BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP025268	780418 =	326 (0.590)	111 (0.210) +GAAG	21/266	11.2	23.4%	noncoding (1/76 nt)	CXP41_RS04110	tRNA‑Lys
*	?	NZ_CP025268	= 2525041	422 (0.760)	111 (0.210) +GAAG	21/266	11.2	23.4%	noncoding (76/76 nt)	CXP41_RS13255	tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 331 total aligned reads displayed.

ATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGG  >  NZ_CP025268/780280‑780557

aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATgg                                                                                                                                            <  2:7053745/140‑1 (MQ=255)

  cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                          <  1:2378574/140‑1 (MQ=255)

   gaagacAGATGTTAAGCGTGTAGGATAACGTTGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCACTCTTAAAGAGTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                         >  2:419665/6‑140 (MQ=18)

   aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                         >  1:5472046/1‑140 (MQ=255)

   aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                         >  1:6796793/1‑140 (MQ=255)

   aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                         >  2:160500/1‑140 (MQ=255)

   aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                         >  2:1032422/1‑140 (MQ=255)

         aGATGTTAAGCGTGAAGGATACCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAACTCTTTCAGGTAACACCCGTATGGGTCGTTAGc                                                                                                                                   <  2:8886952/140‑1 (MQ=255)

         aGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCTAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGc                                                                                                                                   <  1:8729410/140‑1 (MQ=255)

         aGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGc                                                                                                                                   <  2:931080/140‑1 (MQ=255)

           aTGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                 >  2:9186364/1‑140 (MQ=255)

              ttAAGCTTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTCAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                                                                                                                              <  1:7180013/140‑1 (MQ=255)

              ttAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                                                                                                                              <  1:6200709/140‑1 (MQ=255)

              taaaGCGTGAAGTATAACGTTGCGCCCGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                                                                                                                              <  1:1408378/138‑1 (MQ=255)

                 aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTgg                                                                                                                           >  1:9351267/1‑140 (MQ=255)

                   cGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTa                                                                                                                         <  1:6453373/140‑1 (MQ=255)

                   cGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTa                                                                                                                         >  1:5699248/1‑140 (MQ=255)

                     tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTaga                                                                                                                       >  1:7429536/1‑140 (MQ=255)

                      gacggAAAACGTTGCGAGATCATCGGCCCGTAGGGCGAGGTAATCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTagag                                                                                                                      <  1:5034872/137‑1 (MQ=37)

                       aaGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGc                                                                                                                     >  1:8571285/1‑140 (MQ=255)

                          gATAACGTTGCTCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGAACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACACGTATGGGTCGTTAGCTCAGTTGGTATAGCAGt                                                                                                                  >  1:7638007/1‑140 (MQ=255)

                            tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTg                                                                                                                >  1:5181146/1‑140 (MQ=255)

                             aaCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa                                                                                                               <  2:6473636/140‑1 (MQ=255)

                                 ttGCGTCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATgg                                                                                                                                            >  2:909521/1‑107 (MQ=255)

                                  tGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACtttt                                                                                                          >  1:7006806/1‑140 (MQ=255)

                                    cgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGAc                                                                                                              >  2:5776063/1‑134 (MQ=255)

                                    cgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGAc                                                                                                              <  1:5776063/134‑1 (MQ=255)

                                    cgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTaa                                                                                                        >  1:9123881/1‑140 (MQ=255)

                                     gcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                       <  1:12650/140‑1 (MQ=255)

                                     cccAGCTACGCCCCGTAGGGATAGCGTCTCGAGTCATCCTGCTCGACCCACCAAACTTAAAGTTTGGCGCCGAGTATACATCTTCCAGTTAACACCCCTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                       <  2:5672529/139‑1 (MQ=21)

                                         gCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAt                                                                                                   >  1:3255097/1‑140 (MQ=255)

                                               gCCCGTAGGGAGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCg                                                                                             <  2:8227111/140‑1 (MQ=255)

                                                 ccGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                           <  1:4422617/140‑1 (MQ=255)

                                                      gggCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTc                                                                                      <  1:7940072/140‑1 (MQ=255)

                                                         tgagcgaAGCGAGTCATCCTGCAAGACACACCATTCTTATTGATTGGCCCCGAGTAATAATCTTTCAGGTAACACCCGTATGGGTGGTTTGCTCAGTTGTTATAGCAGTTTACTTTTAATGAATTGTTCGCTGGTTCGaa                                                                                   <  2:2884207/139‑1 (MQ=255)

                                                                agcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCa                                                                            <  2:3038671/140‑1 (MQ=255)

                                                                agcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCa                                                                            <  1:1003333/140‑1 (MQ=255)

                                                                agcgaGTCATCCTGCACGACACACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGTTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCa                                                                            <  2:7837563/140‑1 (MQ=255)

                                                                  cgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAAGCGTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATAATTTGGTCGCAGGTGCGAAGCCTGCACg                                                                          >  2:1389424/1‑140 (MQ=37)

                                                                        aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAACATCTTTCATGTACCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccac                                                                    <  2:4402174/140‑1 (MQ=255)

                                                                        aTCCTGCACGACACACCAATCTTAAAGATTGGCCCCGAGTAAATATCTTTCATGTAACACCCGTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccac                                                                    <  2:1201310/140‑1 (MQ=255)

                                                                          ccTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                           <  1:2216408/115‑1 (MQ=255)

                                                                                cGACCCACCAATATTAAAGATTGGCCCCGAGTAAAAATCTTTCATGTACCACCCGTTTGGGTCGTTAGCTCAGTTGGTAGAGCTGTTGACTTTTAATCTATTGGTCGCAGGTTCGTATCCTGCACGACCCACCAATTTaa                                                            <  1:4020889/140‑1 (MQ=21)

                                                                                  aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAg                                                          >  1:1736472/1‑140 (MQ=255)

                                                                                   cccACCACTCTTAAAGAGTGGCCCCGAGTAAAAATCTTTCAGGTGACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                         <  2:2199646/140‑1 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCCATTTAAAgg                                                         >  1:7490872/1‑140 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                         >  1:7257001/1‑140 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                         <  2:5001605/140‑1 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                         <  1:2954023/140‑1 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaaa                                                         >  2:5860970/1‑138 (MQ=255)

                                                                                   cccACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGATGGTAGAGCAGTTGACTTTTAATAAATTGGTCGAAGGTTCGAATCCTGCACGACCCACCAATTTaaaag                                                         >  2:9379527/1‑138 (MQ=255)

                                                                                     caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                       <  1:8868523/140‑1 (MQ=255)

                                                                                     caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                       <  1:2909773/140‑1 (MQ=255)

                                                                                      accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAtgtgg                                                      >  1:681118/1‑140 (MQ=255)

                                                                                       ccaCTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                     <  1:3122831/140‑1 (MQ=255)

                                                                                       ccaATCTTAAAGCTTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGTGTCGTTAGCTCTGTTGGTAGAGCAGTTGACTTTTTATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                     <  2:2942375/140‑1 (MQ=255)

                                                                                       ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGTTAACAACCGTATTGGTCGTTATCTCTTTTTTTATAGCTGTTGACTTTTATTATATTTGTCTAAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                     <  1:8393553/140‑1 (MQ=21)

                                                                                       ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                     <  2:3989951/140‑1 (MQ=255)

                                                                                       ccaATATTAAAGATTGGCCCCGAGTAAATATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                     <  1:4368554/140‑1 (MQ=255)

                                                                                         aaTCTTTAAGATTGGCCACGAGTAAAAATCTTTCAGGTAACACCCTTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTa                                                   <  1:6692151/140‑1 (MQ=255)

                                                                                           tCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACt                                                 <  1:5845491/140‑1 (MQ=255)

                                                                                             ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGc                                                                                            >  1:5582703/1‑95 (MQ=255)

                                                                                             ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTa                                                   <  2:7511133/136‑1 (MQ=255)

                                                                                             ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTgg                                               >  1:5445361/1‑140 (MQ=255)

                                                                                              tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGt                                              >  1:2074973/1‑140 (MQ=255)

                                                                                               aaaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTa                                             <  2:3754844/140‑1 (MQ=255)

                                                                                                  gATTGGCCCCGAGTAAAAATCTTTCACGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                          <  1:3719646/140‑1 (MQ=255)

                                                                                                   aTTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAgaga                                         <  1:8155332/140‑1 (MQ=255)

                                                                                                     tGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAATGTGGTAACTGGTAGAGAAc                                       >  2:3681183/1‑140 (MQ=255)

                                                                                                     tGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAAc                                       >  2:5577050/1‑140 (MQ=255)

                                                                                                     tGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGGGACTGGGAGAGaag                                       >  2:3385102/1‑139 (MQ=255)

                                                                                                     tGGCCCCGAGTAAAAATCGTTCAGGTAACACCCGTATGGGTCGTTAGCTGAGGTGGTAGTGCAGTTGACTTTGAATCAATTGGTCGCAGGTTCGACTCCTGCAAGACCCAGCAATTTAAAGTTGGGGACTGGgagagatc                                       >  2:8606981/1‑138 (MQ=21)

                                                                                                      ggCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGNGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                      >  1:6272603/1‑140 (MQ=255)

                                                                                                      ggCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTCATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                      >  2:7282433/1‑140 (MQ=255)

                                                                                                      ggCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                      <  1:3511834/140‑1 (MQ=255)

                                                                                                      ggCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                      >  2:4718012/1‑140 (MQ=255)

                                                                                                      ggCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                      >  1:3632233/1‑140 (MQ=255)

                                                                                                       gCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACgg                                     >  1:9018851/1‑139 (MQ=255)

                                                                                                        gtccGAGTAAAAATCATTCACTTAACACACGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                    <  2:6901117/138‑1 (MQ=21)

                                                                                                        ccccGAGTAAAAATCAATCCTTTAACACCCGTTTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                    <  1:3019441/140‑1 (MQ=18)

                                                                                                             aGTAACAATCTTTCATGTAACCCCCGTAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGa                               <  2:3215205/140‑1 (MQ=255)

                                                                                                             aGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGTTGCTGACTCGTAGAGAACGTGatcta                               >  2:6092660/1‑136 (MQ=21)

                                                                                                             aGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGa                               >  1:1850263/1‑140 (MQ=255)

                                                                                                                 actaTCTGTCAGGGAACTCGCGTCAGTGTCGTTAGCTCAGTTGGTAGAGCAGTTGTCTTTTAATCAATTGGTCGCAGGTTCGACTCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAc                           <  2:6614166/137‑1 (MQ=18)

                                                                                                                 aaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAc                           <  1:2661259/140‑1 (MQ=255)

                                                                                                                  aattCTGTCAGTTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACg                          <  1:8780908/137‑1 (MQ=255)

                                                                                                                  aaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACg                          <  2:8756705/140‑1 (MQ=255)

                                                                                                                   aaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                         <  1:1032422/140‑1 (MQ=255)

                                                                                                                       tttCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACAAATTTAAAGGAGGTTACTTGTAGAGAACGTTAAGGATAACGTTGCg                     >  2:2230819/1‑140 (MQ=255)

                                                                                                                              tAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCaa              <  1:9186364/140‑1 (MQ=255)

                                                                                                                               aaCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAACGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc             <  1:4701726/140‑1 (MQ=255)

                                                                                                                               aaCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc             <  2:2649967/140‑1 (MQ=255)

                                                                                                                                      gTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGa      >  1:8838823/1‑140 (MQ=255)

                                                                                                                                      gTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTACGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGACCGTGAAGGATAACGTTGCGTTAGCAACGGCCCGa      <  2:3165616/140‑1 (MQ=255)

                                                                                                                                       tATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTg                                                                              >  2:1834405/1‑67 (MQ=33)

                                                                                                                                       tATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGaa     >  2:5394393/1‑140 (MQ=255)

                                                                                                                                         tGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAgg   >  1:2831462/1‑140 (MQ=255)

                                                                                                                                          gggTCTTTAGCTCTGTGGGTAGATCAGTTGACTTTTAATCAATTGGTCGCAGGTACGAATCCTGAACGACCCACCAATTTAAAGGTGGTAACTGGTAGAGAACGTTAAGGATAACGTTGCGTTAGCAACGGCCCGAAggg  <  1:2311204/140‑1 (MQ=18)

                                                                                                                                          gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAggg  <  1:6890783/140‑1 (MQ=255)

                                                                                                                                          gggTCGTTAGCTCAGTTGGTAGAGCAGTTGAATTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAggg  <  2:6143231/140‑1 (MQ=255)

ATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGG  >  NZ_CP025268/780280‑780557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.