| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,768,832 | T→C | *123* (TAA→TAG) | sufA ← | Fe‑S cluster assembly scaffold SufA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,768,832 | 0 | T | C | 99.5% | 1461.2 / NA | 421 | *123* (TAA→TAG) | sufA | Fe‑S cluster assembly scaffold SufA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (252/167); minor base A (0/2); total (252/169) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.61e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 422 total aligned reads displayed.
CACCACCTCTTCGTTTATCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CA‑TTGCTTCAGTATTACGAGACATAGTACCGCTTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGCGGGACAA > NZ_CP025268/1768696‑1768968 | caccacCTCTTCGTTTATCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCta < 1:6947342/140‑1 (MQ=255) tctTCGTTTATCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCa < 2:7464336/140‑1 (MQ=255) ttCGTTTATCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCaaa > 1:4480546/1‑140 (MQ=255) tttATCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCtt > 2:3545765/1‑140 (MQ=255) tttATCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCtt > 2:4791185/1‑140 (MQ=255) tATCCCCTTTGCCAGCTCATCGGTGGCTCACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTGTTGACATCGT‑CAGTTGCGTCAGTATTACGAGCCATAGTACCGCCTATACCCCACAGCTGTc > 2:8366647/1‑140 (MQ=255) tATCCCCTTTGCCAGCTCATCGGTGGCTATCTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTAGCTTCAGTATTACTAGACATAGTACCGCCTATACCCCAAAGCTTTc > 2:8899609/1‑140 (MQ=255) tATCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCttta > 1:3470901/1‑139 (MQ=255) aTCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCg > 1:1796220/1‑140 (MQ=255) tCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCgc > 1:1116285/1‑140 (MQ=255) tCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCgc > 2:3964791/1‑140 (MQ=255) cccTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCgcca < 1:7226849/140‑1 (MQ=255) ttGCCAGCTCATCGGTGGCTAACTGGNTGAAGAANCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTCTTACGAGACATAGTACCGCCTATANCCCAAAGCTTTCgccacagc < 1:6215738/140‑1 (MQ=255) ttGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCgccacagc > 2:7817508/1‑140 (MQ=255) ttGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCgccacagc < 2:2752828/140‑1 (MQ=255) ttGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCgccacagc > 2:4577175/1‑140 (MQ=255) ttGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCgccacagc > 2:3414227/1‑140 (MQ=255) ttGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCgccacagc < 1:5626025/140‑1 (MQ=255) ttGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCgccacagc > 1:4281050/1‑140 (MQ=255) cAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATACTTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCACAGCTTTCgccacagccaca < 1:1630754/140‑1 (MQ=255) cTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCAcattc > 2:8221053/1‑140 (MQ=255) tCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACattcattc < 1:4667089/140‑1 (MQ=255) cGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGGCATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCt > 2:5413790/1‑140 (MQ=255) cGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCt < 1:911882/140‑1 (MQ=255) cGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCt > 1:8225815/1‑140 (MQ=255) ggTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTg < 1:426838/140‑1 (MQ=255) ggTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTg < 2:4092602/140‑1 (MQ=255) gTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTgg < 1:5079203/140‑1 (MQ=255) gCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCt > 2:912484/1‑140 (MQ=255) aaCTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTa < 2:566299/140‑1 (MQ=255) aaCTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCAGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTa > 2:5541084/1‑140 (MQ=255) cTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAgg > 1:5475962/1‑140 (MQ=255) ggTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGtt > 1:321624/1‑140 (MQ=255) ggTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGtt > 1:101696/1‑140 (MQ=255) aagaaTCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGa > 2:3776310/1‑140 (MQ=255) aaTCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAAt < 2:6403285/140‑1 (MQ=255) ccTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTg > 1:402022/1‑140 (MQ=255) ccTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTg > 1:6466581/1‑140 (MQ=255) cttcttTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGa < 2:2120416/140‑1 (MQ=255) cttcttTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGa < 2:1088169/140‑1 (MQ=255) cttcttTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGa > 1:176643/1‑140 (MQ=255) ttcttTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGTGTTGTGAAATTTGaa > 2:1349876/1‑140 (MQ=255) tcttTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAat < 1:4195477/140‑1 (MQ=255) tcttTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAat < 1:8423784/140‑1 (MQ=255) tcagtatcATTCTGCGCGCCGCCGGTCCAGGTTTAGACATCGT‑AATTTGCTTCAGTATTACTAGACATATGACCTGATATACCCACACGCTATAGGCACAGCGCCATTCTTTCTGGGGTTTAGGGTTGTGAAATTTGAat < 2:9375109/136‑1 (MQ=255) cttTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAata > 1:5381553/1‑140 (MQ=255) tttATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACAGTCATTCTGGGCTTTAGGGTTGTGAAATTTGAatat < 2:5246766/140‑1 (MQ=255) ttATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATc < 2:3989420/140‑1 (MQ=255) ttATAATTCAGCGGGCCGCCGGTACAGGTTTTGACATCGT‑AAGTTGATTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTTGGCTTTAGGGTTGTGAAATTTGAATATc < 1:5827459/140‑1 (MQ=255) tataATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCt > 2:4142251/1‑140 (MQ=255) tataATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCt > 1:6610885/1‑140 (MQ=255) tataATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCt > 2:243793/1‑140 (MQ=255) taATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGa > 1:1921578/1‑140 (MQ=255) taATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGa > 1:5907259/1‑140 (MQ=255) ttCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATGTGAATATCTGATTa > 2:147137/1‑140 (MQ=255) cAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGCTTAAg > 2:6911597/1‑140 (MQ=255) cAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAg > 1:282491/1‑140 (MQ=255) aGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGt > 2:6698951/1‑140 (MQ=255) aGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTGTAGGGTTGTGAAATTTGAATATCTGATTAAGt > 1:2675925/1‑140 (MQ=255) aGCGGGCCGCAGGTCCAGGTTTTGACATCGTCCG‑GTGCTGCAGTCTTACGAGACCTAGTACCGCCTATACCCCAACGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAgg > 2:859077/1‑139 (MQ=255) cGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAATGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTcc > 2:5869813/1‑140 (MQ=255) cGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTcc > 2:433766/1‑140 (MQ=255) cGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTcc > 1:1351565/1‑140 (MQ=255) cGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTcc > 2:4423826/1‑140 (MQ=255) cGGGCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACAGAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTGAGGGTTGTGAAATTTGAATATCTGATTCAGTcc > 2:119067/1‑140 (MQ=255) ggCCGCCGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTGGAATATCTGATTTAGTCCtt > 1:8489006/1‑140 (MQ=255) gccgccGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTc < 2:7223236/140‑1 (MQ=255) gccgccGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTc < 1:2952321/140‑1 (MQ=255) gccgccGGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTc < 1:3818580/140‑1 (MQ=255) cgccgGTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCac > 2:8643132/1‑140 (MQ=255) gTCCAGGTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCacgaacg < 1:7642093/140‑1 (MQ=255) ggTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATc < 1:2778494/140‑1 (MQ=255) ggTTTTGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATc < 1:2498277/140‑1 (MQ=255) tttGACATCGT‑CAGTTGCTTCAGTATTACGAGACATAGTACCGCCTATCCCCCAAAGCTTGCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTACTTCACGACCGATATCgtc < 2:5976366/140‑3 (MQ=255) cccgtagCTACAGTAGGACGAGACATCGTCCCGCCTATACCCCAAAGCATTCGCCACACCCACATTCATTCTGGGCTTTAGGGTTTTGAAATTAGAATATCTGATTAAGTCCTTCCCGAACGAAAACGACTTCCGTGCCa < 2:7637402/134‑1 (MQ=255) cagttGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCAt < 1:3035247/137‑1 (MQ=255) cagttGCTTCAGTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCAt < 2:4992862/137‑1 (MQ=255) gTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGc < 2:3316407/140‑1 (MQ=255) gTATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGc < 2:7994751/140‑1 (MQ=255) tATTACGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCa < 1:5659154/140‑1 (MQ=255) aCGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCTTCGc > 2:2872192/1‑140 (MQ=255) aCGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGc > 1:1446985/1‑140 (MQ=255) aCGAGACATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGc > 2:8736190/1‑140 (MQ=255) aCGAGACATAGTACCGCCTATACACCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAATTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGc > 2:7128830/1‑140 (MQ=255) aCATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCa < 1:956017/140‑1 (MQ=255) cATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAg > 1:7698168/1‑140 (MQ=255) cATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAg > 2:738286/1‑140 (MQ=255) cATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAg < 1:8749938/140‑1 (MQ=255) cATAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAg > 2:2206182/1‑140 (MQ=255) ctAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGc < 1:6820149/139‑1 (MQ=255) aTAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGc < 1:8331602/140‑1 (MQ=255) tAGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACATCCGTGCCATCAATAAACGGCATCGCTTGCAGCg > 1:8073788/1‑140 (MQ=255) aGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGCgg > 1:7297093/1‑140 (MQ=255) aGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGCgg > 1:2083199/1‑140 (MQ=255) aGTACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGCgg > 1:4910629/1‑140 (MQ=255) tACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGCGGGa > 2:6049704/1‑140 (MQ=255) tACCGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGCGGGa > 2:1683109/1‑140 (MQ=255) ccGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGCGGGACa > 2:958511/1‑140 (MQ=255) cGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGCGGGACaa > 2:5504091/1‑140 (MQ=255) cGCCTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGCGGGACaa > 1:7780841/1‑140 (MQ=255) | CACCACCTCTTCGTTTATCCCCTTTGCCAGCTCATCGGTGGCTAACTGGGTGAAGAATCCTTCTTTATAATTCAGCGGGCCGCCGGTCCAGGTTTTGACATCGT‑CA‑TTGCTTCAGTATTACGAGACATAGTACCGCTTATACCCCAAAGCTTTCGCCACAGCCACATTCATTCTGGGCTTTAGGGTTGTGAAATTTGAATATCTGATTAAGTCCTTCACGAACGAAATCGACTTCCGTGCCATCAATAAACGGCATCGCTTGCAGCGGGACAA > NZ_CP025268/1768696‑1768968 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |