BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	4,608,154	G→A	noncoding (48/87 nt)	CXP41_RS23870 ←	tRNA‑Leu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	4,608,154	0	G	A	98.2%	1119.6 / ‑1.5	343	noncoding (48/87 nt)	CXP41_RS23870	tRNA‑Leu
Reads supporting (aligned to +/- strand): ref base G (5/1); new base A (169/161); total (177/166)
Fisher's exact test for biased strand distribution p-value = 2.16e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 344 total aligned reads displayed.

CCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGC  >  NZ_CP025268/4608018‑4608290

  ccACGTCCGTATGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACt                                                                                                                                     <  1:6306621/140‑1 (MQ=255)

  ccACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACt                                                                                                                                     <  1:5367451/140‑1 (MQ=255)

    aCGTCCGTTAGGACACTTACACCTGCAGCTAGCGCGTGTACCAATTCCGCCACCTTCGCACAGTCATCTTACTATTTTTGATCTCGCCTCGTTTGGGGCGAGGGGGGGGACTTGAACCCCCACGTCCGTTTGAACACTat                                                                                                                                   <  2:8132733/140‑2 (MQ=25)

    aCGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTaa                                                                                                                                   <  2:1625816/140‑1 (MQ=255)

    aCGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTATTGATATCGACTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTaa                                                                                                                                   >  2:7866043/1‑140 (MQ=255)

            aaGGACCCTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGCCTTGAACCACCACGTCCGTAAGAACACTAACACCTGaa                                                                                                                           >  2:2983828/1‑140 (MQ=255)

                acacTACCACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTa                                                                                                                       <  2:7411742/140‑1 (MQ=255)

                  acTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGACATCTTACTTTATTTGATATCGACTCGTTTGGTGCGAGGGGTGGGACTTGAACCACCACGTCCTTAAGAACACTACCACCTTAAGCTAgc                                                                                                                     >  1:6669821/1‑140 (MQ=37)

                  acTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGAAATAATACTTTATATGATATCGACTCGATTTGTGCGAGGGGGGGGAATTGAACCCCAACGTCATTAAGAACACAAACACCTGAAGCTAgc                                                                                                                     >  2:5183795/1‑140 (MQ=21)

                    tAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCTCAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAgcgc                                                                                                                   >  1:9156654/1‑140 (MQ=255)

                            gAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCCTCTTACTATTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCa                                                                                                           <  2:3481277/140‑1 (MQ=255)

                            gAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATATTACTTTTTTTGATATCGCCTCGTTTTGTGCGAGGGGGGGGACTTGAACCACCACGTCCGTAAGAACACTAACACCTGAAGCTAGAGCGTCTACCa                                                                                                           >  2:3796002/1‑140 (MQ=37)

                              agcgagcgCGTCTACCCATTCCGCCACCTTCGCACAGTCAGCTTACTTTTTGTGATATCGCCTCGTTGGGTGCGAGGGGGGGGACTTGAACCCCCTCGGCCGTAAGAACAGTAACACCTGGAGCGAGCGCGTCGACCact                                                                                                         >  2:9141807/1‑138 (MQ=25)

                              aGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAAt                                                                                                         >  2:7375875/1‑140 (MQ=255)

                              aGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAAt                                                                                                         >  2:7803581/1‑140 (MQ=255)

                                  aGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCAGCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCTCTTCCg                                                                                                     >  2:6206276/1‑140 (MQ=255)

                                   gcgcGTCTACCAATTCCGCCACCTTCGCACAGTCAACTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                                                    <  1:7731259/140‑1 (MQ=255)

                                   gcgcGACTACCAATTCCGCCACCTTCTCACATTCATCTTACTTTTTTTGATATCCCCTCGTTTGGTGCGAGGGGGGTGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGc                                                                                                    <  2:8579636/140‑1 (MQ=21)

                                    cgcgTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTaa                                                                                                                                   >  1:4193575/1‑108 (MQ=255)

                                       gTCGACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCAcc                                                                                                <  1:8078183/140‑1 (MQ=255)

                                        tCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCt                                                                                               >  1:3928730/1‑140 (MQ=255)

                                        gctcccAATTCCGCCACCTTCGCACAGTCATCTTACTGTTTTTGATATCGCCTGGGTTGGGGCGAGGGGGGGGCCTTGATCCGCGTCGTTCGTACGAACACTTACACCTGACGGTAGCGCGTCGTCCAGGTCCGGCAccg                                                                                               >  2:1387814/5‑139 (MQ=255)

                                         cTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCt                                                                                                                        <  2:7939581/114‑1 (MQ=255)

                                         cTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCt                                                                                                                        >  1:7939581/1‑114 (MQ=255)

                                            ccAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGc                                                                                           <  2:4024130/140‑1 (MQ=255)

                                             cAATTCCGCCACCTTCGCACATTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACCCCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  2:2560892/140‑1 (MQ=255)

                                             cAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGTTATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  2:1448457/140‑1 (MQ=255)

                                             cAATTCCGCCACCTTCGCACAGTCATCTTACATTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  2:6248501/140‑1 (MQ=255)

                                             cAATTCCGCCACCATCGCACAGTCATCTTACTTGTATTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  2:5302861/140‑1 (MQ=255)

                                             cAATTCCGCCAACTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGcc                                                                                          <  1:5169471/140‑1 (MQ=255)

                                              aaTTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGccc                                                                                         >  1:1404045/1‑140 (MQ=255)

                                                 tCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGt                                                                                      >  1:86609/1‑140 (MQ=255)

                                                 tCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGt                                                                                      <  1:4123615/140‑1 (MQ=255)

                                                  ccGCCACCTTCGCACTGTAATATTACTTTTTTTGATATCGCCTCTTTTGGTGCGAGGGGGGGGACTTGATCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTg                                                                                     <  1:7108262/140‑1 (MQ=18)

                                                  ccGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTg                                                                                     <  1:6026496/140‑1 (MQ=255)

                                                     ccACCTTCTCACAGTCATCTAACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGa                                                                                  <  1:5087840/140‑1 (MQ=255)

                                                     ccACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGa                                                                                  >  1:1073638/1‑140 (MQ=255)

                                                      gagcTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                 <  2:8551938/137‑1 (MQ=255)

                                                      cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                 <  1:1047413/140‑1 (MQ=255)

                                                      cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                 <  1:129540/140‑1 (MQ=255)

                                                      cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                 <  1:4549039/140‑1 (MQ=255)

                                                      cACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAg                                                                                 <  1:4627022/140‑1 (MQ=255)

                                                           tCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAata                                                                            >  1:2112165/1‑140 (MQ=255)

                                                                cattCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAAc                                                                       <  2:4132109/137‑1 (MQ=255)

                                                                caGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAAc                                                                       <  1:4432124/140‑1 (MQ=255)

                                                                   tCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTg                                                                    >  1:6154648/1‑140 (MQ=255)

                                                                   tCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTg                                                                    >  1:8826433/1‑140 (MQ=255)

                                                                   tCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGAGAGCACTATCAACGTg                                                                    >  2:8932241/1‑140 (MQ=255)

                                                                    cATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTgg                                                                   >  2:4670163/1‑140 (MQ=255)

                                                                    cATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACAATAACACCTGAAGCTAGCGCGTCTACCAATTCCGACACCTTCGCCCCGAGCGAGCACTATCAACGTgg                                                                   >  2:2305392/1‑140 (MQ=18)

                                                                     aTCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGATCACTATCAACGTGGt                                                                  >  2:1129132/1‑140 (MQ=255)

                                                                     aTCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGt                                                                  >  2:1203498/1‑140 (MQ=255)

                                                                      tCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCACAGCGAGCAATAACAACGTGGtt                                                                 >  2:475585/1‑140 (MQ=255)

                                                                        ttACTTTTTTTGATATCTACTCGTTTGGTGCGAGGGTGGGGACTTGAACCCCCACGTCCGTAAGAACAATAACACCTGAAGCTAGCGCGTCTACCAATTCCTCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGtttt                                                               <  1:8436715/140‑1 (MQ=21)

                                                                        ttACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGtttt                                                               >  1:8391083/1‑140 (MQ=255)

                                                                           cTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTgg                                                            >  1:203312/1‑140 (MQ=255)

                                                                               ttttGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCACTATCAAAGTGGTTATTGGTGCg                                                        >  2:3228213/1‑140 (MQ=18)

                                                                                tttGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGc                                                                                <  2:2458185/115‑1 (MQ=255)

                                                                                tttGAAATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGa                                                       <  1:187586/140‑1 (MQ=255)

                                                                                  tGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAgg                                                     <  1:5653715/140‑1 (MQ=255)

                                                                                     tatCGCCTCGTTTGGTGCGAGGGGGGGCACATGAACCCCCACGTCCGTAATAACACTACCACCTGAAGCTAGAGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATTTCAACGTGGTTTTTGGTGCGAggggg                                                  <  1:2899323/140‑1 (MQ=21)

                                                                                        cGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATCTCAACGTGGTTTTTGGTGCGAgggggggg                                               >  2:8770094/1‑140 (MQ=255)

                                                                                            tCGTTTGGTGCGAGGGGGGGGACTTGACCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACtt                                           <  1:1725498/140‑1 (MQ=255)

                                                                                                   gTGCGTGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGAAATATCAACGTGGTTTTTGGTGCGCGGGGGGGGACTTGAAcccc                                    <  1:356529/140‑1 (MQ=255)

                                                                                                   gTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTGTTTGGTGCGAGGGGGGGGACTTGAAcccc                                    >  1:9052256/1‑140 (MQ=255)

                                                                                                   ctGCGAGGGGGGGGACCTGAACCCCCCCGACCGACAGAACACTAACACCTGCAGCTAGCGCGTCTACCACGACCGCCACCAACGCCCAGTGCGAGAAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAAcccc                                    <  2:6775024/139‑1 (MQ=25)

                                                                                                     tcGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACAATAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCATTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCa                                  <  2:2396842/139‑1 (MQ=255)

                                                                                                      cGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCAATATCAAAGTGGGTGTTGGTGCGAGGGGGGGGACTCGAACCCCCAc                                 >  2:8302441/1‑140 (MQ=21)

                                                                                                        aGGGGGGGGACGTGAACACCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCGTCGCCCCGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACGTGAACCCCCACGt                               >  2:2798103/1‑140 (MQ=25)

                                                                                                          gggggggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGTTTTTGGTGCGAGGGGGGGGCCTTGAACCCCCACGTcc                             >  1:9490675/1‑140 (MQ=255)

                                                                                                             ggggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAATCTAGCGCGTCTACCACTTCCGCCACATTCGCCAAGTGCTAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTa                          <  2:4564023/140‑1 (MQ=25)

                                                                                                             ggggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAAGTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGGGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTa                          <  2:7236435/140‑1 (MQ=255)

                                                                                                              gggACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCAGAGAGCCAGAACTTACAAAGTGGTTCTTGCTGCGAGGGGGGGGACTTGAACACACACGTcctgta                         >  2:5581927/1‑136 (MQ=17)

                                                                                                              gggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTACGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTaa                         >  1:4382209/1‑140 (MQ=255)

                                                                                                               ggACTTGAACCCCCACGTCCGTAAGACCACTAACACCTGAAGCTAGCTCGTACACCTATTCCGCCACCTTCGCCCAGTGCGAGCAATATAAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAg                        <  1:7398396/140‑1 (MQ=25)

                                                                                                               ggACTTGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCTAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAg                        <  2:5918623/140‑1 (MQ=255)

                                                                                                                   ttGAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGaca                    >  1:5826848/1‑140 (MQ=255)

                                                                                                                     gcaCCCCCACGTCCGTAAGAACACTAACACATGAAGCTAGCGATTCTACCTTTTCCTACACCTTCGCCCAGTGCTAGCAATTTCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  <  2:8840087/138‑1 (MQ=25)

                                                                                                                     gAACCCCCACGTCCGTAAGACAACTAACACCTGAATCTAGCGCGTATACACATTCCCAAACCTTCGCCAAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  <  1:4022521/140‑1 (MQ=25)

                                                                                                                     gAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCTATTCCTCCACCTTCGCCCAGTGCGAGAAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  <  1:9532105/140‑1 (MQ=255)

                                                                                                                     gAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAGCGTGGTTGTTGGTGCGAGGGGGGGGCCTTGAACCCCCACGTCCGTAAGGACACt                  >  1:1955595/1‑140 (MQ=255)

                                                                                                                     gAACCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATACCGCCACCTTCGCCCAGTGCGAGCAATATCACCGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACt                  <  1:9006984/140‑1 (MQ=255)

                                                                                                                       aCCCCCACGTCCGTAAGACCACTAACACCTGAAGCTAGCGCGTCTACCATGTCCGCCACCTTCGCCCATTGCGAGCAATATCAACGGGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTaa                <  2:7543283/140‑1 (MQ=37)

                                                                                                                       aCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCATTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTaa                <  1:2398881/140‑1 (MQ=255)

                                                                                                                       aCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTaa                <  1:6826831/140‑1 (MQ=255)

                                                                                                                       aCCCCCACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACAACCACGTCCGTAAGGACACTaa                >  2:6920653/1‑140 (MQ=255)

                                                                                                                         ccccACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAaca              >  1:6408730/1‑140 (MQ=255)

                                                                                                                           ccACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACAcc            >  1:82296/1‑140 (MQ=255)

                                                                                                                           ccACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACAcc            >  1:1529802/1‑140 (MQ=255)

                                                                                                                           ccACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACAcc            >  1:143128/1‑140 (MQ=255)

                                                                                                                           ccACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGAGCGAGCAATATCAACGTTGTTTTTGGTGCGAGGGGGGGGACTTGAAACCACACGTCCGAAAGGACACTAACAcc            >  1:3216875/1‑140 (MQ=25)

                                                                                                                            cACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCt           >  2:3625053/1‑140 (MQ=255)

                                                                                                                            cACGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCAAAGTGCGAGCAATATCAACGTGTTTTTTGTATCGACGGCGGGGACTTCAACCCCCACGTCCGTAAGGACACTAACACCt           >  2:5727751/1‑140 (MQ=21)

                                                                                                                             aCGTCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTg          >  2:1748483/1‑140 (MQ=255)

                                                                                                                                tCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCCCCTTCGCCCAGATCGAGGACTTTCAACGTGGTTTTTGGTGCGAGGGGGGGGCGTTGAACCCCCACGTCCGTGAGTACACTGACAGCTGAAg       >  1:7601787/1‑140 (MQ=21)

                                                                                                                                tCCGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTCAGGACACTAACACCTGAAg       >  1:7898063/1‑140 (MQ=255)

                                                                                                                                  cGTAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCt     >  1:329755/1‑140 (MQ=255)

                                                                                                                                    tAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCACTATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGTACCCCCACGTCCGAAAGGACACTAACACCTGAAGCTAg   >  1:3120808/1‑140 (MQ=255)

                                                                                                                                    tAAGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAg   >  1:4849573/1‑140 (MQ=255)

                                                                                                                                     aaGAACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAgc  >  1:5278287/1‑140 (MQ=255)

CCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCACAGTCATCTTACTTTTTTTGATATCGCCTCGTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGCGCGTCTACCAATTCCGCCACCTTCGCCCAGTGCGAGCAATATCAACGTGGTTTTTGGTGCGAGGGGGGGGACTTGAACCCCCACGTCCGTAAGGACACTAACACCTGAAGCTAGC  >  NZ_CP025268/4608018‑4608290

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`