| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,886,276 | A→G | V116A (GTG→GCG) | dmlR ← | DNA‑binding transcriptional regulator DmlR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,886,276 | 0 | A | G | 99.4% | 1668.9 / NA | 480 | V116A (GTG→GCG) | dmlR | DNA‑binding transcriptional regulator DmlR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (203/274); minor base T (1/2); total (204/276) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 480 total aligned reads displayed.
CCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCACTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCTGCGCCCA > NZ_CP025268/1886139‑1886412 | ccAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCt > 1:5638199/1‑140 (MQ=255) tttGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCtaat‑‑a > 2:1843428/1‑140 (MQ=255) cGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGc > 1:10037/1‑140 (MQ=255) gggCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGcc < 1:361226/140‑1 (MQ=255) ggCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCg < 1:3708258/140‑1 (MQ=255) cGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGa < 1:5099214/140‑1 (MQ=255) gATTACATCAGGGGCGATGTCATCGCCACTGCGAATATCGAGATCTACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAg < 2:2685349/140‑1 (MQ=255) aTTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGGTACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGc > 2:549199/1‑140 (MQ=255) aaTTAGGGGCGATGTCATCGACTATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGccacc < 2:6593412/140‑1 (MQ=255) ggggCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTg > 1:6329393/1‑140 (MQ=255) ggggCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTg < 1:7045180/140‑1 (MQ=255) gggCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTgt > 1:4737790/1‑140 (MQ=255) gggCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTgt < 1:9110952/140‑1 (MQ=255) ggCGATGTCCTCGGCAGTGCGAATATCGAGCGCGACACCGTGATTGACCAAATCGACCAGTCGGTCTTCGACATCATAACGTAATTGCAGTTGCGGATACGCCTTCGCCAGGGCTAAT‑‑TAAGCCGGTGCcagcacgggtc > 2:3053326/1‑135 (MQ=255) ggCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTgtc > 2:3916758/1‑140 (MQ=255) ggCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTgtc > 2:4196117/1‑140 (MQ=255) ggCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAC‑‑AACGCCGGAGCCACCACCTgtc > 2:4011721/1‑140 (MQ=255) aTGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTcc > 1:8755993/1‑140 (MQ=255) aTGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTcc > 2:5148622/1‑140 (MQ=255) aTGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTcc > 2:9067823/1‑140 (MQ=255) cactGCGAATATCGAGATCGACACCTTCATTGACCAACTCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAg < 2:7989632/137‑1 (MQ=255) cAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAg < 2:7412942/140‑1 (MQ=255) cAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAg < 2:4089259/140‑1 (MQ=255) aTGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAgct < 2:5645134/140‑1 (MQ=255) tGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAgctg > 2:7653458/1‑140 (MQ=255) tGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAgctg > 1:3526080/1‑140 (MQ=255) gCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAgctgc < 2:3142431/140‑1 (MQ=255) gCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAgctgc < 1:1130202/140‑1 (MQ=255) gCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAgctgc < 1:4551258/140‑1 (MQ=255) aaTATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGa < 1:1884587/140‑1 (MQ=255) aaTATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGa < 1:8426878/140‑1 (MQ=255) aaTATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGa < 2:5407609/140‑1 (MQ=255) atCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGataa > 1:1800752/1‑140 (MQ=255) gagaTCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATAc < 2:8874420/140‑1 (MQ=255) gagaTCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATAc < 2:2376057/140‑1 (MQ=255) gagaTCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATAc < 1:2110804/140‑1 (MQ=255) gagaTCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATAc < 1:2115549/140‑1 (MQ=255) gagaTCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATAc < 1:7532295/140‑1 (MQ=255) gagaTCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATAc < 1:7227194/140‑1 (MQ=255) agaTCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACg > 1:5008340/1‑140 (MQ=255) agaTCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACg > 2:2132987/1‑140 (MQ=255) agaTCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACg > 1:7385580/1‑140 (MQ=255) aTCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACgca > 1:4220511/1‑140 (MQ=255) cGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACgcagc < 1:3826601/140‑1 (MQ=255) cGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACgcagc < 1:1512838/140‑1 (MQ=255) gACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACgcagca < 2:3418018/140‑1 (MQ=255) gACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACgcagca < 1:6394156/140‑1 (MQ=255) acacCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCAt > 1:44574/1‑140 (MQ=255) acacCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCAt > 1:9241870/1‑140 (MQ=255) cacCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATc < 1:6028760/140‑1 (MQ=255) cacCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATc < 1:3038252/140‑1 (MQ=255) ccTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAACGCTGCTGATAATACGCAGCATccc < 2:7285808/140‑1 (MQ=255) cTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATcccc > 1:8875115/1‑140 (MQ=255) tCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTg > 2:4340444/1‑140 (MQ=255) tCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTg > 2:8391686/1‑140 (MQ=255) cATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGc < 2:5319871/140‑1 (MQ=255) aTTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTTCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCGGCg > 1:3137951/1‑140 (MQ=255) aTTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCg < 1:6114309/140‑1 (MQ=255) tGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGc < 1:1254280/140‑1 (MQ=255) aCCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCAc < 2:4759389/140‑1 (MQ=255) cAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCt > 1:652655/1‑140 (MQ=255) cAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCt > 2:2553593/1‑140 (MQ=255) aaaTCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTg > 1:3307744/1‑140 (MQ=255) tCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACg < 1:5277424/140‑1 (MQ=255) cGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGc < 1:4867449/140‑1 (MQ=255) cGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGGTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGc < 2:1625098/140‑1 (MQ=255) aCCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAATAAAACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGc < 1:8303633/140‑1 (MQ=255) ccAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACg > 1:7730159/1‑140 (MQ=255) ccAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACg > 2:3608317/1‑140 (MQ=255) tCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAg > 2:9206020/1‑140 (MQ=255) ggTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGaa < 1:9361539/140‑1 (MQ=255) gTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGaaa > 1:982256/1‑140 (MQ=255) gcTTCCACATCACAACGTAATTCCAGTTGCGGATACGCCGTCGCCAGCGCTACT‑‑CACGCCGGAGCCACCACCTGTCGTCCACACCCAACGCTGCTGATACTACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAg < 1:1649105/139‑1 (MQ=255) ttCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGtt < 2:6818068/140‑1 (MQ=255) ccACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCg < 1:1149120/140‑1 (MQ=255) cacaTCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGt > 2:3775551/1‑140 (MQ=255) acaTCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTc > 1:6751888/1‑140 (MQ=255) cAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑CACGCCGGAGCCCCCACCTGTCGTCCAAAACCAAAGCTGCGGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCcatc > 2:8616269/1‑140 (MQ=255) acaCGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCcatcat < 2:6543674/138‑1 (MQ=255) aaCGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGtt < 2:1146599/129‑1 (MQ=255) aCGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCt < 1:2239231/140‑1 (MQ=255) aCGTAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCt < 1:7915547/140‑1 (MQ=255) tAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGAc < 2:3249340/140‑1 (MQ=255) tAATTCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGAc > 1:2608046/1‑140 (MQ=255) aTTCCAGTTGCGGATACGCATTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCg < 2:7776647/140‑1 (MQ=255) ttCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGa > 1:7678123/1‑140 (MQ=255) ttCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCAACCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGa > 2:6150782/1‑140 (MQ=255) tCCAGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGAc < 2:8101063/140‑1 (MQ=255) aGTTGCGGATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATc < 1:1618198/140‑1 (MQ=255) gATACGCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCaaa > 2:4951115/1‑140 (MQ=255) gCCTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCg > 2:4537094/1‑140 (MQ=255) cTTCGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCt > 1:8167930/1‑140 (MQ=255) cGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCTgcg > 1:2920789/1‑140 (MQ=255) cGCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCTgcg > 2:1423532/1‑140 (MQ=255) gCCAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCTgcgc < 1:5386257/140‑1 (MQ=255) ccAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCTGCGcc < 1:8668118/140‑1 (MQ=255) cAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCTGCGccc < 2:5871275/140‑1 (MQ=255) cAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCTGCGccc < 1:3385081/140‑1 (MQ=255) cAGCGCTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCTGCGccc < 1:1360727/140‑1 (MQ=255) aGCGCTAAT‑‑ACCGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCTGCGCCCa < 1:7272981/140‑1 (MQ=255) | CCAGTTTGCGGGCGATTAAATTAGGGGCGATGTCATCGCCAATGCGAATATCGAGATCGACACCTTCATTGACCAAATCGACCAGTCGGTCTTCCACATCAAAACGTAATTCCAGTTGCGGATACGCCTTCGCCAGCACTAAT‑‑AACGCCGGAGCCACCACCTGTCGTCCAAAACCAAAGCTGCTGATAATACGCAGCATCCCCTGCGGCACCTGACGCACGTCAGAAAGTTCGTCCATCATCTGACCGACATCCTGCAAAATCCGCTGCGCCCA > NZ_CP025268/1886139‑1886412 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |