BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	3,943,931	A→G	noncoding (205/1542 nt)	CXP41_RS20515 →	16S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	3,943,931	0	A	G	99.7%	1316.4 / ‑3.6	577	noncoding (205/1542 nt)	CXP41_RS20515	16S ribosomal RNA
Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (270/305); total (271/306)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.78e-01

Only 100 of 584 total aligned reads displayed.

ACAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTC  >  NZ_CP025268/3943798‑3944067

aCAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCg                                                                                                                                    >  1:1264092/1‑140 (MQ=17)

        cAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCtt                                                                                                                            >  2:5237217/1‑140 (MQ=17)

        cAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCtt                                                                                                                            >  1:798210/1‑140 (MQ=17)

                  tttCGCTGTCGAGTGGCGGACGGGTGAGTACTGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAAGACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGAt                                                                                                                  <  1:2863788/140‑1 (MQ=255)

                  tttCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGTGAAACTGACTGATGGAGGGGGATAACTACTGTAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGAt                                                                                                                  <  2:1940794/140‑1 (MQ=255)

                   ttCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGAtg                                                                                                                 >  2:7094259/1‑140 (MQ=21)

                   ttCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGAtg                                                                                                                 >  1:7331916/1‑140 (MQ=21)

                       cTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATCACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGcc                                                                                                             <  1:5103402/140‑1 (MQ=17)

                          aCGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAg                                                                                                          >  1:2102443/1‑140 (MQ=17)

                           cGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGa                                                                                                         <  2:8310937/140‑1 (MQ=17)

                           cGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGa                                                                                                         <  1:7706200/140‑1 (MQ=17)

                                ggCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGa                                                                                                    <  1:6724361/140‑1 (MQ=17)

                                 gCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGAt                                                                                                   <  2:885689/140‑1 (MQ=17)

                                  cGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGAtt                                                                                                  <  2:1145798/140‑1 (MQ=17)

                                  cGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGAtt                                                                                                  >  2:4825188/1‑140 (MQ=17)

                                    gACGGGTGAGTACTGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGCTTAg                                                                                                >  2:5822645/1‑140 (MQ=12)

                                      cGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCt                                                                                              <  2:7186164/140‑1 (MQ=17)

                                      cGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAAGACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCt                                                                                              <  2:6728318/140‑1 (MQ=17)

                                         gTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCtagt                                                                                           <  1:9378762/140‑1 (MQ=17)

                                            aGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAgg                                                                                        <  1:1033583/140‑1 (MQ=17)

                                             gTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGt                                                                                       <  2:2690929/140‑1 (MQ=17)

                                                   tCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTa                                                                                 <  1:7782255/140‑1 (MQ=17)

                                                   tCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTa                                                                                 >  1:8353117/1‑140 (MQ=17)

                                                   tCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTa                                                                                 >  1:697881/1‑140 (MQ=17)

                                                   tCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTa                                                                                 >  2:1268642/1‑140 (MQ=17)

                                                   tCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAAGACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTa                                                                                 <  1:4865761/140‑1 (MQ=17)

                                                    cTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTaa                                                                                <  1:8198100/140‑1 (MQ=17)

                                                      gggAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACg                                                                              >  2:2469131/1‑140 (MQ=17)

                                                        gAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGc                                                                            <  2:7970243/140‑1 (MQ=17)

                                                         aaaCTGCCTGATGGAGGGGGATCACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCACAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCt                                                                           <  2:9332367/140‑1 (MQ=12)

                                                         aaaCTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCt                                                                           <  2:1596166/140‑1 (MQ=17)

                                                         aaaCTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCt                                                                           <  2:8084197/140‑1 (MQ=17)

                                                          aaCTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTc                                                                          <  2:3365062/140‑1 (MQ=17)

                                                               ccTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTa                                                                     >  2:4279294/1‑140 (MQ=17)

                                                                    tGGAGGGGGATCACTACTGGAAACGGTAGCTCAGACCGCAGAACGGCGCAAGACCAACGCGGGGGGCCTTCGGGCCTCGGGCCATCAGATGTGCCCAGATGGGCTTAGCTAGGAGGTGGGGGAACGGCTCACCGAGGcga                                                                <  2:6265484/140‑1 (MQ=255)

                                                                    tGGAGGGGGATAACTACTGGACACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGcga                                                                <  1:4230991/140‑1 (MQ=17)

                                                                    tGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGcga                                                                <  2:4691301/140‑1 (MQ=17)

                                                                     ggAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGCGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGcgac                                                               <  1:3757205/140‑1 (MQ=17)

                                                                         ggggATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCACAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATc                                                           <  1:2208732/140‑1 (MQ=17)

                                                                         ggggATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATc                                                           >  2:2220759/1‑140 (MQ=17)

                                                                         ggggATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATc                                                           >  1:3327805/1‑140 (MQ=17)

                                                                           ggAGAACTCCAGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATccc                                                         <  1:6531241/140‑1 (MQ=255)

                                                                              tAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAg                                                      >  2:4479898/1‑140 (MQ=17)

                                                                              tAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAg                                                      >  2:6004223/1‑140 (MQ=17)

                                                                               aaCTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGc                                                     <  1:2296829/140‑1 (MQ=17)

                                                                               aaCTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGc                                                     <  1:4436834/140‑1 (MQ=17)

                                                                                actcctGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCt                                                    <  1:2745212/140‑1 (MQ=17)

                                                                                actactGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCt                                                    <  1:5502987/140‑1 (MQ=17)

                                                                                 ctactGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTg                                                   <  2:6886963/140‑1 (MQ=17)

                                                                                    ctGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGCGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGCTGAGCTAGTAGGGGGGGTAACGGCTCTCCTAGGCGACGATCCCTAGCTGGTc                                                >  2:7318389/1‑140 (MQ=11)

                                                                                     tGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTcg                                               >  1:7587271/1‑139 (MQ=17)

                                                                                     tGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGACATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCt                                               >  1:8788425/1‑140 (MQ=17)

                                                                                      ggAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTg                                              >  1:576199/1‑140 (MQ=17)

                                                                                       gAAACGGTAGCTAATACCGCATAACGTCGCAATACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTga                                             >  1:3494949/1‑140 (MQ=17)

                                                                                         aaCGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTgaga                                           >  1:5283981/1‑140 (MQ=17)

                                                                                            ggTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGa                                        >  1:2498420/1‑140 (MQ=17)

                                                                                            ggTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGa                                        >  2:1109033/1‑140 (MQ=17)

                                                                                            ggTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGAGTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGa                                        >  1:9078610/1‑140 (MQ=17)

                                                                                              tAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATg                                      >  1:4012497/1‑140 (MQ=17)

                                                                                                gCTAATACCGCATAACGTCGCAAGACCACAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGAc                                    <  2:8635870/140‑1 (MQ=17)

                                                                                                   aaTACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTg                                                   >  1:9524886/1‑122 (MQ=17)

                                                                                                   aaTACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAg                                 <  2:3803364/140‑1 (MQ=17)

                                                                                                    aTACCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGc                                <  2:5439821/140‑1 (MQ=17)

                                                                                                      aCCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCt                                                                           >  2:3195020/1‑95 (MQ=18)

                                                                                                      aCCGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCca                              >  1:8452318/1‑140 (MQ=17)

                                                                                                        cGCATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTCGGTGGGGTAACGGCTCACCTAGTCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCcaca                            >  2:299987/1‑140 (MQ=12)

                                                                                                          cATAACGTCGCAAGACCAGAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                          >  1:180970/1‑140 (MQ=17)

                                                                                                          cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCGGATGGGCTTAGCTAGTAGGTGGGGGAAATGCTCACCAAGGCGACGATCCCTAGCTGGTCTGAGAGGATGTCCAGCCACACt                          >  1:6247294/1‑140 (MQ=11)

                                                                                                          cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGCTGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCcacccg                          >  2:7716700/1‑137 (MQ=12)

                                                                                                          cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGCTTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                          >  2:6071312/1‑140 (MQ=17)

                                                                                                          cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTGTGAGAGGAGGACCAGCCACACt                          >  1:9196460/1‑140 (MQ=12)

                                                                                                          cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                          <  2:5713543/140‑1 (MQ=17)

                                                                                                          cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                          >  2:7587265/1‑140 (MQ=17)

                                                                                                          cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                          >  2:2107264/1‑140 (MQ=17)

                                                                                                          cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                          >  2:5098911/1‑140 (MQ=17)

                                                                                                          cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                          >  2:1410693/1‑140 (MQ=17)

                                                                                                          cATAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGGAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACt                          >  1:6836477/1‑140 (MQ=17)

                                                                                                           aTAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTg                         <  2:9205016/140‑1 (MQ=17)

                                                                                                            tAACGTCGCCAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTgg                        <  1:3220438/140‑1 (MQ=17)

                                                                                                            tAACGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTgg                        <  1:4733953/140‑1 (MQ=17)

                                                                                                              aCGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGaa                      >  1:1483940/1‑140 (MQ=17)

                                                                                                               cGTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAAc                     >  2:3646286/1‑140 (MQ=17)

                                                                                                                gTCGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACt                    >  1:7434315/1‑140 (MQ=17)

                                                                                                                  cGCAAGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTga                  >  2:1767668/1‑140 (MQ=17)

                                                                                                                      aGACCACAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGCTGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGaca              <  1:8888210/140‑1 (MQ=12)

                                                                                                                      aGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGaca              <  1:3589878/140‑1 (MQ=17)

                                                                                                                      aGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGaca              <  1:4393648/140‑1 (MQ=17)

                                                                                                                      aGACCAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGaca              <  1:2615485/140‑1 (MQ=17)

                                                                                                                         ccAAAGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACgg           >  2:259136/1‑140 (MQ=17)

                                                                                                                            aaGAGGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTcc        <  2:4076043/140‑1 (MQ=17)

                                                                                                                             cgagGGGGGCCTTCGGGCCTCGTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCa       <  1:6018427/139‑1 (MQ=12)

                                                                                                                             agcggggggCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCa       <  1:1678262/137‑1 (MQ=17)

                                                                                                                               agGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGa     <  2:6425695/140‑1 (MQ=17)

                                                                                                                               agGGGGGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGa     <  2:1537845/140‑1 (MQ=17)

                                                                                                                                 ggggGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACt   >  1:3114860/1‑140 (MQ=17)

                                                                                                                                 ggggGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACt   >  2:7419003/1‑140 (MQ=17)

                                                                                                                                 ggggGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACt   >  2:3439139/1‑140 (MQ=17)

                                                                                                                                 ggggGCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCAAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACt   >  2:6662601/1‑140 (MQ=17)

                                                                                                                                  ggggCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTc  >  2:5917650/1‑140 (MQ=17)

                                                                                                                                  ggggCCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGGGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTc  >  2:7815855/1‑140 (MQ=17)

ACAGGAAACAGCTTGCTGTTTCGCTGACGAGTGGCGGACGGGTGAGTAATGTCTGGGAAACTGCCTGATGGAGGGGGATAACTACTGGAAACGGTAGCTAATACCGCATAACGTCGCAAGACCAAAGAGGGGGACCTTCGGGCCTCTTGCCATCAGATGTGCCCAGATGGGATTAGCTAGTAGGTGGGGTAACGGCTCACCTAGGCGACGATCCCTAGCTGGTCTGAGAGGATGACCAGCCACACTGGAACTGAGACACGGTCCAGACTC  >  NZ_CP025268/3943798‑3944067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`