| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,826,683 | (A)7→8 | intergenic (‑247/+51) | chbB ← / ← osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,826,676 | 1 | . | A | 94.7% | 2377.7 / 100.7 | 636 | intergenic (‑240/+58) | chbB/osmE | PTS N,N'‑diacetylchitobiose transporter subunit IIB/osmotically‑inducible lipoprotein OsmE |
| Reads supporting (aligned to +/- strand): ref base . (24/10); new base A (406/196); total (430/206) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 641 total aligned reads displayed.
GTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑C‑‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826538‑1826810 | gtgGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑C‑‑a > 1:6752130/1‑140 (MQ=255) aaaGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑C‑‑a‑aa‑aaa‑aa > 1:1784334/1‑139 (MQ=255) ggAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑C‑‑a‑aa‑aaa‑aaccg < 2:7058578/140‑5 (MQ=255) tataCGGTATAGACCTGAGCAATAGTATTTCTTTGACCGTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATACTTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGgcgc > 1:661683/1‑140 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGcc > 2:2703874/1‑140 (MQ=255) tataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGcc > 1:5582349/1‑140 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCg < 1:9339880/140‑1 (MQ=255) ataGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCg < 1:8996855/140‑1 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGcc < 2:9379942/137‑1 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGt > 2:4976130/1‑140 (MQ=255) aGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGt > 1:647867/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGttt > 1:2796417/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGttt > 2:1247174/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGttt > 2:6482144/1‑140 (MQ=255) aCCTGAGCAATAGTATTTCATTGACCTAATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTACGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑CAA‑‑A‑AA‑AAA‑ACCGGCGCAATGTCCGGttt > 2:4648897/1‑140 (MQ=255) aGCACTAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAAGTCGCGAAGATACTTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 2:6364112/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCACATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 2:3559530/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATCATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 1:8065035/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAATAACTCAGG‑C‑C‑‑A‑AANAAA‑ACCGGCGCAATGGCCTGTTTCCgtt > 1:6270569/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCTGG‑C‑CA‑A‑AA‑AAA‑ACCGGAGCAATGGCCGGTTTCCgtt > 1:4398529/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCACTGGCCGGTTTCCgtt > 1:2647517/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 1:3547958/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 2:9245654/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 1:9197358/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 2:5047616/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 1:1639242/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 1:7136207/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 1:974847/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 1:24479/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 1:5439556/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 2:2552814/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 2:6833330/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 2:7004350/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 1:1157664/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 2:851581/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 1:4808020/1‑140 (MQ=255) aGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCgtt > 2:2435933/1‑140 (MQ=255) aGCAATAGTATTTCTTTGAACTTATAAATATTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTAGGGCAAATAATTCGCGAAGATAATTAAGAACTAAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCAGGTTTCCgtt > 1:3476572/1‑140 (MQ=255) aGCAATAGGATTTCTTTGACCTTAGAAATTGTTTCTCCTTGACCTGTGGTTATGTCCCTCTTCACATTTCGGGCAAATAATGCGCGAAGATAATTAAGAACTCAGG‑C‑C‑‑A‑AA‑AAATTCCGGCGCTATGGCGGGTTTCCgtg > 2:3246229/1‑139 (MQ=255) cAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCATGTAATTCGCGTAGATAATTATGACCTCAGG‑C‑C‑‑A‑AACAAA‑AGGGGGGGTCTGGCCGGTTTGCgttgg > 2:7410216/1‑139 (MQ=255) tATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCa < 1:8412317/140‑1 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCaa < 2:2959609/139‑1 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAAATCGCGAAGATAATTAAGAACTCAGG‑C‑CAAA‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCaa > 2:4049232/1‑140 (MQ=255) tttCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACAGTTCGGGCAAATAATTCGCGAAGATAATGAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCAGTTGTTACTCAAg > 2:5729605/1‑140 (MQ=255) cTTTGACCTTAGAAATTGTTTCTCCTTGACCTGTGGTTATGTCCCTCTTCTCATTTCGGGCAAATAATTCGCGTAGATAATTAAGAAGTCAGG‑C‑C‑‑ATAA‑AAA‑ACCGGCTCAATGGCGGGTTTCCGGTGTTACTCAAGCtt > 2:5604930/1‑140 (MQ=255) cTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACg > 2:8842479/1‑140 (MQ=255) tataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGaa > 2:4444439/1‑140 (MQ=255) tataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAAGGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGaa > 1:8345109/1‑140 (MQ=255) tataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATATCGGGCAAATAATTCGCGAAGATAATGAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGaa > 2:7908633/1‑140 (MQ=255) ataAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑C‑‑A‑AA‑AAA‑ACAGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAtt > 2:3495196/1‑140 (MQ=255) tctcCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTc > 1:3386386/1‑140 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGATTTGATTACTTCGCa < 2:5331491/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:8660156/140‑1 (MQ=255) ccTTGACCTGTGGTTATGACCCTCTTAACTTTTCGGGAAAATAATTCGCGAATATAATTATGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCAGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:1997385/140‑1 (MQ=255) ttGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGc < 1:5884388/140‑1 (MQ=255) cTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCtgtg < 1:3696554/140‑1 (MQ=255) tgGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCACTGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGAt > 2:66542/1‑140 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 1:234470/140‑1 (MQ=255) gTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCa < 2:3139022/140‑1 (MQ=255) aTGACCCTCTTCACATTTCGGGCAATTAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCTCAATGTCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtg > 1:8468149/1‑140 (MQ=255) aTGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAAGTCAGACCTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCCATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAAGTGATTACTTCGCAGCCTGTGGATCAgtg > 2:185198/1‑140 (MQ=255) tGACCCTCTTCACATTTCGGGCAAATAATACGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAgtgt > 1:102767/1‑140 (MQ=255) gACCCTCTTCACTTTTCGGGCAAATAATTCGCGAATATAATTATGAAAACAGGAC‑A‑‑A‑AA‑AAA‑ACCGTCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGATTTGATTACTTCGCAGCCTGTGGATCAGTGTc < 1:2156802/140‑1 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:4309296/140‑1 (MQ=255) gACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTc < 2:4756270/140‑1 (MQ=255) ccTCTTCACATTTCGGGCAATTAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CAAA‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGACTTGATTACTTCGCAGCCTGTGGATCAGTGTCGt > 2:7546878/1‑140 (MQ=255) tctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt < 1:4889792/140‑1 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCACTGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 1:3905383/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTCTTc > 2:8283265/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 1:3992168/1‑140 (MQ=255) ctTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTc > 1:6942624/1‑140 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:3047014/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:9027162/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:4337320/140‑1 (MQ=255) acaTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 1:7643515/140‑1 (MQ=255) acaTTACTGTCACATACTTAGCGAATCTAATTCAGAAATCAGG‑C‑CA‑A‑AA‑AAA‑ACCTGCGCAATGGCCGGTTTCCGTTGTTCCTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGca < 2:6774429/140‑1 (MQ=255) caTTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGcac > 1:7952334/1‑140 (MQ=255) tttCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAg < 2:5488339/140‑1 (MQ=255) tttCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAg > 1:8811408/1‑140 (MQ=255) tCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGt > 1:5235834/1‑140 (MQ=255) cGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTAtt > 1:7437412/1‑129 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 1:3169238/1‑140 (MQ=255) gggCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCt > 1:8576067/1‑140 (MQ=255) ggCAAATAATTCGCGAAGATAATTAAGAACACAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTg < 2:721964/140‑1 (MQ=255) aatTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCg < 1:7298853/140‑1 (MQ=255) aatTCGCGAAGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCg < 1:5724053/140‑1 (MQ=255) aGATAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCa < 2:4539899/89‑1 (MQ=255) aTAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGAc < 1:4629628/140‑1 (MQ=255) aTAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGAc < 2:1701487/140‑1 (MQ=255) aTAATTAAGAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGAc < 1:1316749/140‑1 (MQ=255) tAAGAACTCAGG‑C‑C‑‑A‑AATAAA‑ACCGGCGCAATGGCCTGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTTGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTc < 1:5037858/140‑1 (MQ=255) gAACTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCgg > 2:2148735/1‑140 (MQ=255) aaCTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt < 1:4046922/140‑1 (MQ=255) aCTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt < 1:6149759/139‑1 (MQ=255) aCTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGt > 2:6149759/1‑139 (MQ=255) aCTCAGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTa > 2:3851414/1‑140 (MQ=255) aGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTctcat > 2:8162998/1‑140 (MQ=255) aGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTatcat > 1:1946102/1‑140 (MQ=255) aGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTatcat > 2:1453276/1‑140 (MQ=255) aGG‑C‑CA‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTatcat > 2:5908566/1‑140 (MQ=255) | GTGGCTGAAAGGAGTATACGGTATAGACCTGAGCAATAGTATTTCTTTGACCTTATAAATTGTTTCTCCTTGACCTGTGGTTATGACCCTCTTCACATTTCGGGCAAATAATTCGCGAAGATAATTAAGAACTCAGG‑C‑C‑‑A‑AA‑AAA‑ACCGGCGCAATGGCCGGTTTCCGTTGTTACTCAAGCTTTCAGACGAATTGATTACTTCGCAGCCTGTGGATCAGTGTCGTATTCAGCACAGGTCTGATAACCGGAGTTGATGACATGTCCGGTATCAT > NZ_CP025268/1826538‑1826810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |