| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 3,509,139 | +C | pseudogene (137/878 nt) | php ← | phosphotriesterase‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 3,509,136 | 1 | . | C | 96.8% | 2336.5 / 60.2 | 691 | pseudogene (140/878 nt) | php | phosphotriesterase‑related protein |
| Reads supporting (aligned to +/- strand): ref base . (7/15); new base C (353/315); total (361/330) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.05e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 757 total aligned reads displayed.
CCACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508997‑3509270 | tGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑ccccg < 2:8479138/140‑3 (MQ=255) ttCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CCC‑cggg < 1:1172178/140‑2 (MQ=255) ttCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CCC‑cggg < 2:5658025/140‑2 (MQ=255) tacGGGAAAAACGCGACCTGGTAATAACCGTAACAGGCCACCACGAATATCCAAGTCTCGCGCATAACATCCAGCATAAATTTCTCAAAGCGCACAATTAAACGGATGGAAATCTCAATCACATTACGCACG‑CCC‑cgggt > 2:101391/3‑138 (MQ=255) tCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CCC‑cgggt < 2:387152/140‑3 (MQ=255) ggAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGtcatc < 1:7465576/140‑1 (MQ=255) ggAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGtcatc > 1:3151464/1‑140 (MQ=255) gAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGtcatca > 1:5999952/1‑140 (MQ=255) aaaCGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGt < 1:3050510/140‑1 (MQ=255) tCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCAt > 2:7611173/1‑140 (MQ=255) ccTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCAtc > 2:1957291/1‑140 (MQ=255) gTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCt < 1:5329244/140‑1 (MQ=255) aataaCCGGTACAGGCCACCACGTTGATCCCCTTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTgg < 1:3690804/140‑1 (MQ=255) aataaCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCATGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTgg < 2:3245742/140‑1 (MQ=255) aataaCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCAGAACCTCAAGCATAAATTGCGCATAGCGCCCCATGTAACGGTTGGTCATCACCATCACATTACGCACGCCCC‑GGGTCATCAGGTCGGTCATCTCCTgg < 2:7455689/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTACCGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCaca > 2:8035982/1‑138 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa > 2:44343/1‑140 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa > 2:9319559/1‑140 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:5121212/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:9212480/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:1025643/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa < 1:493678/140‑1 (MQ=255) aCCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATGACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCaaa < 2:6221754/140‑1 (MQ=255) cGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATg < 2:2358020/140‑1 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa > 2:3075540/1‑140 (MQ=255) gTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGaa > 2:1233505/1‑140 (MQ=255) tACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAAc < 1:7968296/140‑1 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa > 2:3675161/1‑140 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa < 2:6510372/140‑1 (MQ=255) gCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATa < 1:7081553/140‑1 (MQ=255) gCCACCACCTTGCGCCCCGCCCCGCGCATTACATCCAGCACAACGGCCGCACTGCGCCCCCTGTAACGGTTGGTCATCCCACTCAACTGACGCACGCCCC‑GGGACATCAGGTCGTTCATCTCCGGGCAAAGGAACGCATa < 2:2794445/140‑1 (MQ=255) caccacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACt > 2:8940679/1‑140 (MQ=255) caccacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACt > 1:1527220/1‑140 (MQ=255) accacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTg > 1:7176296/1‑140 (MQ=255) ccacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGa > 1:822005/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 1:8887799/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 1:4772509/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 1:2014176/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 2:5772102/1‑140 (MQ=255) cacGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGAt > 1:7356312/1‑140 (MQ=255) tGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg > 1:5122937/1‑140 (MQ=255) tGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAgg > 1:5212383/1‑140 (MQ=255) aTCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcg > 1:9052251/1‑140 (MQ=255) ccccGTCTCGCGCATTACATCACGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc < 2:1336990/140‑1 (MQ=255) ccccGTCTCGCGCATGACATCAAGCATAAATTGCGCATGGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAggcggc < 1:2971647/140‑1 (MQ=255) ccccGACACGCGCATTCCCTCACGCATACAGTGCGCATAGCCCCCCAAGCAACGCTTGCTCAACACAATCACATTACGCACGCCCC‑CGGACATCAGGTCGTTCATCTCCTGGCAACTGAACGCATACTGATCAAggcggc < 2:7792434/140‑1 (MQ=255) cccGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCa > 1:4103570/1‑140 (MQ=255) cGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGt > 2:3737185/1‑140 (MQ=255) gTCTCGCGCATTACATCAAGCATAAATTNCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTc < 1:6258805/140‑1 (MQ=255) gTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTc > 1:2503153/1‑140 (MQ=255) tctcGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTcc > 2:878612/1‑140 (MQ=255) tctcGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTAGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTcc > 1:7627826/1‑140 (MQ=255) cgcgCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACg > 1:3979257/1‑140 (MQ=255) cgcATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACgtt > 2:2530761/1‑140 (MQ=255) cgcATTACATCAAGCATAAATTGCGCATTGCGCACCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGGTCATCTCCTGGCAAATGAACTCATACTGATCAAGGCGGCAGTCCACgtg > 2:6928484/1‑139 (MQ=255) tACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGtttt > 2:6355900/1‑140 (MQ=255) cATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTa < 1:6147280/140‑1 (MQ=255) cAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAg < 2:2214245/140‑1 (MQ=255) cAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAg > 2:1124617/1‑140 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCACATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg > 2:8222021/1‑140 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg > 1:3399626/1‑140 (MQ=255) gCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCg > 1:6778916/1‑140 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTTGCAAATGAACGCATACTGATCATGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga < 2:3439952/140‑1 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga > 1:2322650/1‑140 (MQ=255) aaaTTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGgaga > 2:6747853/1‑140 (MQ=255) ttgcgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACTCACG‑CCCAGTGTCATCAGGTCGTTCATCTCCTGGCAAATGTAAGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTATAGCCGGAGAGAt < 2:4939749/140‑1 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 1:8713461/1‑140 (MQ=255) cgcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCaa > 1:2667228/1‑140 (MQ=255) gcattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAat > 1:350666/1‑140 (MQ=255) cattgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCTCGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAata < 2:1687056/140‑1 (MQ=255) tgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGc > 2:4110160/1‑140 (MQ=255) tgcgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGc < 1:1822261/140‑1 (MQ=255) cgcCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAg < 1:9319031/140‑1 (MQ=255) ccccATGTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGAt < 2:5881322/140‑1 (MQ=255) gTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCAt < 2:4004358/140‑1 (MQ=255) gTAACGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCAt > 2:7093460/1‑140 (MQ=255) aaCGGTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATgg > 2:5434801/1‑140 (MQ=255) ggTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCg < 1:1337097/140‑1 (MQ=255) gTTGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGa < 1:8463632/140‑1 (MQ=255) ttGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 2:7295579/1‑140 (MQ=255) ttGGTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCAACTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 2:1805524/1‑140 (MQ=255) ttGGTCATCTCAATCACATTACGCACGACCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAg > 1:325860/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGga > 1:6615859/1‑108 (MQ=255) ggTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:4482436/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:5853448/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 2:4696291/1‑140 (MQ=255) ggTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAggg > 1:923660/1‑140 (MQ=255) gTCATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGgt > 2:4991900/1‑140 (MQ=255) cATCTCAATCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGgtgt < 2:1461960/140‑1 (MQ=255) aTCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCAACTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGt < 2:5321/140‑1 (MQ=255) tCACATTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTc < 1:6886818/140‑1 (MQ=255) cacaTTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCg < 2:3366563/140‑1 (MQ=255) aTTACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGAt > 1:4240544/1‑140 (MQ=255) tACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCa > 1:5600457/1‑140 (MQ=255) tACGCACGCCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGGCGGATCa > 1:1419161/1‑140 (MQ=255) acgcacgcCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 1:2193046/140‑1 (MQ=255) acgcacgcCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:6074040/140‑1 (MQ=255) acgcacgcCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaa < 2:5514317/140‑1 (MQ=255) cgcacgcCCC‑GGGTCATCCGGGCGTGCCGCTCCGGGCAAAGGAACGCATACTGATCAAGGCGGCTGTCCACGTTGTTTGGAAAGCCGGAGAGATCACTATGCAGATGCTCAGGGGCGCGGGAGTAACCCCTCGGATCaaa > 2:4269214/1‑140 (MQ=255) gcacgcCCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCaaaa < 2:3631267/140‑1 (MQ=255) | CCACATGTTCCGGGAAAAACGCGTCCTGGTAATAACCGGTACAGGCCACCACGTTGATCCCCGTCTCGCGCATTACATCAAGCATAAATTGCGCATTGCGCCCCATGTAACGGTTGGTCATCTCAATCACATTACGCACG‑CCC‑GGGTCATCAGGTCGTTCATCTCCTGGCAAATGAACGCATACTGATCAAGGCGGCAGTCCACGTTGTTTTTAAAGCCGGAGAGATCAATATGCAGATGCTCATGGGCGAGGGTGTAACCCGTCGGATCAAAA > NZ_CP025268/3508997‑3509270 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |