| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,075,379 | +G | intergenic (+21/+234) | ymdF → / ← rutG | general stress protein/pyrimidine utilization transport protein G |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,075,379 | 1 | . | G | 98.9% | 1622.4 / 7.1 | 469 | intergenic (+21/+234) | ymdF/rutG | general stress protein/pyrimidine utilization transport protein G |
| Reads supporting (aligned to +/- strand): ref base . (3/2); new base G (192/272); total (195/274) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 485 total aligned reads displayed.
CAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAACCGGGCTAATCAATG‑A‑CGAAT‑C‑A‑T‑TTTTG‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTG > NZ_CP025268/1075240‑1075510 | aaGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAAtgca < 1:769087/140‑4 (MQ=255) gCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAAtgcatt > 2:843487/1‑135 (MQ=255) gCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAAtgca > 1:6846910/1‑135 (MQ=255) aGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑t‑ttt > 1:6657605/1‑140 (MQ=255) ggTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCCGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑t‑tttt > 1:3655265/1‑140 (MQ=255) ggTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑t‑tttt < 1:5575467/140‑1 (MQ=255) ggTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑t‑tttt < 2:279637/140‑1 (MQ=255) aaaaGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTgtctg > 2:7744712/1‑136 (MQ=255) acagcacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTc > 2:2005282/1‑140 (MQ=255) agcacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCaa > 2:7439965/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCCGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCaaaa > 1:8197174/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCCGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCaaaa > 1:2429264/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCaaaa > 1:8112008/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCGGTAGCAGGGATAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTACTCAATG‑A‑CGACTGC‑A‑TGGTTGG‑CTGTAGCTCGGCaaaa > 2:2918889/1‑140 (MQ=255) agcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGc > 1:3149877/1‑140 (MQ=255) cGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCaaa > 2:5356698/1‑134 (MQ=255) cGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCaaa < 1:5356698/134‑1 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCAcc > 2:496285/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCAcc > 2:1230067/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:8955705/1‑140 (MQ=255) aGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAc > 1:7397082/1‑140 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CTAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc < 2:2160828/140‑1 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc < 1:5694908/140‑1 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc < 2:5209744/140‑1 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc < 2:2347742/140‑1 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc > 2:8177709/1‑140 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAATAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:7647814/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:5803556/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:7095411/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:9051218/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:1650973/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:3795557/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:9835426/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:2465981/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:7913465/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:5717180/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:379565/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:1770751/140‑1 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 2:5972247/1‑140 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 1:5060862/1‑140 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 2:3982715/1‑140 (MQ=255) gCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTg < 1:4591850/140‑1 (MQ=255) cAGCGCGCATCTGAAGCAGGTAACAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTCGCCGGGCTAATCAATG‑A‑CGAATGCTA‑T‑GTTGT‑CAGTAGCGCGTCAGAAAGCCAGCCCCGCCGGGTCCGCGGTGGTAGa > 2:7483389/1‑140 (MQ=255) gcgcgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATa < 1:6024670/140‑1 (MQ=255) gcgcgcATCAGAACCAGGTCACACAGGTGGGAAGCTCAGACACGGCAAAAGCGACAACTAGCCGGGCGACACACTGCAGCCACC‑C‑G‑T‑TTTGT‑CTGTAGCACGTCAACAACCCATCACCGCCGGTAACCCGGTGGTTGATa < 2:943920/140‑1 (MQ=255) cgcgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATAc > 1:143800/1‑140 (MQ=255) gcgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACt > 1:3486253/1‑140 (MQ=255) cgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtg > 1:3756011/1‑140 (MQ=255) tCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatga < 1:8542869/140‑1 (MQ=255) tCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatga < 1:9324189/140‑1 (MQ=255) tCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatga < 2:8096749/140‑1 (MQ=255) cTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGAc < 2:4435904/140‑1 (MQ=255) aGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAAt < 1:2611622/140‑1 (MQ=255) gCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATg < 1:3039943/140‑1 (MQ=255) aGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTa < 1:2879285/140‑1 (MQ=255) ggTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTaa > 1:4753565/1‑140 (MQ=255) gTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAg < 1:1908703/140‑1 (MQ=255) ggtggtAAGCGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTg < 1:2088367/140‑1 (MQ=255) ggtggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTg < 2:5571245/140‑1 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCAccgc > 1:6186887/1‑93 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCAccgc < 2:6186887/93‑1 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:6407034/1‑140 (MQ=255) ggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑ATT‑TTTTT‑CTGTAGCTCGTCAAAAAGCCATCACAGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATg > 1:48904/1‑140 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg > 2:2617951/1‑140 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:690643/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 2:3343456/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:4411805/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 2:6878852/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 2:655948/140‑1 (MQ=255) cgCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCGTGCCTGATGCGCGAt < 1:1001238/139‑1 (MQ=255) agCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGAt > 1:9642595/1‑140 (MQ=255) gCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATg > 2:7132559/1‑140 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTGTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa > 2:835843/1‑140 (MQ=255) cACGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTAt < 1:4045305/140‑1 (MQ=255) aCGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATc < 2:4183764/140‑1 (MQ=255) aCGGCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATc < 2:8592765/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAACAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 1:2279931/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 1:669293/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 2:9293031/140‑1 (MQ=255) aaaaGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGcc < 1:8422387/140‑1 (MQ=255) aaaGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTGTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACCAATGGAAGCTTGCCTGATGCGCGATGCTTATCAGGCCt > 2:1893910/1‑140 (MQ=255) aGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAACTGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTAc > 2:3184740/1‑140 (MQ=255) aGCGACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTAc > 2:1504406/1‑140 (MQ=255) gACAACTAGCCGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCag < 2:7316582/140‑1 (MQ=255) tagccGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGAtt < 2:6751260/137‑1 (MQ=255) gccGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGc > 1:6529895/2‑140 (MQ=255) gccGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGc > 1:5823204/2‑140 (MQ=255) ccGGGCTAATCAATG‑C‑CGAATGC‑A‑T‑TTTTGTCTGGAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:9205387/140‑1 (MQ=255) ccGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 1:9096175/140‑1 (MQ=255) ccGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 1:81722/140‑1 (MQ=255) ccGGGCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:4644324/140‑1 (MQ=255) ggCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGc < 1:7957456/136‑1 (MQ=255) ggCTAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAata > 1:3434595/1‑140 (MQ=255) tAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 2:3486253/140‑1 (MQ=255) tAATCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 2:3621992/140‑1 (MQ=255) aTCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTg < 2:811980/140‑1 (MQ=255) tCAATG‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGa < 1:1254830/140‑1 (MQ=255) g‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTg < 1:7229524/140‑1 (MQ=255) g‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTg < 1:8607348/140‑1 (MQ=255) g‑A‑CGAATGC‑A‑T‑TTTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTg > 1:1502544/1‑140 (MQ=255) | CAGAAGCAGGTAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAACCGGGCTAATCAATG‑A‑CGAAT‑C‑A‑T‑TTTTG‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTG > NZ_CP025268/1075240‑1075510 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |