| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,621,385 | 0 | C | T | 50.2% | 315.8 / inf | 1404 | A414V (GCG→GTG) | deoA | thymidine phosphorylase |
| Reads supporting (aligned to +/- strand): ref base C (496/199); new base T (503/199); total (1004/400) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.72e-01 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 1442 total aligned reads displayed.
GCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGCATT > NZ_CP025268/4621247‑4621523 | gcggACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAgcggcg < 2:5488600/140‑1 (MQ=255) gACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaa > 2:5766696‑M2/1‑138 (MQ=255) ccatcgattacagcgtcggctttactgatatggcgcgtctgtgcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTaaa < 1:3664156‑M1/23‑1 (MQ=255) ccatcgattacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTaaa < 1:2509949‑M1/23‑1 (MQ=255) cATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcg > 2:8228590‑M2/1‑126 (MQ=255) tcgtttaccgcgtcggctttactgatatggcgcgtctgggcgaccaggttgacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACtt > 2:925311‑M1/115‑140 (MQ=255) tcgattacagcgtcggctttactgatatggcgcgtatgggagaccaggtagacggtcagcgtccgatggcggttatacaagcgaaagacgaaatcaactggcaggaagcggagaAAGCGGTGTAAGCGGCAATTAAACtt < 2:7828377‑M1/26‑1 (MQ=255) attacagcgtcggctttacggatatggcgcgtcggggcgccctggtagacggtccgcggccgcgggcgggtagccacgcgcaagacgaaaacaactggcaggaagcggcgaACGCGGTGAAAGCGGCAATTAAACTTgcg < 2:3734376‑M1/29‑2 (MQ=255) ttacagcgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCg < 1:873410‑M1/30‑1 (MQ=255) cgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAg < 1:900999‑M1/36‑1 (MQ=255) cgtcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAg > 1:6129911‑M1/105‑140 (MQ=255) gATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgc > 2:2216097‑M2/1‑112 (MQ=255) tcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCa < 2:485246‑M1/38‑1 (MQ=255) tcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCa < 2:6195525‑M1/38‑1 (MQ=255) tcggctttactgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCa < 1:5779718‑M1/38‑1 (MQ=255) aGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataa < 1:8131422‑M2/140‑35 (MQ=255) aGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataa > 1:6190629‑M2/1‑106 (MQ=255) cGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaag > 2:7283112‑M2/1‑104 (MQ=255) cGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaag > 1:5474334‑M2/1‑104 (MQ=255) actgatatggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAg < 1:1334037‑M1/46‑1 (MQ=255) tCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagca < 1:295993‑M2/140‑39 (MQ=255) ggCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcacc < 2:8464018‑M2/140‑41 (MQ=255) atggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACAcc < 2:6115103‑M1/52‑1 (MQ=255) ttACTGCTACGGCGCCTCTGCGCTCCCAGGAAGACCGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAacgcggtgaaagcggcaattaaacttgccgataaagcaccggaa > 2:6452102‑M2/1‑96 (MQ=255) ttACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaa > 1:4816293‑M2/1‑96 (MQ=255) ggcgcgtctgggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCaa > 1:1039543‑M1/87‑140 (MQ=255) tatGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacac < 1:1515815‑M2/140‑52 (MQ=255) tatGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacac > 2:1525190‑M2/1‑89 (MQ=255) tatGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacac > 1:1743268‑M2/1‑89 (MQ=255) atGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacacc < 1:4067230‑M2/140‑53 (MQ=255) ggCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaa > 1:636256‑M2/1‑86 (MQ=255) ggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCg < 1:4298466‑M1/64‑1 (MQ=255) ggcgaccaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCg > 1:7266914‑M1/77‑140 (MQ=255) accaggtagacggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGt < 1:3089825‑M1/68‑1 (MQ=255) tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtct < 2:8105265‑M2/140‑61 (MQ=255) tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtct < 2:2635304‑M2/140‑61 (MQ=255) tCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtct < 1:3824350‑M2/140‑61 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCTGCACTTAAACTTGCCGATAAAGCACCGTAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 2:200921‑M1/64‑140 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 2:4117239‑M1/64‑140 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 1:7060659‑M1/64‑140 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 1:5861162‑M1/64‑140 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 1:5195774‑M1/64‑140 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 1:4152299‑M1/64‑140 (MQ=255) acggtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGaa > 2:7681629‑M1/64‑140 (MQ=255) acggtcagcgtacgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCATTTAAACTTGCCGATAAAGCACCGGAAAGCACACCTACTGTATATCGCAGTATCAGCGaa > 1:208375‑M1/64‑140 (MQ=255) ccAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgta < 2:1365564‑M2/140‑70 (MQ=255) cAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtat > 1:7380746‑M2/1‑70 (MQ=255) gtcagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATaa > 2:7121642‑M1/61‑140 (MQ=255) gtcagcgtccgctggcggtgatccacgcgaaagacgacaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACGGTCTATCGCCGTATCAGCGAATaa > 1:1922196‑M1/61‑140 (MQ=255) ggTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGTCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatca > 2:1798660‑M2/1‑68 (MQ=255) ggTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatca > 2:8726974‑M2/1‑68 (MQ=255) ggTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatca > 1:2883234‑M2/1‑68 (MQ=255) ggTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatca > 2:3369857‑M2/1‑68 (MQ=255) ggTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatca > 1:8279284‑M2/1‑68 (MQ=255) cagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg > 1:2268710‑M1/59‑140 (MQ=255) cagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg > 2:4959714‑M1/59‑140 (MQ=255) cagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg > 2:5110894‑M1/59‑140 (MQ=255) cagcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACg > 1:6779972‑M1/59‑140 (MQ=255) agcgtccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACgg < 1:7922947‑M1/83‑1 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 2:4521777‑M2/1‑63 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 2:466345‑M2/1‑63 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 2:3574908‑M2/1‑63 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:1691572‑M2/1‑63 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:4416398‑M2/1‑63 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:4706472‑M2/1‑63 (MQ=255) aCGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACGGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaa > 1:7628443‑M2/1‑63 (MQ=255) tccgctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGtata > 1:5060849‑M1/54‑140 (MQ=255) ctggcggttatccacgcgaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATAatga < 2:3208743‑M1/91‑1 (MQ=255) cAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacg > 1:3439342‑M2/1‑58 (MQ=255) cAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacg > 2:8932142‑M2/1‑58 (MQ=255) tCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtata > 2:233571‑M2/1‑53 (MQ=255) tGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgat > 1:8490921‑M2/1‑48 (MQ=255) gaaagacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGACTAACGGTATACTGATCTGATCATTTAAAttt < 2:4215507‑M1/108‑1 (MQ=255) tgacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGaa > 1:9370400‑M1/30‑140 (MQ=255) agacgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCTGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGaa > 1:3596221‑M1/30‑140 (MQ=255) acgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGc > 2:6962270‑M1/28‑140 (MQ=255) cgcgAAAGACGAAAACAACTGGCAGGAAGCGGCGAcagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgagctgatcatttaaa < 2:3076737‑M2/140‑106 (MQ=255) cgacaacaactggcaggaagcggcgaAAGCGGTGAAATCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCa > 2:2491504‑M1/27‑140 (MQ=255) cgaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCa > 1:7778853‑M1/27‑140 (MQ=255) gaaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCAc > 2:6850815‑M1/26‑140 (MQ=255) aaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACt > 1:970224‑M1/25‑140 (MQ=255) aaaacaactggcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACt > 2:6575458‑M1/25‑140 (MQ=255) aCGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagc > 1:8830039‑M2/1‑27 (MQ=255) aCGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagc > 1:2633029‑M2/1‑27 (MQ=255) aCGAAAACAACTGGCAGGAAGCGGCGAaagcggtgaaagcggaaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagc > 2:1203531‑M2/1‑27 (MQ=255) aaaaCAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcact > 2:6706488‑M2/1‑24 (MQ=255) aaaaCAACTGGCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcact > 2:7491826‑M2/1‑24 (MQ=255) aaaaCAACTGGCAGGAAGCGACGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcact > 1:329113‑M2/1‑24 (MQ=255) gcaggaagcggcgaAAGCGGTGAAAGCTGCAATTAAACTTGCCGATAAAGCACCGGAAAGAACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGgag < 1:6674454‑M1/126‑1 (MQ=255) gcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGgag > 1:7443224‑M1/15‑140 (MQ=255) gcaggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGgag > 2:429147‑M1/15‑140 (MQ=255) caggaagcggcgaAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGgaga < 1:4598558‑M1/127‑1 (MQ=255) gCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggag > 1:912536‑M2/1‑14 (MQ=255) gCAGGAAGCGGCGAaagcggtgaaagcggcaattaaacttgccgagaaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggag > 2:5835289‑M2/1‑14 (MQ=255) gCAGGAAGAGGCGAaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggag > 2:9358298‑M2/1‑14 (MQ=255) aAAGCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACg > 2:2900294‑M1/2‑140 (MQ=255) aagcggcgaaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggagaacat > 2:5650428‑M2/1‑9 (MQ=255) GCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGc > 1:8635795‑M1/1‑140 (MQ=255) GCGGTGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGc > 1:4640589‑M1/1‑140 (MQ=255) gcgaaagcggtgaaagcggcaattaaacttgccgataaagcaccggaaagcacaccaactgtctatcgccgtatcagcgaataacggtatactgatctgatcatttaaatttgaagcactgagtacggagaacatatgaa < 2:3963050‑M2/140‑137 (MQ=255) | GCGGACGCCGTCAGGCATCTGACACCATCGATTACAGCGTCGGCTTTACTGATATGGCGCGTCTGGGCGACCAGGTAGACGGTCAGCGTCCGCTGGCGGTTATCCACGCGAAAGACGAAAACAACTGGCAGGAAGCGGCGAAAGCGGCAATTAAACTTGCCGATAAAGCACCGGAAAGCACACCAACTGTCTATCGCCGTATCAGCGAATAACGGTATACTGATCTGATCATTTAAATTTGAAGCACTGAGTACGGAGAACATATGAAACGTGCATT > NZ_CP025268/4621247‑4621523 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |