| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 945,089 | A→G | *204* (TAA→TAG) | lolA → | outer membrane lipoprotein chaperone LolA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 945,089 | 0 | A | G | 99.6% | 1813.2 / NA | 520 | *204* (TAA→TAG) | lolA | outer membrane lipoprotein chaperone LolA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (271/246); minor base T (2/0); total (274/246) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.00e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 530 total aligned reads displayed.
CATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAAAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCG > NZ_CP025268/944952‑945225 | cATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTagag > 1:5083307/1‑140 (MQ=255) cAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCa > 1:8054948/1‑140 (MQ=255) tttAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCt > 1:1941075/1‑140 (MQ=255) ttAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtg < 1:7504313/140‑1 (MQ=255) ttAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtg < 1:2212787/140‑1 (MQ=255) tAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGTCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtga > 2:5573174/1‑140 (MQ=255) tAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtga < 2:3751034/140‑1 (MQ=255) aGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtgag > 2:3092897/1‑140 (MQ=255) gcgcGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtgagt < 1:2046190/140‑1 (MQ=255) cgcgGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtgagtg > 2:3418351/1‑140 (MQ=255) cgcgGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtgagtg > 2:5413602/1‑140 (MQ=255) cgGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCtgagtgag < 2:2709572/140‑1 (MQ=255) tGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCaa > 1:2442941/1‑140 (MQ=255) tGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCaa > 2:411808/1‑140 (MQ=255) tGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCaa > 2:9296108/1‑140 (MQ=255) gACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTcag > 2:4957624/1‑138 (MQ=255) gACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGc > 2:8122474/1‑140 (MQ=255) aCGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCt < 1:7032409/140‑1 (MQ=255) aTCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGa > 1:8896894/1‑140 (MQ=255) tCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTCGATGATCAACGTAAGGAGAGGCACCTGAGTGAGCAATCTGTCGCTCgcg > 2:6540711/1‑138 (MQ=255) tCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGAt > 1:6092658/1‑140 (MQ=255) aGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTACGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGAttt > 2:737643/1‑140 (MQ=255) gcgcAGCAGTTATCAACTGAAATCCCTGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGAtttt < 1:6241355/140‑1 (MQ=255) gcgcAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGAtttt < 1:4007839/140‑1 (MQ=255) gcgcAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGAtttt < 1:4204817/140‑1 (MQ=255) gcagTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGa < 1:4993876/140‑1 (MQ=255) gcagTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGa < 2:6052327/140‑1 (MQ=255) cagTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGat > 1:7711290/1‑140 (MQ=255) cagTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTGTT‑CGGat > 1:8243123/1‑140 (MQ=255) gTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGTGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGataa < 1:6445816/140‑1 (MQ=255) gTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGataa < 1:90967/140‑1 (MQ=255) gTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGataa < 2:4662731/140‑1 (MQ=255) ttATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTTAGTGATCAATCTGTCGCTCGATTTTT‑CGGataat > 2:4303027/1‑140 (MQ=255) ttATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGataat < 2:8994347/140‑1 (MQ=255) tATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGataata < 1:5701017/140‑1 (MQ=255) aTCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATAc > 2:7622435/1‑140 (MQ=255) aTCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCGCGATTTTT‑CGGATAATAc > 1:4755818/1‑140 (MQ=255) tCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACt > 1:1165733/1‑140 (MQ=255) aCTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACtttt < 1:634388/140‑1 (MQ=255) cTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTc > 1:4461412/1‑140 (MQ=255) tGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCa > 1:3240567/1‑140 (MQ=255) tGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCa < 1:4858447/140‑1 (MQ=255) aaaTCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAAc > 1:7900808/1‑140 (MQ=255) aaaTCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAAc > 2:4777772/1‑140 (MQ=255) cccAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGGCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACctct < 2:1745285/140‑1 (MQ=255) cAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTgg < 2:7962892/140‑1 (MQ=255) aGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGc < 2:278290/140‑1 (MQ=255) aGCAAAATGGGGCGGTGGATGCGGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGATGCACCTGAGTGAGCACTCTGTCGCTCGATTGTT‑CGGATAATACTTTTCAACCTCTGGc > 2:7027928/1‑140 (MQ=255) gggCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTAt < 2:1069384/140‑1 (MQ=255) tgGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGcc > 1:1367418/1‑140 (MQ=255) tgGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGcc > 1:3762307/1‑140 (MQ=255) tgGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGcc > 1:8117987/1‑140 (MQ=255) tgGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGA‑TTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCa > 2:1972447/1‑140 (MQ=255) aTGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGa < 2:716664/140‑1 (MQ=255) aTGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGa < 1:5583821/140‑1 (MQ=255) aGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAAt > 1:9295261/1‑140 (MQ=255) aGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAAt > 1:859491/1‑140 (MQ=255) cGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAAttt > 1:1751547/1‑140 (MQ=255) gAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTa > 2:6712577/1‑140 (MQ=255) gAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTa < 2:6272670/140‑1 (MQ=255) gAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTa > 1:3818617/1‑140 (MQ=255) gAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTa < 2:7898719/140‑1 (MQ=255) taaTTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAAAGTAAGTAGATGCACCTGAGTGATCAATCTGTCGCTCGATTTTTCCGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTa < 2:1321747/139‑1 (MQ=255) aaaTTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAg < 2:2150029/140‑1 (MQ=255) aaaTTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAg < 2:2528196/140‑1 (MQ=255) aTTTACCTTCGCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGca < 2:9355632/140‑1 (MQ=255) aTTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CTGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGca < 2:3190805/140‑1 (MQ=255) aTTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCATAAAATTTAGca < 1:5364803/140‑1 (MQ=255) aTTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGca < 1:4280266/140‑1 (MQ=255) aTTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGca < 1:9397571/140‑1 (MQ=255) aTTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGca < 1:436492/140‑1 (MQ=255) aTTTACCTTCACCCCGCCGCAAGGCGTCACGGAAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTGCAACCTCTGGCCGCGCGTATGCGGCCAGAAACTTTAGca < 1:1570264/140‑1 (MQ=255) ttACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTAGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGcaca < 1:8760121/140‑1 (MQ=255) aCCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGt > 2:14539/1‑140 (MQ=255) ttCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGtata < 2:1201854/140‑1 (MQ=255) ttCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGtata < 2:8460613/140‑1 (MQ=255) cACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATc > 1:7178545/1‑140 (MQ=255) aCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCg < 1:14539/140‑1 (MQ=255) aCCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCg > 2:3985528/1‑140 (MQ=255) ccgccgCAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATGTAGCACTGGATATCGGcc > 2:2336999/1‑140 (MQ=255) gccgcAAGGCGTCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAg < 1:2873059/140‑1 (MQ=255) ccgcAAGGCGTCACTGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCTCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAAATTAGCACAGTATATCGGCCAGc < 2:8586993/140‑1 (MQ=255) tCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTgct > 2:515949/1‑140 (MQ=255) tCACGGTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTgct > 1:7304512/1‑140 (MQ=255) gTAGATGATCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTgctggctg < 1:3399784/140‑1 (MQ=255) ggtgatCAACGTAAGTAGAGGCACCGGTGTGAGCAATCTGTCGCTAGATTTTT‑CGGCTAATACTTTTCCACCTCTGGCCGCGCGTATGCGGCCCGAAGTGTTGGCACAGTCTATCGGCCAGCAACAGTTGGTGGCTGCgg > 2:6928154/3‑140 (MQ=255) gatgatCAACGTACGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATGTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCgg > 1:3125493/1‑140 (MQ=255) gatgatCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCCCAGTATATCGGCCAGCCACATTTGCTGGCTGCgg > 1:5255343/1‑140 (MQ=255) gatgatCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCgg > 2:5835046/1‑140 (MQ=255) gatCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGa < 1:6817652/140‑1 (MQ=255) gatCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGa < 2:7808802/140‑1 (MQ=255) tCAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAg > 1:2524911/1‑140 (MQ=255) cAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGc > 1:5824485/1‑140 (MQ=255) cAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGc > 1:2726591/1‑140 (MQ=255) cAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGc > 1:3628675/1‑140 (MQ=255) cAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGc > 1:1012573/1‑140 (MQ=255) cAACGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGc > 2:161275/1‑140 (MQ=255) aCGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCg > 1:848538/1‑140 (MQ=255) aCGTAAGTAGAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCg > 2:4518658/1‑140 (MQ=255) agtagAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGGATGCGGCCAGAACATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGcc > 2:8722927/1‑140 (MQ=255) | CATCAGTTTAGCGCGGTGGAGCAGGACGATCAGCGCAGCAGTTATCAACTGAAATCCCAGCAAAATGGGGCTGTGGATGCAGCGAAATTTACCTTCACCCCGCCGCAAGGCGTCACGGTAGATGATCAACGTAAGTAAAGGCACCTGAGTGAGCAATCTGTCGCTCGATTTTT‑CGGATAATACTTTTCAACCTCTGGCCGCGCGTATGCGGCCAGAAAATTTAGCACAGTATATCGGCCAGCAACATTTGCTGGCTGCGGGGAAGCCGTTGCCG > NZ_CP025268/944952‑945225 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |