACGCCCGCTTTTGCCAGCCAGTCGCGTTGTGCTTCAGTCTCCACGCCTTCGGCAATCA  >  NZ_CP025268/3684181‑3684454

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`