| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 4,641,859 | A→G | S119P (TCC→CCC) | arcA ← | two‑component system response regulator ArcA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,641,859 | 0 | A | G | 99.8% | 1919.3 / NA | 551 | S119P (TCC→CCC) | arcA | two‑component system response regulator ArcA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (324/226); minor base T (0/1); total (324/227) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 553 total aligned reads displayed.
GCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACATTC > NZ_CP025268/4641722‑4641995 | cgcgGCAGCTTGTACTGCTCGCCAACCGGGCCGATCAACGCACGGCTGTAGATGTCCAGTGCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAg < 1:6627450/140‑1 (MQ=255) gcgGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGAAAGTACCCAGATTCATGGTCCGGGGCAGTAgg > 2:5693158/1‑140 (MQ=255) tGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCa < 1:1910937/140‑1 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACgtctcg > 2:7542266/1‑135 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 2:6515214/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 2:1588068/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 1:4762482/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 1:3146842/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 1:2226681/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 2:9032019/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 2:9185299/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 1:1182341/1‑140 (MQ=255) tCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGt > 1:5798489/1‑140 (MQ=255) tCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGt > 2:8651415/1‑140 (MQ=255) tCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGt > 1:3524815/1‑140 (MQ=255) cGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTc > 1:4566350/1‑140 (MQ=255) cATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGt > 1:5461383/1‑140 (MQ=255) gggCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCAcg < 1:499811/140‑1 (MQ=255) gggCCGATCAACGAACGGCTGTTGATGTCCAGGTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCAcg < 1:7941017/140‑1 (MQ=255) cGATCAACGAACGTCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCggg < 2:1347980/140‑1 (MQ=255) gATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGGAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGt > 2:4221186/1‑140 (MQ=255) aTCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCGTCGCTGACAGTACCCAGATTAATGGTACGGGGCAGGAGGTTGCGTGCACGAATCGTCAGGTCACGCGGGtt > 2:515054/1‑140 (MQ=255) tCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTg < 1:5507247/140‑1 (MQ=255) aacgaacgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGaa < 1:6253704/140‑1 (MQ=255) aacgaacgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGaa < 1:2431428/140‑1 (MQ=255) ccgGCTGTTGATGTCCAGTTCCCAACCAATGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGtt < 2:686102/139‑1 (MQ=255) acgGCTGTTGATGTCCAGTTCCCAACCATTGATCTTGTAGCTTTCAAAGCTACGACGTTCTTCGCTGTAAGTACCCAGATTCATTGTACGGGGCAGTAGTGTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGtt < 1:7390931/140‑1 (MQ=255) acgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGtt < 2:3525373/140‑1 (MQ=255) acgGATGTTGATGTCCAGTTCCCAACCATTTAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGTTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGtt < 2:9447540/140‑1 (MQ=255) ggCTGTTGATGTCCAGGTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCACGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTg < 1:6421290/140‑1 (MQ=255) gCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTgg < 1:898864/140‑1 (MQ=255) cTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGt < 1:2844857/140‑1 (MQ=255) tGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTg < 1:8244957/140‑1 (MQ=255) tGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTg < 1:206433/140‑1 (MQ=255) tGTTGATGTCCAGGTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGAGTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTg < 2:7420374/140‑1 (MQ=255) tGATGTCCAGTTCCCAACCATTGACCTTGTAGCTTTCCCCGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATg < 1:7731550/140‑1 (MQ=255) gATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGt > 2:8865941/1‑140 (MQ=255) aTGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTCCGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTa > 1:9509372/1‑140 (MQ=255) aTGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTa < 2:144303/140‑1 (MQ=255) aTGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTa < 1:4009221/140‑1 (MQ=255) aTGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTa < 2:8375520/140‑1 (MQ=255) gTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGt > 1:2615110/1‑140 (MQ=255) cAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCAt > 2:7750602/1‑140 (MQ=255) gTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCt > 1:2990357/1‑140 (MQ=255) gTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCt > 2:6015772/1‑140 (MQ=255) gTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCt > 1:889193/1‑140 (MQ=255) gTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTAACCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCt > 2:3662837/1‑140 (MQ=255) cccAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCa < 1:6537958/140‑1 (MQ=255) cAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCAcc < 1:1007020/140‑1 (MQ=255) cAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCAcc < 2:7092603/140‑1 (MQ=255) ttGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTc > 2:7250329/1‑140 (MQ=255) tGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGACCGGTTTGGTGATGTAGTCATCTGCACCGATTTCg < 2:2010010/140‑1 (MQ=255) cTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGc > 1:9273200/1‑140 (MQ=255) ttGTAGCTTTCAACGCTACGACGTTCTTCGCGGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGcc < 1:3791642/140‑1 (MQ=255) gTAGCTTTCACCGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCga < 2:6370378/140‑1 (MQ=255) gTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCga > 2:3443976/1‑140 (MQ=255) gCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGaa > 2:529239/1‑140 (MQ=255) tttCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGCATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAAtt < 2:312796/140‑1 (MQ=255) ttCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAAttt > 2:4414432/1‑140 (MQ=255) ttCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAAttt > 2:2898801/1‑140 (MQ=255) tCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTGCGAGGCCGAGAAtttt > 1:6076150/1‑140 (MQ=255) aaCGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTAt < 1:8611591/140‑1 (MQ=255) tACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATg > 1:5206601/1‑98 (MQ=255) tACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACt > 2:2473053/1‑140 (MQ=255) tACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACt > 1:8399521/1‑140 (MQ=255) tACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGACGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACt > 1:7590795/1‑140 (MQ=255) tACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGGTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGACTTTTATCGACt > 1:4254042/1‑140 (MQ=255) cgacgTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTc > 2:1152482/1‑140 (MQ=255) cgTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGtt > 2:1680981/1‑140 (MQ=255) cgTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGtt > 1:8094316/1‑140 (MQ=255) cGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACgg > 1:330243/1‑140 (MQ=255) cGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACgg > 2:803994/1‑140 (MQ=255) gCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGc < 2:398226/140‑1 (MQ=255) gCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGc < 2:4882859/140‑1 (MQ=255) tGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGACAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCa < 1:6860558/140‑1 (MQ=255) aCAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGt > 1:1334920/1‑140 (MQ=255) aCAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCAAGGCCAGt > 2:4615059/1‑140 (MQ=255) cAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTc < 2:9353182/140‑1 (MQ=255) gTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAg > 1:4428877/1‑140 (MQ=255) cAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACa > 1:7125521/1‑140 (MQ=255) aGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGGTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACAt < 1:1623820/140‑1 (MQ=255) aGATTCATGGTACGGGGCAGTAGGTTGCGAGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCTTTGTCACGGCCAGTCAGGAACAt < 1:2754504/140‑1 (MQ=255) gATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATc > 2:3008786/1‑140 (MQ=255) gATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATc > 2:1064004/1‑140 (MQ=255) ttCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCaa > 2:2367679/1‑140 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACg < 2:8250131/140‑1 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACg > 2:2739268/1‑140 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACg > 1:3688343/1‑140 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACg > 2:8569679/1‑140 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACg > 1:3450301/1‑140 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACg > 1:9166496/1‑140 (MQ=255) tGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCa > 2:8101923/1‑140 (MQ=255) tGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCa > 2:7880982/1‑140 (MQ=255) ggTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCaa > 1:693641/1‑140 (MQ=255) aCGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACAt > 1:5736292/1‑140 (MQ=255) cGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGACTTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACAtt > 2:2155101/1‑140 (MQ=255) cGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACAtt > 2:6654797/1‑140 (MQ=255) cGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACAtt > 1:1683009/1‑140 (MQ=255) cGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACAtt > 1:7915434/1‑140 (MQ=255) cGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACAtt > 1:4062211/1‑140 (MQ=255) | GCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACATTC > NZ_CP025268/4641722‑4641995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |