| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,277,472 | A→G | I132T (ATC→ACC) | chaA ← | sodium‑potassium/proton antiporter ChaA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,277,472 | 0 | A | G | 99.5% | 1927.4 / NA | 552 | I132T (ATC→ACC) | chaA | sodium‑potassium/proton antiporter ChaA |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (250/299); minor base C (1/2); total (251/301) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 552 total aligned reads displayed.
ATTAATGCTACCAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGATGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCGGTTGCCATTAAAGCTGAAATCAAACT > NZ_CP025268/1277337‑1277608 | aTTAATGCTACCAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGc < 2:7158770/140‑1 (MQ=255)aTTAATGCTACCAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGc < 1:2171339/140‑1 (MQ=255)aTTAATGCTACCAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGc < 1:7000327/140‑1 (MQ=255) tACCAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTAc < 2:7839440/140‑1 (MQ=255) tACCAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTAc > 1:4164371/1‑140 (MQ=255) ccAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGa > 1:8383738/1‑140 (MQ=255) ccAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGa < 1:7176652/140‑1 (MQ=255) cAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGAc < 2:6574254/140‑1 (MQ=255) cAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGAc < 1:8930196/140‑1 (MQ=255) cAGTAACGCCTGACCGGTTGAAAAATTCGCCGCACGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCTC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGAc < 2:8698414/140‑1 (MQ=255) gTAACGCCTGACCGGTAGCAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCg < 1:6593404/140‑1 (MQ=255) aaCGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGANTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGcc > 1:6273564/1‑140 (MQ=255) aCGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGccc < 1:5523231/140‑1 (MQ=255) aCGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGccc < 2:2565612/140‑1 (MQ=255) aCGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGccc < 1:869553/140‑1 (MQ=255) cTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCcaaca < 1:1230470/140‑1 (MQ=255) cTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCcaaca < 1:7284089/140‑1 (MQ=255) cTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCcaaca > 1:8451230/1‑140 (MQ=255) cTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCcaaca > 2:728236/1‑140 (MQ=255) tGACCGGTTGAAAAATTCGCCGCAGGAAGAGCCATTGGAAATACCAGTACGATTATCGACAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCcaacaa < 1:5716782/140‑1 (MQ=255) gACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACaat > 1:7445591/1‑140 (MQ=255) gACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACaat > 2:2808205/1‑140 (MQ=255) aCCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACATCGC‑AATTAAATACTGCTTGATACAAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACaata > 1:5089381/1‑140 (MQ=255) aCCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACaata > 1:9314870/1‑140 (MQ=255) ccGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACaataa > 1:8505077/1‑140 (MQ=255) tGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGaaa > 2:5694360/1‑140 (MQ=255) ttCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAAc < 1:4743893/140‑1 (MQ=255) ttCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAAc < 2:5235001/140‑1 (MQ=255) gtCGCCGAAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATAGATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAAc < 2:8396184/139‑1 (MQ=255) cgccgcAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCa > 2:4872870/1‑140 (MQ=255) cgccgcAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCa > 2:64518/1‑140 (MQ=255) ccgcAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGc < 1:9401095/140‑1 (MQ=255) gcaggcagAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGccc < 2:5042773/140‑1 (MQ=255) aggcagAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCAc < 1:7953529/140‑1 (MQ=255) aggcagAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCAc < 2:3630518/140‑1 (MQ=255) agagCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGt < 1:671748/140‑1 (MQ=255) agagCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGt < 1:3741085/140‑1 (MQ=255) agagCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGt < 1:8031894/140‑1 (MQ=255) agCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTaa < 1:3629025/140‑1 (MQ=255) agCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTaa < 1:1553220/140‑1 (MQ=255) agCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTaa < 1:3338190/140‑1 (MQ=255) ggAATTACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATATTGAAAAGCCAACCAGCCGACCGGTAACAATCAt < 2:1455375/140‑1 (MQ=255) ggAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCAt < 1:5395825/140‑1 (MQ=255) ggAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCAt < 2:2250909/140‑1 (MQ=255) ggAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCAt < 2:4191768/140‑1 (MQ=255) aaaTACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATaa < 1:4952167/140‑1 (MQ=255) aaaTACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATaa < 2:9017918/140‑1 (MQ=255) aaaTACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATaa < 1:4675569/140‑1 (MQ=255) aaaTACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATaa < 1:4548586/140‑1 (MQ=255) aaaGACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATaa < 2:8177841/140‑1 (MQ=255) aaTACCAGTACGATTATCGCCAGGGGGAACAGCGCAAATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATaa < 1:578200/140‑1 (MQ=255) tACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGa < 1:2901981/140‑1 (MQ=255) tACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGa > 1:1310149/1‑140 (MQ=255) tACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGa < 2:1056438/140‑1 (MQ=255) tACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGa > 1:3560221/1‑140 (MQ=255) aCCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGAt > 2:1796928/1‑140 (MQ=255) gTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGaa < 1:8146857/140‑1 (MQ=255) tACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAAt > 1:1030529/1‑140 (MQ=255) tACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAAt > 1:1984496/1‑140 (MQ=255) aCGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATa < 2:3916644/140‑1 (MQ=255) aCGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCC‑ACCAGCCCACCGGTAACAATCATAATGATTGAAt > 2:7865995/1‑138 (MQ=255) gATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATaga < 1:3830803/140‑1 (MQ=255) gATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATaga < 1:2720169/140‑1 (MQ=255) gATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATaga < 1:3127580/140‑1 (MQ=255) aTTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATagag > 1:428224/1‑140 (MQ=255) tCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTa < 2:4134221/140‑1 (MQ=255) gCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATc > 2:4531349/1‑140 (MQ=255) ccAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCa < 2:3143716/140‑1 (MQ=255) ggggAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCa > 1:9051140/1‑140 (MQ=255) ggggAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCa > 1:924109/1‑140 (MQ=255) aCAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGc > 2:296275/1‑140 (MQ=255) cAGCGC‑AATTAAAGACTGCTTGATACCAAACAGATGCATATATGGGGTGGCAAACGTACGCCCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCg < 2:3701814/140‑1 (MQ=255) gcgc‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGtt > 2:2430381/1‑140 (MQ=255) cgc‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATagag > 2:9293011/1‑120 (MQ=255) cgc‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTg > 1:525822/1‑140 (MQ=255) cgc‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTg > 1:2290076/1‑140 (MQ=255) cgc‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTg > 1:1591515/1‑140 (MQ=255) ttAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGcgcg > 2:3836509/1‑140 (MQ=255) ttAAATACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGcgcg > 2:1649666/1‑140 (MQ=255) tACTGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTc > 2:3372963/1‑140 (MQ=255) tGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAAt > 1:6095849/1‑103 (MQ=255) tGCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAAt < 2:6095849/103‑1 (MQ=255) gCTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCg > 2:6953438/1‑140 (MQ=255) cTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGa < 2:5434539/95‑1 (MQ=255) cTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCgg > 2:8861363/1‑140 (MQ=255) cTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCgg > 2:6352115/1‑140 (MQ=255) cTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCgg > 2:7703032/1‑140 (MQ=255) cTTGATACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCgg > 2:7502486/1‑140 (MQ=255) agATACCAAACACATACATATATTCGGTGGCAAACTTACGACCGCCCAACAATAATGAACAGCCAACCATCCCACCGGAAACAAACATAATGAGTGAAAAGAGCGTATCACGCATTAGCGATGGCGCGGCGACGCCGCtt < 2:4701384/139‑1 (MQ=255) tACCAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCGGTTGcc > 1:4005835/1‑140 (MQ=255) cAAACAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGAGTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCGGTTGCCAtt > 2:2031584/1‑140 (MQ=255) aaCAGATTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGt > 1:340893/1‑71 (MQ=255) atacATATATTGGGTGGCAAACTTACGACCGCCCAACAAAAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCAGGTTGCCATTAAAGCTg > 2:1535795/4‑140 (MQ=255) aTTCATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGt > 2:5367594/1‑108 (MQ=255) tcctatatTGGGTGGCAAACTAACGACCGCCCAACAATAAAGAAAAGCCAACCAGCCCACCGGTAACAATCAGAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCGGTTGCCATTAAAGCTGaa < 2:6672820/137‑1 (MQ=255) cATATATTGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCGGTTGCCATTAAAGCTGaaa > 1:767167/1‑140 (MQ=255) tGGGTGGCAAACTTACGTCCGCCCCACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGCTTGAATAGTGCGTATCACGCATTAGCGTTGGAGCGGCGTCGCCGGTTGCCAGTAAAGCTGACATCAATCt > 2:951770/1‑140 (MQ=255) tGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCGGTTGCCATTAAAGCTGAAATCAAACt > 2:4416339/1‑140 (MQ=255) tGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCGGTTGCCATTAAAGCTGAAATCAAACt > 1:240813/1‑140 (MQ=255) tGGGTGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCGGTTGCCATTAAAGCTGAAATCAAACt < 2:1158052/140‑1 (MQ=255) | ATTAATGCTACCAGTAACGCCTGACCGGTTGAAAAATTCGCCGCAGGCAGAGCCATTGGAAATACCAGTACGATTATCGCCAGGGGGAACAGCGC‑AATTAAATACTGCTTGATACCAAACAGATTCATATATTGGATGGCAAACTTACGACCGCCCAACAATAATGAAAAGCCAACCAGCCCACCGGTAACAATCATAATGATTGAATAGAGCGTATCACGCATTAGCGTTGGCGCGGCGTCGCCGGTTGCCATTAAAGCTGAAATCAAACT > NZ_CP025268/1277337‑1277608 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |