| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 2,869,477 | A→C | I128S (ATC→AGC) | rpoS ← | RNA polymerase sigma factor RpoS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 2,869,477 | 0 | A | C | 99.8% | 1827.7 / ‑4.5 | 520 | I128S (ATC→AGC) | rpoS | RNA polymerase sigma factor RpoS |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (268/251); total (269/251) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 | |||||||||||
Only 100 of 520 total aligned reads displayed.
CCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGC > NZ_CP025268/2869340‑2869613 | aTGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAg > 2:9346675/1‑140 (MQ=255) aTGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAg > 1:878974/1‑140 (MQ=255) aTGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAg > 2:3053871/1‑140 (MQ=255) tgAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAATCTTCTCTACCGCGCGGCCCAGCCCCAGGtt > 1:9085743/1‑140 (MQ=255) tgAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGtt > 2:571943/1‑140 (MQ=255) tgAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGtt > 1:8086323/1‑140 (MQ=255) tgAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGATCCGGGTCAAACTTCTCTACCGCGCGGCTCAGccccctgtc > 2:6023998/1‑135 (MQ=255) gAATCGGCAAACGAATAGTACGGGTTTGGGTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTg < 2:6120595/140‑1 (MQ=255) ctCGGCAAACGACTAGTACGGGTTGGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGcc < 1:7892032/139‑1 (MQ=255) aTCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGGTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGcc < 2:6581707/140‑1 (MQ=255) gtcAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCctc < 2:2023163/138‑1 (MQ=255) cAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCtt > 1:3171137/1‑140 (MQ=255) cAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGGTGCCctcgt > 1:6890389/1‑138 (MQ=255) cAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTGCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGCACCCACGTTCCGGGTCAAACTGCTCTAGCGCGCGGCTCAGCCCCAGGTTGCCCTCtt > 2:8459176/1‑140 (MQ=255) aCGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGa < 1:5019858/140‑1 (MQ=255) aCGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGa < 1:7613675/140‑1 (MQ=255) cGAATAGTACGGGTTTGGTTCATACTCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGAt < 1:176230/140‑1 (MQ=255) cGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGAt > 2:6933174/1‑140 (MQ=255) cGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGAt > 2:7846210/1‑140 (MQ=255) gAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATa < 1:9236213/140‑1 (MQ=255) gAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATa < 2:1679383/140‑1 (MQ=255) gAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATa < 1:1904703/140‑1 (MQ=255) gTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTc > 2:5282971/1‑140 (MQ=255) ggTTTGGTACATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCa > 2:561483/1‑140 (MQ=255) gTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCCGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCaa > 2:2748967/1‑140 (MQ=255) gTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTGCGATAAGGGCCAGCac > 1:8240812/1‑139 (MQ=255) tGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGc < 2:3104953/140‑1 (MQ=255) gTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCa > 2:7747032/1‑140 (MQ=255) gTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCa > 1:3927234/1‑140 (MQ=255) gTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCa > 2:4276100/1‑140 (MQ=255) gTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGGATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGGTGCCCTCTTCGATAAGGTCCAGCAACGCCa > 1:4821062/1‑140 (MQ=255) tAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGAccc > 2:641260/1‑139 (MQ=255) tAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCa > 1:1508777/1‑140 (MQ=255) tAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCa > 1:4067949/1‑140 (MQ=255) aTCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACg < 2:2162133/140‑1 (MQ=255) cGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGAt < 1:600679/140‑1 (MQ=255) cGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGAt < 1:2769766/140‑1 (MQ=255) gCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGAtt > 2:8789046/1‑140 (MQ=255) gCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGAtt > 1:8193897/1‑140 (MQ=255) cccGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTg > 2:1605141/1‑140 (MQ=255) cccGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTg > 1:4301631/1‑140 (MQ=255) cccGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTg > 1:5527401/1‑140 (MQ=255) cGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTGCGATAAGGTCCAGCACCGCCAGACCACGATTGcc > 1:6349882/1‑140 (MQ=255) gTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCa > 2:3209933/1‑140 (MQ=255) gTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCa > 2:2880844/1‑140 (MQ=255) tCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATa > 2:2586998/1‑140 (MQ=255) aTCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAAcg < 1:4442536/140‑1 (MQ=255) aTCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAAcg < 1:2948307/140‑1 (MQ=255) gTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAAcggcg > 1:7375991/1‑140 (MQ=255) cTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCggg < 2:4690559/140‑1 (MQ=255) cTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCggg < 2:887321/140‑1 (MQ=255) tGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTNCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGc > 1:6275327/1‑140 (MQ=255) ggCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCa < 1:3591695/140‑1 (MQ=255) gTTGCGTATGTTGAGCAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAg < 2:8245539/140‑1 (MQ=255) gTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAg < 1:713147/140‑1 (MQ=255) gTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAg < 1:6108561/140‑1 (MQ=255) ttGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGa > 2:3780146/1‑140 (MQ=255) tGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGAc > 2:5815721/1‑140 (MQ=255) tGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGAc < 1:7331005/140‑1 (MQ=255) gCGTATGTTGAGAAGCGGCAACCACGGTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACg < 1:6769287/140‑1 (MQ=255) gCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACg < 2:8593189/140‑1 (MQ=255) cGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGc > 1:2503998/1‑140 (MQ=255) cGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGc > 1:4711269/1‑140 (MQ=255) cGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGc > 1:6169224/1‑140 (MQ=255) cGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGc > 1:6550175/1‑140 (MQ=255) tATCTTGAGACGCGGACCCCACGTACCTCGTCAAACTTCTCTACCGCGCGGCACAGCCCCAGGTTGCCCACTACGATAAGGTCCAGCAACGCCAGACCACGATAGCCATAACGGCGGGCAATATTTACCACCAGACGCaa < 2:7661731/140‑1 (MQ=255) aTGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAg < 2:4133182/140‑1 (MQ=255) tGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGTCTGAGCCCCATGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGTCCACGATTGCCATAACGGCGGGCAATTTTTACAACCAGACGCAAGt < 2:5113667/140‑1 (MQ=255) tGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGt < 1:1347261/140‑1 (MQ=255) ttGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACg < 2:3459836/133‑1 (MQ=255) ttGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTa > 1:3066800/1‑140 (MQ=255) tGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTAc > 2:3318921/1‑140 (MQ=255) tGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTAc > 1:2028500/1‑140 (MQ=255) tGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTAc < 1:263079/140‑1 (MQ=255) aaGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCACCGCCAGACCACGATTGCCATCACGGCGGGCAATTTTTACCACCAGACGCAAGTTACtctc > 2:9097663/1‑140 (MQ=255) aaGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACtctc > 1:8677501/1‑140 (MQ=255) cGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTCCTCTCGag > 1:1052138/1‑139 (MQ=255) cGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGat > 1:3359230/1‑140 (MQ=255) cGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGat > 1:5605601/1‑140 (MQ=255) aaCCACGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGatcatc < 2:83054/140‑1 (MQ=255) cGTTCCGGGTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCcggcg > 1:2406522/1‑140 (MQ=255) gTCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAgg > 1:5742005/1‑140 (MQ=255) tCAAACTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTGTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGc < 2:3607587/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCACCGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 2:2416146/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 1:1272115/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 1:8946423/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 2:9265044/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 2:1274118/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 2:4507461/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 1:3739596/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 1:8603648/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGAAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 2:7444026/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGAGAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 2:5029665/140‑1 (MQ=255) aaaCTTCTCTACCGCGCGGCTCAGCCCCAGGTTGCCCACTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGa < 2:1175082/140‑1 (MQ=255) acgtctcTACCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACa < 2:7309393/137‑1 (MQ=255) ctctACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACAtctc > 1:4890722/1‑140 (MQ=255) aCCGCGCGGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACg < 2:6275327/140‑1 (MQ=255) gcgcgGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAg > 1:221639/1‑140 (MQ=255) cgcgGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGt > 2:8091982/1‑140 (MQ=255) cgGCTCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTgc > 2:7087188/1‑140 (MQ=255) | CCTTTACGATGTGAATCGGCAAACGAATAGTACGGGTTTGGTTCATAATCGCCCGTTCAATCGTCTGGCGAATCCACCAGGTTGCGTATGTTGAGAAGCGGAAACCACGTTCCGGGTCAAACTTCTCTACCGCGCGGATCAGCCCCAGGTTGCCCTCTTCGATAAGGTCCAGCAACGCCAGACCACGATTGCCATAACGGCGGGCAATTTTTACCACCAGACGCAAGTTACTCTCGATCATCCGGCGGCGAGAGGCGACATCTCCACGCAGTGC > NZ_CP025268/2869340‑2869613 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |