BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NZ_CP025268	674,649	+T	pseudogene (947/977 nt)	ybeQ ←	SEL1‑like repeat protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP025268	674,649	1	.	T	99.1%	2484.7 / 9.0	642	pseudogene (947/977 nt)	ybeQ	SEL1‑like repeat protein
Reads supporting (aligned to +/- strand): ref base . (5/1); new base T (289/344); total (294/348)
Fisher's exact test for biased strand distribution p-value = 9.96e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 665 total aligned reads displayed.

TGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTT‑C‑C‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGCGTCATTGCAT  >  NZ_CP025268/674510‑674780

  gTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑c‑ctg                                                                                                                                    <  1:5393619/140‑3 (MQ=255)

   tCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑c‑ctga                                                                                                                                   <  1:5895453/140‑4 (MQ=255)

     aTGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑c‑ctgact                                                                                                                                 <  1:8911285/140‑6 (MQ=255)

      tGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTg                                                                                                                                >  1:2628745/1‑140 (MQ=255)

        aCCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTgactgac                                                                                                                              >  1:6497763/1‑140 (MQ=255)

            gTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATAGGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACAtct                                                                                                                          <  1:1151306/140‑1 (MQ=255)

             ttCCAGAGACGCCCGTTTGAGCCGTAATAGTCTTATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACAtctc                                                                                                                         >  2:1989665/1‑140 (MQ=255)

                 agagACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCACTAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTAGTTTTTATCTCTACAGTAAATCTGCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTggg                                                                                                                     >  1:6994320/1‑139 (MQ=255)

                 agagACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGt                                                                                                                     >  1:5146796/1‑140 (MQ=255)

                     aCGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCg                                                                                                                 >  2:7716542/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTACTAGTCTGATTTCGCACAGCACGAAAGAGAATATGGGCCGAATGAAATGCCCCGGCGGTTGTGTTTATCTCTACAGTAAATCTTCCGTCTCACGAATGT‑C‑CTGACTGACATCTCTGGTTCCGGa                                                                                                               >  2:5358592/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCATTAAAGAGAATATGGGCCGAATGAACTTCCCCGGCGCGTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGATTTTAC‑T‑GACTGACATCTCTGGTTCCGGa                                                                                                               >  2:1508445/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGa                                                                                                               >  2:1617063/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGa                                                                                                               >  1:7967166/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGa                                                                                                               >  2:8988289/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGa                                                                                                               >  2:8883492/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGa                                                                                                               >  1:4407613/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGa                                                                                                               >  1:4689262/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCACGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGa                                                                                                               >  2:7436133/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAAGAAAGAGACTATGGGCCGCATGTAATTCCCCGGCCCTGGTTGGTATCTCTACAGTAACTCTTCAGTCTCACGAATGT‑C‑CTGACTGAGATCGCTGGGGCCGGa                                                                                                               >  2:7525578/1‑140 (MQ=255)

                       gCCCGTTTGAGCCGTAATAGTCTGAATTCGCACAGCAAAAAAGAGAAAATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTATACAGTAAATCTTCAGTCTCACGAATTT‑CAT‑GAATGACATCTCTGGTTCCGGa                                                                                                               >  2:7940828/1‑140 (MQ=255)

                        cccGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGAt                                                                                                              >  2:1888911/1‑140 (MQ=255)

                          cGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGa                                                                                                            <  2:7061856/140‑1 (MQ=255)

                               gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                       <  1:6873233/140‑1 (MQ=255)

                               gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                       <  2:297690/140‑1 (MQ=255)

                               gAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                       <  2:3503176/140‑1 (MQ=255)

                                 gCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACt                                                                                                     <  1:5640457/140‑1 (MQ=255)

                                    gTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTa                                                                                                  <  1:4567213/140‑1 (MQ=255)

                                    gTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTa                                                                                                  <  1:7514859/140‑1 (MQ=255)

                                       aTAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGa                                                                                               <  1:9013143/140‑1 (MQ=255)

                                         aGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATa                                                                                             <  2:2655566/140‑1 (MQ=255)

                                         aGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATa                                                                                             <  2:4249832/140‑1 (MQ=255)

                                         aGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATa                                                                                             <  2:6024604/140‑1 (MQ=255)

                                          gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATAc                                                                                            >  1:1428617/1‑140 (MQ=255)

                                           tCTGATTTCGCACAGCAATAAAGAGAATCTGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACa                                                                                           <  1:8132169/140‑1 (MQ=255)

                                           tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                       >  2:3701718/1‑128 (MQ=255)

                                           tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACa                                                                                           <  1:8575525/140‑1 (MQ=255)

                                           tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACa                                                                                           >  2:2308288/1‑140 (MQ=255)

                                               aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTc                                                                                       >  1:3654304/1‑140 (MQ=255)

                                                   cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCgaga                                                                                   >  2:4918071/1‑140 (MQ=255)

                                                    gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGagag                                                                                  >  1:1746799/1‑140 (MQ=255)

                                                     cacaGGAATCAAGGGAATTTGGGCCGAATGAAGTTCGCCGGCCCTGGTGTTTATCTCTACAGTAAATCTTCAGTCTCACGAAGTT‑C‑CTGACTGACTTCTCTGGTTCCGGATGACTGTACTTTACGATCCAGGTCGagagg                                                                                 >  2:8117907/1‑139 (MQ=255)

                                                     cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                                                 <  1:6418829/140‑1 (MQ=255)

                                                     cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGc                                                                                 <  1:5512782/140‑1 (MQ=255)

                                                            aTAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCgg                                                                          <  1:6589325/140‑1 (MQ=255)

                                                              aaaGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGgag                                                                        <  1:784599/140‑1 (MQ=255)

                                                                  agaATATGGGCCGGATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCg                                                                    >  1:9187021/1‑140 (MQ=255)

                                                                    aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAATTCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATAGAc                                                                  >  2:8330149/1‑140 (MQ=255)

                                                                    aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCTCGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGTTACAGGTCGAGAGCCAGTCGGAGATCGAc                                                                  >  2:8734869/1‑140 (MQ=255)

                                                                    aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTgactgac                                                                                                                              >  2:9620874/1‑80 (MQ=255)

                                                                    aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                                                  >  1:4301059/1‑140 (MQ=255)

                                                                    aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                                                  >  1:7757285/1‑140 (MQ=255)

                                                                    aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGAc                                                                  >  1:2493497/1‑140 (MQ=255)

                                                                    aaTATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGAAATCTCTGGTTCCGGATGACTGAACTTTACTATACAGGTCGATAGACTGTCGGAGATCGAc                                                                  >  2:6244446/1‑140 (MQ=255)

                                                                     atatGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGaa                                                                                                       <  1:1635620/102‑1 (MQ=255)

                                                                     atatGGGCCGAATGAAAGTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACa                                                                 <  2:7251510/140‑1 (MQ=255)

                                                                          ggCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTct                                                            <  1:4079148/140‑1 (MQ=255)

                                                                          ggCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTct                                                            <  1:4914905/140‑1 (MQ=255)

                                                                           gCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACa                                                                                           >  1:8681927/1‑108 (MQ=255)

                                                                            ccGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGTCAGGTcttc                                                          >  1:6099853/1‑140 (MQ=255)

                                                                            ccGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                                                          <  2:5758525/140‑1 (MQ=255)

                                                                            ccGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                                                          <  1:2931300/140‑1 (MQ=255)

                                                                            ccGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                                                          >  2:47616/1‑140 (MQ=255)

                                                                             cGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcc                                                         <  2:4471185/140‑1 (MQ=255)

                                                                              gAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcct                                                        >  2:1804607/1‑140 (MQ=255)

                                                                               aaTGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcctt                                                       >  1:6749136/1‑140 (MQ=255)

                                                                               aaTGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcctt                                                       <  1:9556149/140‑1 (MQ=255)

                                                                               aaTGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttcctt                                                       >  2:2446021/1‑140 (MQ=255)

                                                                                aTGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttccttc                                                      >  2:3260361/1‑140 (MQ=255)

                                                                                    aagtCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                                  <  1:9476326/137‑1 (MQ=255)

                                                                                    aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                                  <  2:6601323/140‑1 (MQ=255)

                                                                                    aaTTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCg                                                  <  1:100839/140‑1 (MQ=255)

                                                                                    aaTTCCCCGGCCCTTGTTTTTATCTCNACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGNTCTTCCTTCTCCg                                                  <  1:6259570/140‑1 (MQ=255)

                                                                                      ttCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTa                                                <  1:5805701/140‑1 (MQ=255)

                                                                                       tCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAg                                               <  2:9365365/140‑1 (MQ=255)

                                                                                         cccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGATTTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTg                                             >  2:6790623/1‑140 (MQ=255)

                                                                                          ccGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGa                                            <  1:7381681/140‑1 (MQ=255)

                                                                                           cGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGAt                                           <  2:1232293/140‑1 (MQ=255)

                                                                                           cGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGAt                                           <  1:2161444/140‑1 (MQ=255)

                                                                                           cGGCCCTTGTTTTTATCTCGACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGAt                                           <  1:7183021/140‑1 (MQ=255)

                                                                                              cccTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTcttc                                                          >  1:8832836/1‑122 (MQ=255)

                                                                                                    tttttATCTCTAAATTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATgg                                  <  2:1346922/140‑1 (MQ=255)

                                                                                                     ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc                                 <  1:8384878/140‑1 (MQ=255)

                                                                                                     ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc                                 <  1:76524/140‑1 (MQ=255)

                                                                                                     ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc                                 <  1:9314392/140‑1 (MQ=255)

                                                                                                     ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc                                 <  2:2119930/140‑1 (MQ=255)

                                                                                                     ttttATCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGc                                 <  2:5646442/140‑1 (MQ=255)

                                                                                                         aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg                             >  1:1860525/1‑140 (MQ=255)

                                                                                                         aTCTCTACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAgg                             <  1:2317789/140‑1 (MQ=255)

                                                                                                           ctctACAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGtt                           >  1:1301817/4‑140 (MQ=255)

                                                                                                                cAGTAAATCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATAcc                      >  1:2812022/1‑140 (MQ=255)

                                                                                                                    aaaTCTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGc                  <  1:3854865/140‑1 (MQ=255)

                                                                                                                        cTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTg              >  1:9726091/1‑140 (MQ=255)

                                                                                                                        cTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTg              >  1:1961679/1‑140 (MQ=255)

                                                                                                                        cTTCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTg              >  1:5724318/1‑140 (MQ=255)

                                                                                                                         ttCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTgg             <  1:5297349/140‑1 (MQ=255)

                                                                                                                          tCAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGc            >  1:3506790/1‑140 (MQ=255)

                                                                                                                           cAGTCTCACGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGCg           <  1:9850371/140‑1 (MQ=255)

                                                                                                                                  aCGAATTT‑C‑CTGACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGCGTCATTGc    >  1:4818726/1‑140 (MQ=255)

                                                                                                                                   cGAATTT‑C‑CTGACTGACATCTCTTGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGTCCAGGTTATACCAGGCAGTGGCGTCATTGCa   >  2:3913469/1‑140 (MQ=255)

TGGTCATGACCAGTTCCAGAGACGCCCGTTTGAGCCGTAATAGTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTTTACAGTAAATCTTCAGTCTCACGAATTT‑C‑C‑GACTGACATCTCTGGTTCCGGATGACTGAACTTTACGATACAGGTCGAGAGCCTGTCGGAGATCGACAGGTCTTCCTTCTCCGTAGTGATACATAATGGCCAGGTTATACCAGGCAGTGGCGTCATTGCAT  >  NZ_CP025268/674510‑674780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`