| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,955,375 | (C)6→5 | intergenic (‑38/‑273) | aspS ← / → yecD | aspartate‑‑tRNA ligase/hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,955,370 | 0 | C | . | 99.4% | 2975.9 / 6.7 | 628 | intergenic (‑33/‑278) | aspS/yecD | aspartate‑‑tRNA ligase/hydrolase |
| Reads supporting (aligned to +/- strand): ref base C (1/0); major base . (328/294); minor base G (1/3); total (331/297) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.44e-01 | |||||||||||
Only 100 of 662 total aligned reads displayed.
ATGAAGATCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTACCACTT > NZ_CP025268/1955231‑1955504 | tGAAGATCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATGcc > 2:737393/1‑140 (MQ=255) tGAAGATCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATGcc < 1:2156484/140‑1 (MQ=255) tGAAGATCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATGcc < 1:6647077/140‑1 (MQ=255) aGATCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATGccccc > 2:86288/1‑140 (MQ=255) aTCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATGccccctg > 1:6370633/1‑138 (MQ=255) cAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATGccccctgct > 2:2435800/1‑136 (MQ=255) gCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTgcg > 2:3438215/1‑140 (MQ=255) tACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTgcgct > 1:9197348/1‑139 (MQ=255) gATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGAc < 2:4095730/140‑1 (MQ=255) cACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCaa > 1:1337386/1‑140 (MQ=255) cACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCaa > 1:1636328/1‑140 (MQ=255) acgacgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAg > 2:1610026/1‑140 (MQ=255) gacgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTc < 2:3639206/140‑1 (MQ=255) gacgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTc > 1:3450754/1‑140 (MQ=255) cgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGc < 2:283266/140‑1 (MQ=255) cgacgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGc < 2:6574180/140‑1 (MQ=255) cgGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGc < 2:2066894/140‑1 (MQ=255) ggTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTTGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCg < 2:1445484/140‑1 (MQ=255) ggTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGCGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCg < 2:6225433/140‑1 (MQ=255) gTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGt < 2:8770340/140‑1 (MQ=255) gACCCAACCACACCGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTGAGCTGCCGGCGGA‑GGCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg < 2:1898441/140‑1 (MQ=255) gACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg < 1:5632487/140‑1 (MQ=255) gACCCAACCACACAGAGTCACCTGCTGCCCCAAGTGGGACAAACGGAGCTGTCCACAATCTTCTGTACGCAAGAGATATCCCTTCACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCATGTCGCAGCGTTAg < 2:1726707/140‑1 (MQ=255) gACCCAACCACACACAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATAGTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAg < 2:8112344/140‑1 (MQ=255) ccAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg < 1:6479563/140‑1 (MQ=255) ccAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg < 2:5383076/140‑1 (MQ=255) ccAACCACACAGAGTCACCAGCTGCCCCACGTGGGACACCCGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg < 2:7842728/140‑1 (MQ=255) aaCCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATAGTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTa < 1:7631461/140‑1 (MQ=255) aCCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTAt > 1:6779221/1‑140 (MQ=255) acacaGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTc < 1:3904887/140‑1 (MQ=255) cacaGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTg < 2:489906/133‑1 (MQ=255) agagTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACaa < 2:8352194/140‑1 (MQ=255) agagTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACaa < 1:2769057/140‑1 (MQ=255) agTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATCTTCTGTACGCATGAGATATCCCTTACCTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGTCCAAGTCGCAGCGTTAGCTGTATGGCACAACt > 1:4672348/1‑140 (MQ=255) agTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACt > 2:9090925/1‑140 (MQ=255) aCCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACtgaat > 2:2262591/1‑140 (MQ=255) ccTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACtgaatg > 1:1022677/1‑140 (MQ=255) ccccACGTTGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCAGCCGGCGGATG‑CCCCCTGCAGCGCAGGTGACCAAGTCGCAGCGTTAGCAGTATGTCACAACTGAAAGAAAAAAg > 1:7136159/1‑140 (MQ=255) ccACGTGGGACAAACGGATCTGTACACAATATTCTGTACGCATTAGATAACCCATAACTTATCTGCCGGCGGATGCCCCCAT‑CTTCGCAGTAGACCAAGTCGAAGCGTTAGCTGAAAGTCACAACTGAAAGAAAAAAgtc > 2:3709980/1‑138 (MQ=255) ccACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggc < 1:8786016/140‑1 (MQ=255) aCGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTACCTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggcgg < 1:2051989/140‑1 (MQ=255) aCGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggcgg < 1:2872131/140‑1 (MQ=255) aCGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggcgg > 1:5158292/1‑140 (MQ=255) aCGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAACTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAggcgg < 1:2333616/140‑1 (MQ=255) aaCGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACt < 1:1279523/140‑1 (MQ=255) aCGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTg > 2:4517973/1‑140 (MQ=255) gCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCta > 1:4007387/1‑127 (MQ=255) cTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAAtt < 1:3571627/140‑1 (MQ=255) tCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTg > 2:3220849/1‑140 (MQ=255) tCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTg > 1:1820620/1‑140 (MQ=255) tCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTg > 1:3363630/1‑140 (MQ=255) ccACAATATTCTGTACGCATGAGATATCCCTTAACTTATCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGc < 1:5288561/140‑1 (MQ=255) ccACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGc < 1:737393/140‑1 (MQ=255) ccACAATAGTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGc < 2:6794659/140‑1 (MQ=255) acaATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCg < 2:5235564/140‑1 (MQ=255) acaATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCg < 2:7116676/140‑1 (MQ=255) acaAGAGTCGGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATCCTGGAAATTCTGCCg < 2:919529/140‑1 (MQ=255) aaTATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCa < 1:1105884/140‑1 (MQ=255) aaTATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCa < 1:3740554/140‑1 (MQ=255) aaTATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCa < 2:1009230/140‑1 (MQ=255) aaTATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCa < 1:5415679/140‑1 (MQ=255) tCTGTACGCATGANATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTANTATACTGGAAATTCTGCCGCACCGTa > 1:6235400/1‑140 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATCCTGGAAATTCTGCCGCACCGTa > 1:4441949/1‑140 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 1:4920208/1‑140 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 2:587239/1‑140 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 1:1469607/1‑140 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 1:1558088/1‑140 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 1:2519716/1‑140 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 1:3116575/1‑140 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 1:50198/1‑140 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa < 1:5965833/140‑1 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa > 1:6860890/1‑140 (MQ=255) tCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTa < 1:9442503/140‑1 (MQ=255) tGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAag > 2:3100838/1‑140 (MQ=255) tACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAagag > 1:7864956/1‑140 (MQ=255) tACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAagag > 2:7267413/1‑140 (MQ=255) aCGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGc > 1:9265368/1‑140 (MQ=255) aTGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTgg > 1:4741273/1‑140 (MQ=255) aTGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTgg > 2:428330/1‑140 (MQ=255) tGAGATATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGc < 2:5675456/140‑1 (MQ=255) tGAGATATCCCTTAACTGAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCACGTCGCAGCGTTAGCTGTATGTCACAACTGCATGAAAAAAGGCGGCTATTATACTCGAAATTCTGCCGCACCGTAAGAGCCTGGc < 2:6952100/140‑1 (MQ=255) gagaTATACCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGAACAAGTCGCAGCTTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTTTTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGcc < 2:934579/140‑1 (MQ=255) agaTATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGccc > 2:6347683/1‑140 (MQ=255) agaTATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGccc > 2:1159404/1‑140 (MQ=255) agaTATCCCTTAACTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGccc > 1:8436252/1‑140 (MQ=255) aaCTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACg > 1:2960101/1‑140 (MQ=255) aCTTAGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGc > 1:6986701/1‑140 (MQ=255) aGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCTGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCGTCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCg > 2:2487947/1‑140 (MQ=255) aGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCg > 2:7540039/1‑140 (MQ=255) aGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCg > 1:1737099/1‑140 (MQ=255) aGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCg > 1:5511265/1‑140 (MQ=255) aGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCg > 1:7989760/1‑140 (MQ=255) aGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCg > 1:8126627/1‑140 (MQ=255) aGCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCg > 2:3280713/1‑140 (MQ=255) gCTGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACTACTGAATGTAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTCAGAGCCTGGCCCGCGCTGGACCGCCTCGt > 1:7217079/1‑140 (MQ=255) tGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTa < 1:8610432/140‑1 (MQ=255) tGCCGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTa > 2:268134/1‑140 (MQ=255) ccGGCGGATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTAcc > 1:5779036/1‑140 (MQ=255) cggATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTACCACtt < 2:6136312/140‑1 (MQ=255) cggATG‑CCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTACCACtt < 2:4575374/140‑1 (MQ=255) | ATGAAGATCAGGCTACCAAGATCACGACGACGGTTGACCCAACCACACAGAGTCACCTGCTGCCCCACGTGGGACAAACGGAGCTGTCCACAATATTCTGTACGCATGAGATATCCCTTAACTTAGCTGCCGGCGGATGCCCCCCTGCTGCGCAGGTGACCAAGTCGCAGCGTTAGCTGTATGTCACAACTGAATGAAAAAAGGCGGCTATTATACTGGAAATTCTGCCGCACCGTAAGAGCCTGGCCCGCGCTGGAACGCCTCGTTACCACTT > NZ_CP025268/1955231‑1955504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |