BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	1,762,540	T→C	pseudogene (1000/1000 nt)	ldtE ←	L,D‑transpeptidase LdtE

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	1,762,540	0	T	C	100.0%	1565.7 / NA	451	pseudogene (1000/1000 nt)	ldtE	L,D‑transpeptidase LdtE
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (240/211); total (240/211)

Only 100 of 451 total aligned reads displayed.

TTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCCCTTGC‑‑‑‑‑TTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAAC  >  NZ_CP025268/1762403‑1762667

ttCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTa                                                                                                                                    >  2:2088290/1‑140 (MQ=255)

  cAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACt                                                                                                                                  >  1:6335987/1‑140 (MQ=255)

     gctgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCg                                                                                                                               <  2:9038704/140‑1 (MQ=255)

       tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAATTTGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTc                                                                                                                             <  1:3435622/140‑1 (MQ=255)

       tgctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTc                                                                                                                             <  2:9256966/140‑1 (MQ=255)

         ctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAc                                                                                                                           >  1:8454375/1‑140 (MQ=255)

         ctAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGACGTTTACCGCTACTGCGTCAc                                                                                                                           >  2:6567173/1‑140 (MQ=255)

          tAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcg                                                                                                                          >  1:976693/1‑140 (MQ=255)

          tAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcg                                                                                                                          >  1:7711275/1‑140 (MQ=255)

            aaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcgcg                                                                                                                        <  1:2432090/140‑1 (MQ=255)

            aaGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCAcgcg                                                                                                                        <  2:2815186/140‑1 (MQ=255)

             aGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTACATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGt                                                                                                                       <  1:4556365/140‑1 (MQ=255)

             aGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGt                                                                                                                       <  1:4186211/140‑1 (MQ=255)

              gATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTa                                                                                                                      <  2:6171319/140‑1 (MQ=255)

              gATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTa                                                                                                                      <  2:6237995/140‑1 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                 <  2:4961321/140‑1 (MQ=255)

                   cGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACata                                                                                                                 <  1:5431629/140‑1 (MQ=255)

                        cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc                                                                                                            >  1:5854556/1‑140 (MQ=255)

                        cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc                                                                                                            >  1:7319637/1‑140 (MQ=255)

                        cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc                                                                                                            <  1:7624013/140‑1 (MQ=255)

                        cTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTccc                                                                                                            <  1:2850318/140‑1 (MQ=255)

                         tCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCt                                                                                                           >  1:379649/1‑140 (MQ=255)

                           gTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTg                                                                                                         <  1:3589863/140‑1 (MQ=255)

                            tGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGc                                                                                                        <  1:5674751/140‑1 (MQ=255)

                             gCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCt                                                                                                       <  1:8015940‑M1/140‑2 (MQ=255)

                              cTAACCAGCGTCTGGACAACATTGATACTATATACCGCAAGTAATATTACCTGTGATGTGAAAAATGTCGCACTTTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtc                                                                                                      <  1:6664784‑M1/140‑3 (MQ=255)

                              cTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtc                                                                                                      <  1:4366204‑M1/140‑3 (MQ=255)

                              cTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtc                                                                                                      <  2:4417636‑M1/140‑3 (MQ=255)

                              cTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtc                                                                                                      <  2:5081654‑M1/140‑3 (MQ=255)

                              cTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGAGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtc                                                                                                      <  2:7625307‑M1/140‑3 (MQ=255)

                                aaCCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctg                                                                                                    <  2:8614156‑M1/140‑5 (MQ=255)

                                     gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttca                                                                                               <  1:6040654‑M1/140‑10 (MQ=255)

                                     gCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttca                                                                                               <  1:1480388‑M1/140‑10 (MQ=255)

                                      cGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcac                                                                                              >  1:9194536‑M1/1‑130 (MQ=255)

                                         cTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACAGTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccat                                                                                           >  1:9247841‑M1/1‑127 (MQ=255)

                                          tGGACAACATGGCTACTAAATCCCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccatt                                                                                          <  2:2026898‑M1/140‑15 (MQ=255)

                                          tGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAATTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccatt                                                                                          >  1:374‑M1/1‑126 (MQ=255)

                                           ggACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAATTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattc                                                                                         >  1:7143839‑M1/1‑125 (MQ=255)

                                               aacaTGGCTACTAAATCCCGCAAGTAATAGTACCTGTGACGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcg                                                                                     <  1:8249281‑M1/140‑20 (MQ=255)

                                                acaTGGCTACTACATACCGCAAGTAAGAGTACCTGTGACGTGAAAAATGGCGCCCAGTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgc                                                                                    <  1:2015806‑M1/140‑21 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAACTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgc                                                                                    <  2:8387812‑M1/140‑21 (MQ=255)

                                                acaTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgc                                                                                    >  1:8371814‑M1/1‑120 (MQ=255)

                                                 caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct                                                                                   <  1:7496656‑M1/140‑22 (MQ=255)

                                                 caTGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgct                                                                                   >  2:1687544‑M1/1‑119 (MQ=255)

                                                   tGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TATTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGAGTAACATATTCCCTTGCtctggttcaccattctgcgctga                                                                                 <  1:4861348‑M1/140‑24 (MQ=255)

                                                    ggCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgac                                                                                >  1:2500822‑M1/1‑116 (MQ=255)

                                                      ctactaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactc                                                                              >  2:3267767‑M1/1‑114 (MQ=255)

                                                       tactaAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactct                                                                             >  1:8873246‑M1/1‑113 (MQ=255)

                                                            aaTACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactga                                                                        >  1:501925‑M1/1‑108 (MQ=255)

                                                                 cGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcg                                                                   >  1:6126161‑M1/1‑103 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca                                                                 >  1:6484378‑M1/1‑101 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca                                                                 >  2:2397755‑M1/1‑101 (MQ=255)

                                                                   cAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgca                                                                 >  2:5297576‑M1/1‑101 (MQ=255)

                                                                      gTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattg                                                              >  1:1087397‑M1/1‑98 (MQ=255)

                                                                      gTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattg                                                              <  1:8605188‑M1/140‑43 (MQ=255)

                                                                        aaTAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgct                                                            <  1:4033183‑M1/140‑45 (MQ=255)

                                                                           aGTACCTGTGAAGTGAAAAATGGCGCACCTTGTGCGCCA‑TTTTTTTTGTCTGCCGGTTACCGCTACTGCGTCACGCGTAACAGATTCCCTTGCTCTGGTTCACCCTTCTGCGCTGACTCTACTGAAGGCGCAtggctggc                                                         >  2:1838637/1‑140 (MQ=255)

                                                                              aCCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgc                                                      >  2:3372410‑M1/1‑90 (MQ=255)

                                                                               ccTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcg                                                     >  1:3812789‑M1/1‑89 (MQ=255)

                                                                                cTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgg                                                    >  1:2753260‑M1/1‑88 (MQ=255)

                                                                                 tgtgAAGTGAAAATTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcagtgctggctgcggg                                                   >  2:5726129‑M1/1‑87 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                   >  2:5465634‑M1/1‑87 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                   <  1:2107826‑M1/140‑54 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                   <  2:2684962‑M1/140‑54 (MQ=255)

                                                                                 tgtgAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                   <  2:2216667‑M1/140‑54 (MQ=255)

                                                                                 tgtgAAGAGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTGACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                   <  2:4263885‑M1/140‑54 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACCTTGTGCGCCA‑TTTTTTTTGTCTGCCGTGTACCGCTACTGCGTCACGCGTAACATCTTCCCTTGCtctggttcaccattctgcgctgactctactgtaggcgcattgctggctgcggga                                                  >  2:2892662‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCATTTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggg                                                   >  2:6673794‑M1/1‑87 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                  >  1:6753661‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                  >  1:8931028‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                  >  2:5647392‑M1/1‑86 (MQ=255)

                                                                                  gtgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTATGCCGTTTACCGCAACTGCGTAACGCGTAAAAAATTCACTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcggga                                                  >  1:3202835‑M1/1‑86 (MQ=255)

                                                                                   tgaagtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcacccttctgcgctgactctactgaaggcgcattgctggctgcgggag                                                 >  2:258183‑M1/1‑85 (MQ=255)

                                                                                      agtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcactgactctactgaaggcgcattgctggctgcgggagttg                                              >  1:1664109‑M1/1‑82 (MQ=255)

                                                                                       gtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgc                                             >  2:8740317‑M1/1‑81 (MQ=255)

                                                                                       gtgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgc                                             >  1:1851454‑M1/1‑81 (MQ=255)

                                                                                        tgaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgct                                            <  2:706651‑M1/140‑61 (MQ=255)

                                                                                         gaaAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctc                                           <  2:3784010‑M1/140‑62 (MQ=255)

                                                                                          aaaaaTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcc                                          >  1:3305561‑M1/1‑78 (MQ=255)

                                                                                           aaaaTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcca                                         <  1:1225145‑M1/140‑64 (MQ=255)

                                                                                           aaaaTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcca                                         <  2:4503685‑M1/140‑64 (MQ=255)

                                                                                            aaaTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATAGTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccac                                        <  2:4865082‑M1/140‑65 (MQ=255)

                                                                                             aaTGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccact                                       >  2:3872921‑M1/1‑75 (MQ=255)

                                                                                                  cgcACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgagtctactgaaggcgcagtgctggctgcgggagttgctccactgctca                                  >  2:9347804‑M1/1‑70 (MQ=255)

                                                                                                     acaTTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccg                               <  1:2255246‑M1/140‑74 (MQ=255)

                                                                                                      caTTGTGCGCCA‑TTTATTTTGTCTGCCGTTTACCGCGACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccga                              <  2:7457168‑M1/140‑75 (MQ=255)

                                                                                                       aTTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaa                             <  2:1385856‑M1/140‑76 (MQ=255)

                                                                                                           tgCGCCA‑TTTTTTTTGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctcctctgctcaccgaaaccg                         >  1:9016080‑M1/1‑61 (MQ=255)

                                                                                                                     ttttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctg                <  2:5901812‑M1/140‑89 (MQ=255)

                                                                                                                       ttttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcc              <  2:3624391‑M1/140‑91 (MQ=255)

                                                                                                                        tttGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgccc             <  2:8412539‑M1/140‑92 (MQ=255)

                                                                                                                          tGTCTGCCGTTTACCGCTTCTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccga           <  2:692735‑M1/140‑94 (MQ=255)

                                                                                                                          tGTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATAGTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccga           <  2:4205673‑M1/140‑94 (MQ=255)

                                                                                                                           gTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgac          >  2:3002540‑M1/1‑46 (MQ=255)

                                                                                                                           gTCTGCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggagcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgac          >  2:8235611‑M1/1‑46 (MQ=255)

                                                                                                                               gCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgata      <  2:114619‑M1/140‑99 (MQ=255)

                                                                                                                               gCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgata      <  2:7854744‑M1/140‑99 (MQ=255)

                                                                                                                               gCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgata      <  1:9352566‑M1/140‑99 (MQ=255)

                                                                                                                               gCCGTTTACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgata      <  1:4417756‑M1/140‑99 (MQ=255)

                                                                                                                                   tttACCGCTACTGCGTCACGCGTAACATATTCCCTTGCtctggttcaccattctgcgctgactctactgaaggcgcattgctggctgcgggagttgctccactgctcaccgaaaccggataccctgcccgacgatacaac  <  1:5315164‑M1/140‑103 (MQ=255)

TTCAGGCTGCTAAAGATGACGCAGCTCGTGCTAACCAGCGTCTGGACAACATGGCTACTAAATACCGCAAGTAATAGTACCTGTGAAGTGAAAAATGGCGCACATTGTGCGCCA‑TTTTTTTTGTCTGCCGTTTACCGTTACTGCGTCACGCGTAACATATTCCCTTGC‑‑‑‑‑TTCACCATTCTGCGCTGACTCTACTGAAGGCGCATTGCTGGCTGCGGGAGTTGCTCCACTGCTCACCGAAACCGGATACCCTGCCCGACGATACAAC  >  NZ_CP025268/1762403‑1762667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`