| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,773,671 | (C)5→6 | intergenic (+161/‑55) | yfjQ → / → yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,773,666 | 1 | . | C | 95.5% | 1666.0 / 64.9 | 519 | intergenic (+156/‑60) | yfjQ/yfjR | DUF932 domain‑containing protein/WYL domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base . (18/5); new base C (320/174); total (340/179) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 567 total aligned reads displayed.
CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 | cGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCg < 1:1004646/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 2:5037277/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 1:5893722/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc < 1:2113803/140‑1 (MQ=255) ttAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGGGATAGCTGTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑ccc > 1:2025639/1‑140 (MQ=255) gaagttCGGACACCACCTGTCCGCATCGCTATGTGCTCGGTTGCCTCAATCCCCCGGTTATCGCTGTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑cccg < 2:6458997/135‑2 (MQ=37) tCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAACTAAAACATAGTTTCTGCGTTGTCCATACCCTGTCCG‑c‑c‑cccctcgtt > 1:2761055/1‑134 (MQ=255) cGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAATAATGAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑CGCCCTCtttt > 1:6209354/1‑139 (MQ=37) ggACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTaa < 1:6573756/140‑1 (MQ=255) acacCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAATATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTATAg > 1:2677313/1‑140 (MQ=255) caccTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTGACCCCCGTTACATCTGGCTTTTGCAGAAATAAATATTAGTTTCTGCGTTGTCCATACCCTGGCCGCC‑C‑CCCTCTTTATAGTatt > 1:4455731/1‑138 (MQ=255) accTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATc < 1:2863206/140‑1 (MQ=255) gTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCAcat < 1:8554338/140‑1 (MQ=255) cATCGCTATGTGCTCGTGTGCGTCATTCCCCCGGGTAGAGCTGTTAACGCCCGGTACCTCTGGGTTTTGCAGAAATAAAAAATAGTTGGTGCGTTGTCCATACCCTGTCCG‑CGC‑CCGTCTTGAAAGTAGTCACATCAgtt > 2:3769196/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTGATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGGTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCAttt > 2:5190171/1‑140 (MQ=255) cATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGGTATAGCTGTGAAACCCCGATACATCTGGCTTTTGGAGTCATAATAACTAGTTTCTGCGTTGTCGATACCCTGTACG‑C‑CGCCCTCTTGAATGTTATCCcatcagtg > 2:6937431/1‑137 (MQ=255) cTATGTGCTCGTGTGCCTCAATCCCCCGGTTTTCGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTtcagt < 1:8384476/140‑1 (MQ=255) tgCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATAACCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGtt < 2:566593/140‑1 (MQ=255) gCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATTCCCTGTCCGCC‑C‑CCCTCGTTAAAGTGATCCCATCATTTGCAGTCAGTTa > 1:5575612/1‑140 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATTGTTTTTAACCCCCGTTACATCTGTCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:6242942/140‑1 (MQ=18) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCTTTACATCTGGCTTTTGCATAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 2:3098000/140‑1 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:9289702/140‑1 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:79578/140‑1 (MQ=255) cTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTaa < 1:775736/140‑1 (MQ=255) gtgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTc < 1:3901188/140‑1 (MQ=255) tgCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAATATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTcc > 1:1622036/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCTGTCCGGTAACTTTCCTg > 1:994879/1‑140 (MQ=18) ccTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTGAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTg > 2:3405739/1‑140 (MQ=255) ccTCAATCCCCCGGTTATAGCTTTTAAACCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGAGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAATTAATCACATCATTTTCAGTCAGTTAACTTTCGTg > 1:5284427/1‑140 (MQ=18) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGaa < 2:35315/140‑1 (MQ=255) aTCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGaa < 1:3560342/140‑1 (MQ=255) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTATAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 2:6636695/140‑1 (MQ=255) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt < 1:9111480/140‑1 (MQ=255) tCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAt > 2:8685675/1‑140 (MQ=255) cccccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtc < 1:3279981/140‑1 (MQ=255) ccccGGTTATAGCTTTTAACCCGCGTTACATCTGGCTTTTGCAGAAATAAAAATTAGTTTCTGCGTTGTCCTTACCCTGTCCGCC‑C‑CCCTGTTTAAAGTACTCACCTCATTTTCAGTCAGTGACCTTTCCTGGAGAAtct > 2:6317563/1‑140 (MQ=18) ccGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctct > 1:4533235/1‑140 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc > 1:4282451/1‑140 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc < 1:7324059/140‑1 (MQ=255) cGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACACTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAAtctctc > 2:2603600/1‑140 (MQ=255) gTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCCTACCCTGTCCGCC‑C‑CCCTCTGTAAAGTAATCACATCCTTTTCAGTCAGTGAACTTTCCTGGAGAAtctctctt > 2:4405196/1‑138 (MQ=255) gTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCATTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCAt < 2:6116196/140‑1 (MQ=255) taGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGaca < 1:2385204/140‑1 (MQ=255) aGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGacac < 1:8145181/140‑1 (MQ=255) aGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGacac > 1:6790608/1‑140 (MQ=255) ttAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAAc < 1:3021286/110‑1 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAATTAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTGAGTCAGTTAACTTTCCTGGAGACTCTCTCATGACACAGGCAg > 1:7501911/1‑140 (MQ=17) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 1:4601551/1‑140 (MQ=255) tAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGGAATCACATCATTTTCAGTCAGTTCACTTTCCTGGAGAATCTCTCATGACACAGGCAg > 1:1417094/1‑140 (MQ=255) cccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAc < 1:1963437/140‑1 (MQ=255) ccccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcg < 1:2542626/140‑1 (MQ=255) ccGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAAcgcc > 1:7149525/1‑140 (MQ=255) cGTTCCATCTGGCTTTTGCAGAAATAAAAAATAGGTTCTGCGGTGTACTTACCCTGTCCG‑CAC‑CCCTGTGTATTGTAATGACATCTTTTTCAGTCATTTAACTTTCGTGGGGAATCGCTCATGACCGAGGgagacgggcg > 2:9049964/1‑134 (MQ=255) ttACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTATCCTGGAGAATCTCTCAGGACACAGGCAGAACgccgcc > 1:5365172/1‑140 (MQ=255) cTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGAcc < 2:5485389/140‑1 (MQ=255) cTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑CACCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGAcc < 2:5395872/140‑1 (MQ=255) gCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggc < 1:4910637/140‑1 (MQ=255) gCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTGTCCTGGCGACTCTCTCATGACACAGGCAGACCGCCGCCATGACCggg > 2:7168261/1‑139 (MQ=14) cTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggct < 2:1693112/140‑1 (MQ=255) tttGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctgg < 1:1791379/140‑1 (MQ=255) tGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctggct > 2:767441/1‑140 (MQ=255) tGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCggctggct > 1:3772917/1‑140 (MQ=255) cAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt < 2:8861514/140‑1 (MQ=255) cAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgt < 2:790624/140‑1 (MQ=255) actAAAAAATACATTCAGCGTTCACCATACCCTGTCCGCC‑C‑CCCTCATTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCCCCATGACCGGCTggctgtcagg < 2:7213108/138‑1 (MQ=14) aaTAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTGTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcagg < 2:4541090/140‑1 (MQ=255) aaaaaTAGTTTCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTggctgtcaggctgt < 2:68742/140‑1 (MQ=255) tttCTGCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATa > 2:4756388/1‑140 (MQ=255) gCGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCCCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAg < 1:637703/140‑1 (MQ=255) cGTTGTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGc < 2:9191491/140‑1 (MQ=255) gTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTc < 1:5709125/140‑1 (MQ=255) gTCCATACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTc > 1:7048573/1‑140 (MQ=255) aTACCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGt < 1:3154065/140‑1 (MQ=255) tACCCGGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTCACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGtt < 2:1225473/140‑1 (MQ=255) aCCCTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTg > 1:8498874/1‑140 (MQ=255) cccTGTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGc < 2:3292276/140‑1 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1169626/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1486807/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:1888274/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:2199131/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:8350247/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:821688/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:3992924/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:7563445/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:4799911/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:5185765/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8706042/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8785310/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:5950511/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:5803578/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8810899/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8908045/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:5428466/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:1625861/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2014412/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2227433/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2786246/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:4125055/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGATGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 2:2382721/1‑140 (MQ=255) gTCCGCC‑C‑CCCTCTTTAAAGTAAGCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGt > 1:8058698/1‑140 (MQ=255) | CGTTGTTAATATCGGACACCACCTGTCCGCATCGCTATGTGCTCGTGTGCCTCAATCCCCCGGTTATAGCTTTTAACCCCCGTTACATCTGGCTTTTGCAGAAATAAAAAATAGTTTCTGCGTTGTCCATACCCTGTCCG‑C‑C‑CCCTCTTTAAAGTAATCACATCATTTTCAGTCAGTTAACTTTCCTGGAGAATCTCTCATGACACAGGCAGAACGCCGCCATGACCGGCTGGCTGTCAGGCTGTCACTGATAATCAGCCGTCTGGTTGCGGGT > NZ_CP025268/2773527‑2773800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |