BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	4,501,975	T→C	pseudogene (714/1181 nt)	CXP41_RS23290 ←	phosphoethanolamine transferase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	4,501,975	0	T	C	100.0%	2021.0 / NA	576	pseudogene (714/1181 nt)	CXP41_RS23290	phosphoethanolamine transferase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (316/260); total (316/260)

Only 100 of 589 total aligned reads displayed.

GAAATGACGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGTTAGGAGTTAAGGCTGTTACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGGAAGCGAAGCTGCCTTTCTTGAGG  >  NZ_CP025268/4501838‑4502111

 aaaTGACGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTcaca                                                                                                                                       <  2:1938548/140‑1 (MQ=255)

  caTGACGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGGTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCacac                                                                                                                                      <  1:5718588/139‑1 (MQ=255)

  aaTGCCGTGGGGTCCGGGGTAGGATACCCTCAATCCGGGCCAGGAAGGTATCCAGGTTTCTGTTGGGGGGGTGGTTACAGGCAATTTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTcaca                                                                                                                                       <  1:90002/140‑1 (MQ=255)

  aaTGACGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGTGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCacac                                                                                                                                      <  2:4244860/140‑1 (MQ=255)

  aaTGACGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCacac                                                                                                                                      <  1:4219764/140‑1 (MQ=255)

  aaTGACGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCacac                                                                                                                                      <  2:5584701/140‑1 (MQ=255)

   aTGACGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGAGGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACg                                                                                                                                     >  1:2794518/1‑140 (MQ=255)

    tGACGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACgg                                                                                                                                    >  2:777366/1‑140 (MQ=255)

       cGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGAtt                                                                                                                                 <  2:4507177/140‑1 (MQ=255)

       cGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGCTAAGGCTGTCACACGGAtt                                                                                                                                 >  2:9359791/1‑140 (MQ=255)

            gTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGAt                                                                                                                            <  2:899285/140‑1 (MQ=255)

                cGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATgaga                                                                                                                        >  1:7894888/1‑140 (MQ=255)

                  gCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAAc                                                                                                                      <  2:1651947/140‑1 (MQ=255)

                     aaGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCca                                                                                                                   >  1:2342505/1‑140 (MQ=255)

                     aaGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCca                                                                                                                   >  1:3517849/1‑140 (MQ=255)

                     aaGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCca                                                                                                                   >  2:2046728/1‑140 (MQ=255)

                      cggATACCATCAAGCTGGCCAAGAAAGTTATCCAGTGTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGAGACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACTCGGATTTGGATGAGTACCcat                                                                                                                  >  2:833299/2‑140 (MQ=255)

                       ggATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCcatc                                                                                                                 <  2:6474613/140‑1 (MQ=255)

                       ggATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCcatc                                                                                                                 <  1:8160035/140‑1 (MQ=255)

                          tACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtg                                                                                                              >  2:2204355/1‑140 (MQ=255)

                            ccATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCAtgtg                                                                                                            <  2:2552275/140‑1 (MQ=255)

                              aTCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCa                                                                                                          <  2:7196574/140‑1 (MQ=255)

                               tCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAg                                                                                                         >  1:9069970/1‑140 (MQ=255)

                               tCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAg                                                                                                         >  2:8643921/1‑140 (MQ=255)

                                  aGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGaa                                                                                                      >  2:4744744/1‑140 (MQ=255)

                                  aGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGaa                                                                                                      >  1:3925395/1‑140 (MQ=255)

                                  aGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGaa                                                                                                      >  1:3133056/1‑140 (MQ=255)

                                  aGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGaa                                                                                                      >  1:2550775/1‑140 (MQ=255)

                                  aGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑ATTTTCGGGGATACTGCTCCAGTTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGaa                                                                                                      >  2:7502243/1‑140 (MQ=255)

                                  aGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCAGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGaa                                                                                                      >  1:619968/1‑140 (MQ=255)

                                      ggCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGAGGAGAACCCATCATGTGCAGGAAAAtt                                                                                                  >  1:7745380/1‑140 (MQ=255)

                                       gCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTa                                                                                                 >  1:5030615/1‑140 (MQ=255)

                                       gCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGAGGAGAACCCATCATGTGCCGGACAAGTa                                                                                                 >  2:7623620/1‑140 (MQ=255)

                                        ccAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTAt                                                                                                >  1:6987739/1‑140 (MQ=255)

                                           aGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGTATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCtt                                                                                             <  2:4696110/140‑1 (MQ=255)

                                              aaGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCgg                                                                                          <  2:9179829/140‑1 (MQ=255)

                                                 ttATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGgaga                                                                                       <  1:1085202/140‑1 (MQ=255)

                                                    tCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGa                                                                                    >  2:6399106/1‑140 (MQ=255)

                                                    tCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTACGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATATGAAGGAAAATTATCTTCGGAGAGGa                                                                                    >  2:1323569/1‑140 (MQ=255)

                                                         tttACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTAt                                                                               >  1:4670036/1‑140 (MQ=255)

                                                         tttACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTAt                                                                               >  1:6380846/1‑140 (MQ=255)

                                                         tttACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTAt                                                                               >  1:5984666/1‑140 (MQ=255)

                                                              tGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGcc                                                                          >  2:3729506/1‑140 (MQ=255)

                                                              tGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGcc                                                                          <  1:2108993/140‑1 (MQ=255)

                                                                aTGCTGGCGAGGTAACAGGCAA‑TTGTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTGTGATGAGAACCCATCATGTGCAGGAAAACTATCTACGGAGAGGATGTATCCGCCAg                                                                        <  2:5405388/140‑1 (MQ=255)

                                                                 tGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGAGACTGCTCCAGGTAATTAATCGGCTAGGAGTTAAGGCTGTCACACGGATTGGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAgc                                                                       <  2:3388147/140‑1 (MQ=255)

                                                                   cTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAgcgc                                                                     <  2:5240949/140‑1 (MQ=255)

                                                                   cTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAgcgc                                                                     >  1:4907527/1‑140 (MQ=255)

                                                                    tGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCa                                                                    <  1:5871277/140‑1 (MQ=255)

                                                                       cGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGt                                                                 >  2:2825184/1‑140 (MQ=255)

                                                                       cGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGt                                                                 >  2:6105226/1‑140 (MQ=255)

                                                                       cGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGt                                                                 <  2:4091612/140‑1 (MQ=255)

                                                                       cGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGt                                                                 >  2:7931410/1‑140 (MQ=255)

                                                                        gAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGtt                                                                <  1:8515238/140‑1 (MQ=255)

                                                                         aGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTc                                                               <  1:6105226/140‑1 (MQ=255)

                                                                          ggTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCt                                                              <  1:8362530/140‑1 (MQ=255)

                                                                          ggTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCt                                                              >  2:3045560/1‑140 (MQ=255)

                                                                           gTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTg                                                             <  1:7057291/140‑1 (MQ=255)

                                                                           gTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTg                                                             >  1:1923669/1‑140 (MQ=255)

                                                                            tAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGt                                                            <  2:8166614/140‑1 (MQ=255)

                                                                             aaCAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGtt                                                           >  1:5236329/1‑140 (MQ=255)

                                                                                aGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTCTCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTcc                                                        <  1:1666106/140‑1 (MQ=255)

                                                                                aGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTcc                                                        >  2:581295/1‑140 (MQ=255)

                                                                                 ggCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCt                                                       <  1:4171263/140‑1 (MQ=255)

                                                                                 ggCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCt                                                       <  1:7183376/140‑1 (MQ=255)

                                                                                 ggCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCt                                                       <  1:6593095/140‑1 (MQ=255)

                                                                                    aa‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTa                                                    >  1:5648324/1‑140 (MQ=255)

                                                                                     a‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTaa                                                   <  1:1477695/140‑1 (MQ=255)

                                                                                                  tACTGCTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTc                                       >  1:7274547/1‑140 (MQ=255)

                                                                                                       cTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTg                                  >  2:5147802/1‑140 (MQ=255)

                                                                                                       cTCCAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGACAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTg                                  >  1:5510168/1‑140 (MQ=255)

                                                                                                       atCCAGGTAATTATTCGGCTAGGAGTAAAGGCTGTCACACGGATTTGGATGAGAACCCAACATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGACATCTg                                  >  2:1757438/2‑140 (MQ=255)

                                                                                                         ccAGGTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGtt                                >  1:1537572/1‑140 (MQ=255)

                                                                                                            ggTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTa                             >  2:7000612/1‑140 (MQ=255)

                                                                                                            ggTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTa                             >  1:9431259/1‑140 (MQ=255)

                                                                                                            ggTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTa                             >  2:1141271/1‑140 (MQ=255)

                                                                                                            ggTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTa                             >  1:7378901/1‑140 (MQ=255)

                                                                                                            ggTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTa                             >  1:3675974/1‑140 (MQ=255)

                                                                                                            ggTAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTa                             >  1:4380950/1‑140 (MQ=255)

                                                                                                              tAATTATTCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACg                           <  1:1382838/140‑1 (MQ=255)

                                                                                                               aaTTATTCGGCTAGGAGGTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGTAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACgg                          >  2:3950176/1‑140 (MQ=255)

                                                                                                                 ttattCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGga                        >  1:106397/1‑140 (MQ=255)

                                                                                                                 ttattCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGga                        >  1:302004/1‑140 (MQ=255)

                                                                                                                 ttattCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGga                        >  2:5693607/1‑140 (MQ=255)

                                                                                                                  tattCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGgaa                       >  2:6759514/1‑140 (MQ=255)

                                                                                                                    ttCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGgaagc                     >  1:1266460/1‑140 (MQ=255)

                                                                                                                    ttCGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGgaagc                     >  1:2612681/1‑140 (MQ=255)

                                                                                                                      cGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGgaagcga                   >  1:6844583/1‑140 (MQ=255)

                                                                                                                      cGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGgaagcga                   >  2:8489102/1‑140 (MQ=255)

                                                                                                                      cGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGgaagcga                   >  2:7666074/1‑140 (MQ=255)

                                                                                                                      cGGCTAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGgaagcga                   >  2:6869131/1‑140 (MQ=255)

                                                                                                                       ggctAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTTTCATCTGTTTTACGGgaagcgaa                  <  2:1450946/137‑1 (MQ=255)

                                                                                                                       ggctAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGgaagcgaa                  >  2:4350336/4‑140 (MQ=255)

                                                                                                                         ctAGGAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGgaagcgaagc                <  1:8644830/139‑1 (MQ=255)

                                                                                                                            ggAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGGAAGCGAAGCTGc             >  2:2623136/1‑140 (MQ=255)

                                                                                                                            ggAGTTAAGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGGAAGCGAAGCTGc             >  2:273587/1‑140 (MQ=255)

                                                                                                                                  aaGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGGAAGCGAAGCTGCCTTTCt       >  1:4822712/1‑140 (MQ=255)

                                                                                                                                   aGGCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGGAAGCGAAGCTGCCTTTCtt      <  2:6660510/140‑1 (MQ=255)

                                                                                                                                    ggCTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGGAAGCGAAGCTGCCTTTCTTg     <  2:3156188/140‑1 (MQ=255)

                                                                                                                                      cTGTCACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGGAAGCGAAGCTGCCTTTCTTGAg   <  1:955656/140‑1 (MQ=255)

GAAATGACGTGAGTACCGGCGAAGGATACCATCAAGCTGGCCAAGAAAGTTATCCAGTTTACTGATGCTGGCGAGGTAACAGGCAA‑TTTTTCGGGGATACTGCTCCAGGTAATTATTCGGTTAGGAGTTAAGGCTGTTACACGGATTTGGATGAGAACCCATCATGTGCAGGAAAATTATCTTCGGAGAGGATGTATCCGCCAGCGCACGTTCTGTTTCCTGTAACAACAGTTTGTCATCTGTTTTACGGGAAGCGAAGCTGCCTTTCTTGAGG  >  NZ_CP025268/4501838‑4502111

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`