| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,629,176 | (T)7→8 | pseudogene (141/392 nt) | ydeI ← | YdeI family stress tolerance OB fold protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,629,169 | 1 | . | T | 94.2% | 1063.1 / 48.4 | 294 | pseudogene (148/392 nt) | ydeI | YdeI family stress tolerance OB fold protein |
| Reads supporting (aligned to +/- strand): ref base . (3/14); new base T (80/194); total (84/210) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 306 total aligned reads displayed.
GACGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAATG > NZ_CP025268/1629030‑1629302 | gACGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑a > 2:2043705/1‑140 (MQ=255) aCGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑‑t < 1:6316665/140‑1 (MQ=255) aCGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑‑t < 1:9369057/140‑1 (MQ=255) cGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑‑tt < 1:1412481/140‑1 (MQ=255) ggCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑‑tt‑t > 2:8711356/1‑140 (MQ=255) cGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑‑tt‑tttt > 1:9225866/1‑140 (MQ=255) aCATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGt > 1:51210/1‑140 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTc > 2:7607664/1‑140 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTc > 1:5753632/1‑140 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTc > 1:4300548/1‑140 (MQ=255) aTTAATTTCACCGCTCTTATCGCGAAAAACGTAAAGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTc > 2:3152903/1‑140 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAg < 2:3464059/140‑1 (MQ=255) cACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAg < 1:3507162/140‑1 (MQ=255) aCCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGc > 1:176245/1‑140 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGcc < 1:8692166/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGcc < 2:813564/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGcc < 2:4824939/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGcc < 1:1955264/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGcc < 2:4317056/140‑1 (MQ=255) ccGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGcc < 2:4561084/140‑1 (MQ=255) cGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCa < 2:3786877/140‑1 (MQ=255) cGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCa < 1:8270080/140‑1 (MQ=255) gCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑ATTTT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCa < 1:5536121/140‑1 (MQ=255) gCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCAt < 2:4692008/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCAtc < 1:4932942/140‑1 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCAtc > 2:7929584/1‑140 (MQ=255) ctctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCAtc < 1:278370/140‑1 (MQ=255) ctTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCAtctt > 2:4466348/1‑140 (MQ=255) aTCGCGCACAACGTAACGGTCCTCTCCCAAGTGCGAACTCACATTACCGCGTAGTGAAACCGCAGCGCCATCGTGCAGGGTTTGTGCGAAATCACCGGTC‑A‑‑TTATGTT‑T‑GCATCAACGGGTCCGCGATAGCCATCTTCTa < 2:2149762/140‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAACCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATCGCCATCGTCTa > 2:4054987/1‑140 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCCTCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTa < 2:916951/140‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTa < 1:2338861/140‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTa < 2:9251879/140‑1 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTa > 1:4202664/1‑140 (MQ=255) aTCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTa < 1:4636429/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 2:2523648/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 2:2627111/140‑1 (MQ=255) gAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCa < 1:5268932/140‑1 (MQ=255) aaaCGTAACGGTCCTCTACATTGAGAGAAATCAAATTACCGCTTAGTTAAACCGAATCGCCATCGTGCATGTTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCTGTTCAGCGATAGCCATCTTCTATTGAATGa < 2:7807010/140‑1 (MQ=255) aaCGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAg < 1:2735207/140‑1 (MQ=255) actaaaCGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCCTCGTGCATGGTTTTTGCGAAATCAACGTTC‑AT‑TT‑TTTT‑T‑GCATCACCGGTTCCGCGATAGCCATCTTCTATTGCATGAgg < 2:7866285/136‑1 (MQ=255) aCGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGgcggcg < 1:792331/140‑1 (MQ=255) gTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTATTGAAACCGAATCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTg < 1:7176281/140‑1 (MQ=255) tCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTa < 2:4214524/121‑1 (MQ=255) tCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTgg > 2:1724926/1‑140 (MQ=255) ctcCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAGATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCt > 1:32651/1‑140 (MQ=255) ctcCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCt < 2:7376101/140‑1 (MQ=255) tcCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTg > 1:6502084/1‑140 (MQ=255) ttgatagaAATCAAATTACCGCGTAGTGAATCCGAAGCGCCATCGGGCATCGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:7671206/135‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 1:2394474/140‑1 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc > 1:3157050/1‑140 (MQ=255) ttGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATc < 2:3127847/140‑1 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑TCATAAAAGGTTCCGGGATAGCCCTCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 1:4809991/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 2:6109835/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 2:9287726/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 2:8830519/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 1:5239405/1‑140 (MQ=255) tgtgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATcc > 2:3002249/1‑140 (MQ=255) tgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTg > 2:2002287/1‑140 (MQ=255) tgAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGAC‑A‑‑TT‑TTTTAT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTg > 1:947648/1‑140 (MQ=255) agaAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGtt > 2:6493552/1‑140 (MQ=255) gaAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGttt > 1:7544041/1‑140 (MQ=255) tCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaaa < 2:1273250/140‑1 (MQ=255) tCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTaaa < 2:7236559/140‑1 (MQ=255) ttACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGcc < 2:6625002/140‑1 (MQ=255) tACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGccc < 1:1620768/140‑1 (MQ=255) aCCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCt < 2:706277/140‑1 (MQ=255) aCCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCt < 1:4044989/140‑1 (MQ=255) cgcgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAAc < 2:5218996/132‑1 (MQ=255) gcgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGt < 1:1271258/140‑1 (MQ=255) cgTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTc > 2:3616640/1‑140 (MQ=255) aGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑‑TT‑TTTTGT‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATc < 2:6712425/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 2:5629342/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 2:7152168/140‑1 (MQ=255) aaaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGcc < 1:7028549/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 1:2046053/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 2:2362749/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 2:6751356/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCa < 1:3817633/140‑1 (MQ=255) aaCCGAAGCGCCATCGTGCATGGTTTGTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAACCCGCCCTGGTCATCTGCCa < 2:4993965/140‑1 (MQ=255) ccGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAAc > 2:5983358/1‑140 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa > 2:9411294/1‑140 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa > 1:1188150/1‑140 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa > 1:3362670/1‑140 (MQ=255) aaGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCa < 1:7757743/140‑1 (MQ=255) gcgcCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑‑TT‑TTTT‑TAGAATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGACCTGGACATATGCCAACGCATa > 2:9023809/1‑140 (MQ=255) ccATCGTGCATGGTTTTTGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAgg > 2:118225/1‑140 (MQ=255) ctCGTGCATGGTTTTGGCGAAATCCACGGTC‑A‑‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCCTGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 2:6371591/139‑1 (MQ=255) tCGTGCATGGTTTGTGCGAAATCAACGGTCAA‑‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCAGGAGGCGGCGGTGGCGCTGCATCCTGTTTTAACCCGCCCTGGTCATCTGCCAACGCATAAGGCAt < 2:8428720/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATGGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:4974840/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:7421246/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:5496149/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:8987645/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:1509715/140‑1 (MQ=255) tttttGCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGGTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGaaaa < 1:304138/140‑1 (MQ=255) tttttGAGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCAGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACTAGaaaa < 1:8879101/140‑1 (MQ=255) gCGAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGc < 2:2894748/140‑1 (MQ=255) gAAATCAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTa < 1:5923432/140‑1 (MQ=255) cAACGGTC‑AT‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACa < 2:866549/140‑1 (MQ=255) cGGTC‑A‑‑TTGTTTT‑T‑GCATCATCGGGTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGATTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTCATACAATg < 2:6073510/140‑1 (MQ=255) | GACGGCCGCAGGAATAACGACATTAATTTCACCGCTCTTATCGCGAAAAACGTAACGGTCCTCTCCTTTGTGAGAAATCAAATTACCGCGTAGTGAAACCGAAGCGCCATCGTGCATGGTTTTTGCGAAATCAACGGTC‑A‑‑TT‑TTTT‑T‑GCATCATCGGTTCCGCGATAGCCATCTTCTATTGCATGAGGCGGCGGTGGCGCTGCATCCTGTTTTAAACCGCCCTGGTCATCTGCCAACGCATAAGGCATGACAAGAAAACTTGCTAATACAATG > NZ_CP025268/1629030‑1629302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |