| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 4,641,859 | A→G | S119P (TCC→CCC) | arcA ← | two‑component system response regulator ArcA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 4,641,859 | 0 | A | G | 99.4% | 1858.7 / ‑1.6 | 540 | S119P (TCC→CCC) | arcA | two‑component system response regulator ArcA |
| Reads supporting (aligned to +/- strand): ref base A (0/3); new base G (328/209); total (328/212) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.00e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.64e-01 | |||||||||||
Only 100 of 542 total aligned reads displayed.
GCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACATTC > NZ_CP025268/4641722‑4641995 | gCTGCGCGGCAGCGTGTACTGCTCGCCCTCAGGGCCGCTCAACGAACGGCTGTTGAGGTCCAGTTCCCAACCCTTGAACTTGTAGCTTTCAACGCTACGACGGTGTTCGGTGACAGTACCCAGATGCGTGGTACGGGGCa > 2:9389897/1‑140 (MQ=255) gcgGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAgg > 2:2235979/1‑140 (MQ=255) gcgGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAgg > 1:2495647/1‑140 (MQ=255) gcgGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAAACGCTGTTGATGTCCAGTTCCCAAACATTGAACTTGTAGCTTTCAACGCAACGAAGTTCTTCGCAGACAGTACCCAGATTCATGGTACGGGGCAGTAgg > 1:3377488/1‑140 (MQ=255) gCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTg < 1:1300348/140‑1 (MQ=255) tACTGCTCGCCATCAGGGCCGATCAACGCACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACg < 2:6435132/140‑1 (MQ=255) tACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACg < 1:3453318/140‑1 (MQ=255) aCTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGa < 1:4494144/140‑1 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 1:100021/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 1:8748416/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 2:1211834/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 2:3746905/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 2:432330/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 2:5632244/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 1:2056699/1‑140 (MQ=255) cTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATAGAACTTGTAGCTATCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCg > 1:80150/1‑140 (MQ=255) tCGCCATCAGGGCCGATCTACGACCGGATGTTGATGTCCAGTTCCCAACCAAAGACCGTGTAGCTGTCAACGCTCCGACGTTATTCGCTGACAGGACCCAGATTCATGGAACGGGGCAGTAGGTTGCGTGCACGAAGCga > 2:8005219/1‑139 (MQ=255) tCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGt > 2:3121737/1‑140 (MQ=255) tCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGt < 1:5189589/140‑1 (MQ=255) gCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCa > 1:7804550/1‑140 (MQ=255) cgggCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCACCCATTGAACTTGTAGCTTTCCACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCAc < 2:9034306/139‑1 (MQ=255) gggCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCAcg > 2:3204075/1‑140 (MQ=255) ggCCGCTCAACGAACGGCTGTTGATGTCCAGTTCCCACCCCTTGAACGTGAAGCTGTCAACGCTACGACGGTCTTCGCGGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCTCGAATCGTCAGTTCAcgc < 2:5211640/140‑1 (MQ=255) ggCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCAcgc < 2:780886/140‑1 (MQ=255) ggCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCAcgc < 1:7223374/140‑1 (MQ=255) cGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCggg < 2:4591902/140‑1 (MQ=255) gATCAACGAACGGCTGTTGATGTCCAGTTCCCATCCATTGAACTTGTAGATATCAACGCTACGACGTTCTTCGATTAAAGTACCCAGATTCATGTTACGTGGCAGTAGGTTGCTGACAAGAATCGTCAGTTCACTCGGGt > 2:8211231/1‑140 (MQ=255) aTCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGtt > 1:6525495/1‑140 (MQ=255) tCAACGACCGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTg > 2:5261923/1‑140 (MQ=255) aacgaacgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGTGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGaa < 2:6122820/140‑1 (MQ=255) aacgaacgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGaa < 1:6174254/140‑1 (MQ=255) aacgaacgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGaa < 2:5881619/140‑1 (MQ=255) aacgaacgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGaa < 1:2179858/140‑1 (MQ=255) aacgaacgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGaa < 1:7049348/140‑1 (MQ=255) aacgaacgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGaa < 2:6305761/140‑1 (MQ=255) aacgaacgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGaa < 1:1823493/140‑1 (MQ=255) acgaacgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAAc < 1:5467693/140‑1 (MQ=255) acgGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGtt < 2:1981691/140‑1 (MQ=255) gCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTgg > 1:3231859/1‑140 (MQ=255) gCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTgg < 2:3520414/140‑1 (MQ=255) cTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTCCGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTTAACGGTTTGGt > 2:8956004/1‑140 (MQ=255) cTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGt > 2:7286491/1‑140 (MQ=255) tGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTgg > 1:365380/1‑138 (MQ=255) tGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTg < 2:7440719/140‑1 (MQ=255) tGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTg < 1:1148071/140‑1 (MQ=255) tGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGAGTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTg < 2:7148733/140‑1 (MQ=255) ttGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGAt > 1:7948406/1‑140 (MQ=255) tGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATg < 1:8410300/140‑1 (MQ=255) aTGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTa < 2:8842545/140‑1 (MQ=255) tCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTc < 1:2351218/140‑1 (MQ=255) cAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCAt < 2:9163316/140‑1 (MQ=255) cAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCAcc > 2:6804322/1‑140 (MQ=255) aaCCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCg > 1:6040235/1‑140 (MQ=255) ccATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGAt > 2:2711203/1‑140 (MQ=255) ttGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTc > 1:4700046/1‑140 (MQ=255) ttGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTc > 1:2702213/1‑140 (MQ=255) ttGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGcc < 1:3998979/140‑1 (MQ=255) gTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCga > 1:1669803/1‑140 (MQ=255) gTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCga > 2:7751042/1‑140 (MQ=255) gCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGaa > 1:7370307/1‑140 (MQ=255) ttCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAAttt > 1:7445912/1‑140 (MQ=255) tCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTA‑GTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTa > 1:5528011/1‑140 (MQ=255) cAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTa > 1:4209547/1‑140 (MQ=255) cAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTa > 2:8361251/1‑140 (MQ=255) cAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTa > 1:1546873/1‑140 (MQ=255) cTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGAc > 1:7634246/1‑140 (MQ=255) cgacgTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTc > 2:7552375/1‑140 (MQ=255) cgacgTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTc > 1:3059957/1‑140 (MQ=255) cgacgTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTc > 1:2951572/1‑140 (MQ=255) gaatttattcGCTGACAGTTCCAAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACTCGTGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCg < 2:4400597/133‑1 (MQ=255) tcttcGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTc > 2:3615927/1‑140 (MQ=255) cttcGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCa < 1:4336000/140‑1 (MQ=255) ttcGCTGACAGTACCCAGATTCATGGTANGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCAc < 1:6255795/140‑1 (MQ=255) tcGCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACg < 1:6747163/140‑1 (MQ=255) gCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGc < 1:7270906/140‑1 (MQ=255) gCTGACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGc < 1:6912091/140‑1 (MQ=255) gACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAg < 1:9082768/140‑1 (MQ=255) gACAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAg < 2:4796244/140‑1 (MQ=255) caCAGTACCCAGATTCATGGTACGGGGCAGGAGGTTGCGGGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCAACTGCACCGATTTCGAGTCCGAGAATTTTAGCGACTTCGTTGTCACGGCCAg < 2:445093/139‑1 (MQ=255) aCAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGt > 2:5710393/1‑140 (MQ=255) cAGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTc < 2:3027043/140‑1 (MQ=255) aGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCa > 1:756261/1‑140 (MQ=255) aGTACCCAGATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCa > 2:1629796/1‑140 (MQ=255) aGATTCATGGTTCGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTGGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGACTTTTATCGCCTTCGGTGTCACGGCCAGTCAGGAACAt < 2:6944340/140‑1 (MQ=255) gATTCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATc > 1:4765423/1‑140 (MQ=255) ttCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCaa > 2:3812127/1‑140 (MQ=255) ttCATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCaa > 2:2130257/1‑140 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAg > 2:7056904/1‑125 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACg > 2:8116104/1‑140 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACg > 2:8820344/1‑140 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACg > 1:5027541/1‑140 (MQ=255) cATGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACg < 2:5029270/140‑1 (MQ=255) tGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCTGAGAATTTTATCGACGTCGTTGTCACGGCCAGTCAGGAACATCAACGCa > 2:6493475/1‑140 (MQ=255) tGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCa > 2:1828699/1‑140 (MQ=255) tGGTACGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCa > 2:1378117/1‑140 (MQ=255) cGGGGCAGTAGTTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACAtt > 2:4065797/1‑140 (MQ=255) cGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACAtt > 1:959284/1‑140 (MQ=255) cGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACAtt > 1:938708/1‑140 (MQ=255) cGGGGCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACAtt > 2:2466262/1‑140 (MQ=255) ggggCAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACATTc > 2:3914583/1‑140 (MQ=255) | GCTGCGCGGCAGCTTGTACTGCTCGCCATCAGGGCCGATCAACGAACGGCTGTTGATGTCCAGTTCCCAACCATTGAACTTGTAGCTTTCAACGCTACGACGTTCTTCGCTGACAGTACCCAGATTCATGGTACGGGACAGTAGGTTGCGTGCACGAATCGTCAGTTCACGCGGGTTGAACGGTTTGGTGATGTAGTCATCTGCACCGATTTCGAGGCCGAGAATTTTATCGACTTCGTTGTCACGGCCAGTCAGGAACATCAACGCAACATTC > NZ_CP025268/4641722‑4641995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |