| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,075,387 | +T | intergenic (+29/+226) | ymdF → / ← rutG | general stress protein/pyrimidine utilization transport protein G |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,075,387 | 1 | . | T | 99.0% | 1894.2 / 6.8 | 490 | intergenic (+29/+226) | ymdF/rutG | general stress protein/pyrimidine utilization transport protein G |
| Reads supporting (aligned to +/- strand): ref base . (4/1); new base T (188/295); total (193/297) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.10e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 498 total aligned reads displayed.
TAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAACCGGGCTAATCAATGACGAAT‑CATT‑TTTG‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTG > NZ_CP025268/1075250‑1075520 | aaaaGGTGGACAGCACCGCGGGGGTACTTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTCAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTgtctg > 2:7744616/1‑136 (MQ=255) tGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTc < 2:1995253/140‑1 (MQ=255) agcacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCaa > 2:7439965/1‑140 (MQ=255) cacagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGGGCAGTCGCGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCaaaa > 1:8112295/1‑140 (MQ=255) cagcGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAg > 1:4903425/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCAcc > 1:3816427/1‑140 (MQ=255) gTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCAcc > 2:1230067/1‑140 (MQ=255) aTTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCAccgcc > 1:5353959/1‑140 (MQ=255) aGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAc > 1:7397082/1‑140 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACTAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc < 2:2160828/140‑1 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc > 2:8177709/1‑140 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc < 1:5694908/140‑1 (MQ=255) gAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTAcc < 2:2347742/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAATAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:7647814/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:2465981/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:351716/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:3721737/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:5313791/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 2:7095411/140‑1 (MQ=255) aTGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCg < 1:9835426/140‑1 (MQ=255) tGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCgg > 1:3674057/1‑140 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAATTGGGGGTAAGAGCAGTCACGGCAATAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATTGTTGG‑CTGGAGCTCGTCCAAAAGCCAGCACCGCCGGTTACCCggtg > 2:9168126/1‑140 (MQ=255) aCCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCggtg > 1:5060862/1‑140 (MQ=255) gCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTg < 1:5426864/140‑1 (MQ=255) gCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTg < 1:4591850/140‑1 (MQ=255) gcgcATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACt > 1:3486253/1‑140 (MQ=255) cATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgat < 2:2833138/140‑1 (MQ=255) aTCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatg > 1:3357508/1‑140 (MQ=255) aTCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatg < 1:9330115/140‑1 (MQ=255) tCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACtgatga < 1:8542869/140‑1 (MQ=255) cTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGAc < 1:1207398/140‑1 (MQ=255) cTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGAc > 2:3200965/1‑140 (MQ=255) aGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAAt < 1:9137795/140‑1 (MQ=255) gCAGGTACAAAAGGTGGTAAGAGCAGTCACGGCAATAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATg > 1:2515382/1‑140 (MQ=255) ggTAATAAAGGTGGTAAGAGCAGTCACGGCAATAGGGAGAACTAGCCGGGGTAATCCATGACGATTGCCTT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTaa > 2:4254953/1‑140 (MQ=255) ggTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTaa > 1:4753643/1‑140 (MQ=255) ggTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTaa > 2:6023062/1‑140 (MQ=255) ggTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTaa > 1:2787218/1‑140 (MQ=255) ggTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTaa > 1:6663834/1‑140 (MQ=255) aaaaGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTg > 1:7655685/1‑140 (MQ=255) aaaaGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTg > 1:6795252/1‑140 (MQ=255) gtggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGa < 2:5823720/140‑1 (MQ=255) tggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGAt > 1:3773114/1‑140 (MQ=255) ggtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTg > 1:1478061/1‑109 (MQ=255) gtAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCACAAAGCCATCACCGCCGGTTACCCGGTGGTTGTTACTGATGACAAATGTAAGCTTGCCTGATgc > 2:17312/1‑140 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACTAATGTAAGCTTGCCTGATgcg < 2:1813349/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 2:6878852/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 2:655948/140‑1 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg > 2:2617951/1‑140 (MQ=255) tAAGAGCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATgcg < 1:443334/140‑1 (MQ=255) gagCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGa < 2:5496474/140‑1 (MQ=255) cgCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCGTGCCTGATGCGCGAt < 1:1001238/139‑1 (MQ=255) agCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGAt > 1:9642595/1‑140 (MQ=255) agCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGAt < 1:6047093/140‑1 (MQ=255) gCAGTCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATg > 2:7132559/1‑140 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa < 2:9241157/140‑1 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa > 2:5057276/1‑140 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa > 1:6906657/1‑140 (MQ=255) tCACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TGTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTa > 2:835843/1‑140 (MQ=255) cACGGCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTAt < 1:4073304/140‑1 (MQ=255) aCGGCAAAAGCGTCAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATc < 2:4772545/140‑1 (MQ=255) gCAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAgg < 1:7970635/140‑1 (MQ=255) cAAAAGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGc < 1:2900996/140‑1 (MQ=255) aaaaGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGcc < 1:8422387/140‑1 (MQ=255) aGCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTAc > 1:6198936/1‑140 (MQ=255) gCGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTAcc < 2:3357508/140‑1 (MQ=255) cGACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCa < 1:1963321/140‑1 (MQ=255) gACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCag < 1:1627711/140‑1 (MQ=255) gACAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCag < 2:7316582/140‑1 (MQ=255) aCAACTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCaga > 2:5705918/1‑140 (MQ=255) aCTAGCCGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAATAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCagaaga < 2:8558599/140‑1 (MQ=255) gccGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGc > 1:5823373/2‑140 (MQ=255) ccGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:4025570/140‑1 (MQ=255) ccGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 1:308263/140‑1 (MQ=255) ccGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCa < 2:3828994/140‑1 (MQ=255) cGGGCTAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCaa > 1:2372981/1‑140 (MQ=255) tAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 2:4500514/140‑1 (MQ=255) tAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 2:3149877/140‑1 (MQ=255) tAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 1:817849/140‑1 (MQ=255) tAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 2:8881477/140‑1 (MQ=255) tAATCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAatatat < 2:9427788/140‑1 (MQ=255) aTCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTg < 2:811980/140‑1 (MQ=255) tCAATGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGa > 1:8994422/1‑140 (MQ=255) tGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAAttt > 1:1325502/1‑140 (MQ=255) tGACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAAttt > 1:8208646/1‑140 (MQ=255) gACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTg < 1:8607348/140‑1 (MQ=255) gACGAATGCATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTg < 1:7229524/140‑1 (MQ=255) gACGAATGCATT‑TTTGTCTGAAGCACGTCAAAAAGCCATCACCGCCTGATACCCGGTGGATGATACTTATGACAAATGAAAGCTTGCCAGATGCGCGATGCTTATCATGCCTACCAGAATATTGCAATAAATTCaaaatt > 2:7922620/1‑136 (MQ=255) cgaatgcATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCa < 2:1440768/134‑1 (MQ=255) cgaatgcATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCa < 1:6553230/134‑1 (MQ=255) cgaatgcATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCATACCAGAAGATTGCAATATATTGAATTTGCa < 1:2076834/134‑1 (MQ=38) gaatgcATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCAc < 1:2199502/135‑1 (MQ=255) gaatgcATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCAc < 1:5748360/135‑1 (MQ=255) aatgcATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACt > 2:9749907/5‑140 (MQ=255) aatgcATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACt > 2:785170/5‑140 (MQ=255) aatgcATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACt < 1:1780571/136‑1 (MQ=255) aatgcATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGGTGATACTGATGACAAATGTAAGCGTGCCTGATGCGCGATGCTTATCAGGCCTACCAGACGATTGCAATATATTGAATTTGCACt > 2:6192851/5‑140 (MQ=38) atgcATT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTg < 1:6443222/137‑1 (MQ=255) aTT‑TTTGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGtttt > 2:7466097/1‑140 (MQ=255) tt‑tttGTCTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTg < 2:6626216/140‑1 (MQ=255) | TAAAAAAGGTGGACAGCACAGCGGGGGTAATTTCAAGAATGACCCGCAGCGCGCATCTGAAGCAGGTAAAAAAGGTGGTAAGAGCAGTCACGGCAAAAGCGACAACTAACCGGGCTAATCAATGACGAAT‑CATT‑TTTG‑CTGTAGCTCGTCAAAAAGCCATCACCGCCGGTTACCCGGTGGTTGATACTGATGACAAATGTAAGCTTGCCTGATGCGCGATGCTTATCAGGCCTACCAGAAGATTGCAATATATTGAATTTGCACTGTTTTG > NZ_CP025268/1075250‑1075520 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |