| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NZ_CP025268 | 3,982,877 | (G)8→5 | pseudogene (71‑73/1388 nt) | yifK → | amino acid permease |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP025268 | 3982875 = | 25 (0.050) | 500 (0.930) | 120/264 | 0.3 | 96.2% | pseudogene (69/1388 nt) | yifK | amino acid permease |
| ? | NZ_CP025268 | = 3982871 | 15 (0.030) | pseudogene (65/1388 nt) | yifK | amino acid permease | |||||
Only 100 of 523 total aligned reads displayed.
ACATTTGCAACACTCGATGTACCCATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGGGGGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAAT > NZ_CP025268/3982732‑3983005 | cTCGATGTACCCATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccat < 1:3003024‑M2/140‑13 (MQ=255) cTCGATGTACCCATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccat < 1:8437294‑M2/140‑13 (MQ=255) cTCGATGTACCCATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGAGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccat < 1:3496696‑M2/140‑13 (MQ=255) cccATAACGATAACCGGTACCACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTAATCGCCCTggggggcaccattggcgtcgg < 2:8202372‑M2/140‑22 (MQ=255) cccATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGATGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcgg < 2:450466‑M2/140‑22 (MQ=255) cccgaacgagAACCGGTACCACCGGAAAGCATGCAAACACCACACGAGGATTTCTGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATCTCGACCTCCTCGCCCTggggggcacaattggcgtcggc > 2:2722917‑M2/5‑118 (MQ=255) ccATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggc > 1:1943236‑M2/1‑118 (MQ=255) ccATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggc > 1:3415969‑M2/1‑118 (MQ=255) ccATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTAGGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggc > 2:6582775‑M2/1‑118 (MQ=255) cATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcc < 2:5456365‑M2/140‑24 (MQ=255) tAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGACGTCATCGCCCTggggggcccccttggcgtcggcctg < 2:8318594‑M2/140‑26 (MQ=255) tAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctg < 1:1878348‑M2/140‑26 (MQ=255) tAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctg < 2:5111135‑M2/140‑26 (MQ=255) tAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctg < 1:4040393‑M2/140‑26 (MQ=255) tAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctg > 1:7061444‑M2/1‑115 (MQ=255) tAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctg < 1:1193794‑M2/140‑26 (MQ=255) tAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑‑GGGGGGGCACCATTGGCGTCGGCCTg > 1:1601648/1‑140 (MQ=255) aCGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtt < 1:2258844‑M2/140‑28 (MQ=255) aCGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCC‑‑GGGGGGGCACCATTGGCGTCGGCCGGtt > 1:8887165/1‑140 (MQ=255) gATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgttta < 1:2152236‑M2/140‑30 (MQ=255) tAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatg < 1:6699070‑M2/140‑32 (MQ=255) aaCCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgg < 1:3939690‑M2/140‑33 (MQ=255) ccGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggg < 1:2347069‑M2/140‑35 (MQ=255) ccGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggg < 1:5047459‑M2/140‑35 (MQ=255) ccGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATAACGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggg > 2:1399986‑M2/1‑106 (MQ=255) ggTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggc < 1:2187117‑M2/140‑37 (MQ=255) ggTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggc > 2:8881437‑M2/1‑104 (MQ=255) ggTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggc < 2:7725176‑M2/140‑37 (MQ=255) tAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccg < 2:1922166‑M2/140‑39 (MQ=255) tAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccg < 1:2830632‑M2/140‑39 (MQ=255) aaCACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATCACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGTACTCATCGCCC‑‑GGGGGGGCACCATTGGCGTCGGCCTGTTTATGGGGgccgc > 2:7917891/1‑140 (MQ=255) aaCACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgc > 1:2641993‑M2/1‑101 (MQ=255) aaCACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgc < 2:4624425‑M2/140‑40 (MQ=255) cacCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgcca > 1:4763276‑M2/1‑99 (MQ=255) ccGGAAAGCATGCAAACACAACCCGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagt > 1:8631932‑M2/1‑97 (MQ=255) ggAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtac < 2:2595654‑M2/140‑46 (MQ=255) ggAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtac < 1:3642557‑M2/140‑46 (MQ=255) cATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaa > 2:1691202‑M2/1‑89 (MQ=255) aTGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaa > 2:5321958‑M2/1‑88 (MQ=255) aTGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaa < 1:3194178‑M2/140‑53 (MQ=255) tGCAAACACAACACGAGGAGTTATGGCAGATCACAAACCAGAGCTACAGCGAGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtgtatgggggccgccagtaccctgaaat < 2:7213292‑M2/140‑54 (MQ=255) gCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatg < 1:9040064‑M2/140‑55 (MQ=255) gCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatg < 2:9067241‑M2/140‑55 (MQ=255) aacacaacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggc > 1:421011‑M2/1‑83 (MQ=255) caacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggccggtttatgggggccgccagtaccctgaaatgggccggg < 1:2446200‑M2/140‑62 (MQ=255) aacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggc > 2:8558781‑M2/1‑78 (MQ=255) aacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggc > 2:1238867‑M2/1‑78 (MQ=255) aacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggc > 1:5863126‑M2/1‑78 (MQ=255) aacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggc > 1:4624425‑M2/1‑78 (MQ=255) aacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggc > 1:5244927‑M2/1‑78 (MQ=255) aacacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccggac > 2:4244096‑M2/1‑78 (MQ=255) acacGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggcc < 1:6383117‑M2/140‑64 (MQ=255) ccgAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccat > 1:3280150‑M2/2‑75 (MQ=255) cGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatc < 2:5681079‑M2/140‑67 (MQ=255) gAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatcc < 1:7599223‑M2/140‑68 (MQ=255) gAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatcc > 1:7386560‑M2/1‑73 (MQ=255) aGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccg > 1:549929‑M2/1‑72 (MQ=255) gATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcttcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatcagta < 2:3876581‑M2/140‑71 (MQ=255) ttATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattg > 2:4909992‑M2/1‑67 (MQ=255) tATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgt > 2:2142887‑M2/1‑66 (MQ=255) tATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgt > 1:5385907‑M2/1‑66 (MQ=255) tATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgt > 2:6137985‑M2/1‑66 (MQ=255) tATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgt > 2:6851965‑M2/1‑66 (MQ=255) tATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgt > 1:2079581‑M2/1‑66 (MQ=255) tGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttg > 1:1104923‑M2/1‑64 (MQ=255) cAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcc > 2:9235578‑M2/1‑61 (MQ=255) aGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGATCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcct > 1:781608‑M2/1‑60 (MQ=255) aCCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtagtgttggcctatatcatcg < 2:6025564‑M2/140‑90 (MQ=255) agCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccggg > 1:4390736‑M2/1‑46 (MQ=255) agCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccggg < 2:576190‑M2/140‑95 (MQ=255) aGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttc > 2:7458338‑M2/1‑40 (MQ=255) tGGTCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtgtatgggggccgccagtaccctgacatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtct < 2:8717366‑M2/140‑105 (MQ=255) tGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtct < 2:2914705‑M2/140‑105 (MQ=255) tGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtct < 2:7164582‑M2/140‑105 (MQ=255) tGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggg < 1:6935867‑M2/70‑35 (MQ=255) ggCTGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtcttt < 1:1038361‑M2/140‑107 (MQ=255) tGGAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttc < 1:3834912‑M2/140‑110 (MQ=255) gAAGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcat < 1:8763053‑M2/140‑112 (MQ=255) aaGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatc > 1:1505655‑M2/1‑28 (MQ=255) aaGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatc < 2:1825651‑M2/140‑113 (MQ=255) aaGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatc < 1:1778427‑M2/140‑113 (MQ=255) aaGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatc < 1:7159482‑M2/140‑113 (MQ=255) aGCTCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatca > 1:5690118‑M2/1‑27 (MQ=255) tCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatcatgc < 2:1044249‑M2/140‑117 (MQ=255) tCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctggtcgtctttttcatcatgc < 1:8164228‑M2/140‑117 (MQ=255) tCGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgcagggctgttcgtctttttcatcatgc < 2:6321967‑M2/140‑117 (MQ=255) cGACATATCGAACTCATCTCC‑‑GTGGGGGGCACCATTGGCGTCGGCCTGGTTATGGGGGCCGCCAGTACCCTGACATGGGCCGGGCCATCCGTAGGGTGGGCCTATTTCATCGCCGGGCTGTGCGTCTGGTTCATCATGCg > 2:3525919/1‑140 (MQ=255) cGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatcatgcg < 2:3009011‑M2/140‑118 (MQ=255) cGACATATCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatcatgcg < 2:1512272‑M2/140‑118 (MQ=255) atCGAACTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatcatgcgttcaat > 1:9354883‑M2/1‑17 (MQ=255) acacATCGCCCTggggggcaccattggcgtcggcctgttgatgggggccgccagtaccctgaaattggccgggccatccgtattgttggcctagatcatcgccgggctgttcgtctttttcatcatgcgttcaatgggcg > 2:208237‑M2/1‑12 (MQ=255) cTCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatcatgcgttcaatgggcga > 2:4003030‑M2/1‑11 (MQ=255) tCATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatcatgcgttcaatgggcgaa > 1:2605478‑M2/1‑10 (MQ=255) cATCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatcatgcgttcaatgggcgaaa < 1:1353314‑M2/140‑132 (MQ=255) ttcGCCCTggggggcaccattggcgtcggcctgtttttgggggccgccagtaccctgaaatgggccgggccctccgtattgttggcctatatcagcgccgggctggtcgtctttttcatcaggcgttcaatgggcgaaag < 2:3091080‑M2/139‑133 (MQ=255) aTCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatcatgcgttcaatgggcgaaat < 2:3216475‑M2/140‑133 (MQ=255) aTCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtaatgttggcctatatcatcgccgggctgttcgtctttttcatcatgcgttcaatgggcgaact < 2:3701351‑M2/140‑133 (MQ=255) tCGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtctttttcatcatgcgttcaatgggcgaaatg < 1:8052240‑M2/140‑134 (MQ=255) cGCCCTggggggcaccattggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcatcgccgggctgttcgtgtttttcttcatgcgttcaatgggcgaaatgt < 2:2385017‑M2/140‑135 (MQ=255) cGCCCTggggggcaccaatggcgtcggcctgtttatgggggccgccagtaccctgaaatgggccgggccatccgtattgttggcctatatcaacgccgggctgttcgtctttttcatcatgcgttcaatgggcgaaatgt < 1:6205068‑M2/140‑135 (MQ=255) | ACATTTGCAACACTCGATGTACCCATAACGATAACCGGTAACACCGGAAAGCATGCAAACACAACACGAGGATTTATGGCAGATAACAAACCAGAGCTACAGCGTGGGCTGGAAGCTCGACATATCGAACTCATCGCCCTGGGGGGGGCACCATTGGCGTCGGCCTGTTTATGGGGGCCGCCAGTACCCTGAAATGGGCCGGGCCATCCGTATTGTTGGCCTATATCATCGCCGGGCTGTTCGTCTTTTTCATCATGCGTTCAATGGGCGAAAT > NZ_CP025268/3982732‑3983005 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |