| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP025268 | 1,374,862 | (T)8→9 | intergenic (+40/‑172) | pspE → / → ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP025268 | 1,374,854 | 1 | . | T | 93.7% | 1678.1 / 103.9 | 548 | intergenic (+32/‑180) | pspE/ycjM | thiosulfate sulfurtransferase PspE/glucosylglycerate phosphorylase |
| Reads supporting (aligned to +/- strand): ref base . (19/15); new base T (279/226); total (299/249) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.10e-01 | |||||||||||
Only 100 of 580 total aligned reads displayed.
GACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGC > NZ_CP025268/1374716‑1374988 | gACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑t > 1:5423422/1‑140 (MQ=255)gACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑t > 1:3731148/1‑140 (MQ=255)gACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑t > 1:3119410/1‑140 (MQ=255) gTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCGAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑tt‑tttttt < 1:8488996/140‑1 (MQ=255) tCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑tt‑ttttttt < 2:9464929/140‑2 (MQ=255) ggCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑tt‑tttttttctgt < 2:3193677/140‑6 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTca < 2:9408147/140‑1 (MQ=255) caagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTca < 1:8263016/140‑1 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAACGACATCGCACTGCCGAAGGTCACAGGTTAAATGACGTGCCCATGAGCGGCGCTTATGCGCCGG‑‑TT‑TTTTTTCTGTgac > 2:751303/1‑140 (MQ=255) aagcaaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTcac < 1:1991654/140‑1 (MQ=255) aagcaaAAGAGATCCTGAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTcac < 2:8739607/140‑1 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACAcc < 1:6349709/140‑1 (MQ=255) caaAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACAcc < 2:6067448/140‑1 (MQ=255) agagATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTCAAAGAATTCACCATGAGCGGCGCTAATGCGCCGG‑‑TT‑TTGTATCTGTCACACCTTAt > 2:2624865/1‑140 (MQ=255) agagATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTGACACCTTAt > 2:4226097/1‑140 (MQ=255) gagaTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTAtt < 2:2129400/140‑1 (MQ=255) gagaTCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTAtt < 2:5300434/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACCTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCGTAGGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACa < 2:3947579/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTcac > 2:2536721/1‑128 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACa < 1:1065218/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACa < 1:7464238/140‑1 (MQ=255) tCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTGATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACa > 1:9347295/1‑140 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTCTGCGCC‑GT‑TT‑TTTTTTCTGTCACACCGTATTTACAt > 1:1908240/1‑140 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTAc > 1:6490942/1‑138 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACAt < 1:693010/140‑1 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACAt > 2:9711554/1‑140 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCGGTCACACCTTATTTACAt > 2:1353357/1‑140 (MQ=255) ccTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTGATGCGCC‑GT‑TT‑TTTTTTATGTCACACCGTATTTACAt > 1:4554161/1‑140 (MQ=255) cattAGCGAGATGTGATATAACCACGTTGAGAACGCCGGTGGCCTTAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATTAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACAt < 2:1243283/138‑1 (MQ=255) cTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATc < 1:7237481/140‑1 (MQ=255) aGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATcccc > 2:5456503/1‑140 (MQ=255) cGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCAt > 2:1753028/1‑140 (MQ=255) gagaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATa < 2:66918/140‑1 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGa < 1:944180/140‑1 (MQ=255) gaTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGa < 2:6575357/140‑1 (MQ=255) aTGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGat > 1:5197059/1‑140 (MQ=255) ggATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGattat > 2:2784578/1‑140 (MQ=255) aCCCACGTTGTGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGt < 2:5129181/140‑1 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGATGGTCAAAGGTTACAAGAATTCACCAGGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGGGACACCTTATTTCCATCCCCATAGATTATTTGCGt > 2:8487371/1‑140 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGt > 2:9117405/1‑140 (MQ=255) aCCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCGTATTTACATCCCCCAAGATTATTTGCGt > 1:4218655/1‑140 (MQ=255) cccACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTc > 2:7796730/1‑140 (MQ=255) aCGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTTCATCCCCCTAGATTATTTTCGTCAGc > 1:4641265/1‑140 (MQ=255) aCGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGc > 2:483047/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GTTTT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGc > 1:3964801/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 2:6316886/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 1:2554531/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 2:7015931/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt > 2:7917864/1‑140 (MQ=255) cGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCt < 1:1297551/140‑1 (MQ=255) gagaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACCCCTTATTTACATCCCCATCGATTATTTGCGTCAGCTcaca > 2:378747/1‑140 (MQ=255) agaACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTAAATCCCCATAGATTATTTTCGTCAGCTCACa‑a > 1:267005/1‑140 (MQ=255) aaCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GTTTT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACa‑aa > 2:4087494/1‑140 (MQ=255) aaCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AAt < 1:5355674/140‑1 (MQ=255) aaCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACAACTTATTTACATCCCCCTAGATTATTTGCGTCAGCTCACA‑AAt > 1:299695/1‑140 (MQ=255) aCGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATa < 1:7580691/140‑1 (MQ=255) cGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATAc < 2:5650309/140‑1 (MQ=255) cGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATAc > 1:8894631/1‑140 (MQ=255) gCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTGTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGGTCACa‑atttcg > 2:4921870/1‑135 (MQ=255) tGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCCTAGATTATTTGCGTCAGCTCACA‑AATACGCtttt > 1:4964255/1‑140 (MQ=255) gCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAATAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACGCCTGAGTTACATCCCCATAGATTTTTTGCGTGCGCTGAAC‑AATTCGCTTGTTc > 1:1639931/1‑140 (MQ=255) tGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCt > 2:8119542/1‑140 (MQ=255) aaaGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCCGCTCACA‑AATACGCTTTTTCCCTgg > 1:7854986/1‑140 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTGTGTCACACCATATTTACATCCCCCAAGATTATTTGCGTCAGCGCACA‑AATAAGCTTTTTACCGGGTaaaaa > 1:3575955/1‑140 (MQ=255) aTCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATACCCATAGATTATTTGCGTCAGCTCACA‑AAAAAGCTTTTTAACGGGTataaa > 1:9064363/1‑140 (MQ=255) cGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAAt > 2:8891937/1‑140 (MQ=255) cGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAAt < 2:301623/140‑1 (MQ=255) cAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCGTATTTACATCCCCATACATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCAGGTAAAAAAtta > 1:5924137/1‑138 (MQ=255) aGGTCATAGGTTAAAACACTTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 2:6930160/140‑1 (MQ=255) aGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 1:1769868/140‑1 (MQ=255) aGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 1:2393704/140‑1 (MQ=255) aGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGAGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCg < 1:6798505/140‑1 (MQ=255) ggTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGt > 2:4568004/1‑140 (MQ=255) gTCAAAGGTTAAAAGACTTCACCATGAGCGGCGCTTCTGCGCC‑GT‑TT‑TTTTTTATGTCACACCGTTTTTACCTCCCCATAGATTATTTGCGTCAACTCACA‑AATACGCATTTTCCCTGGTAAAAAATGATTTCCTGCGTg > 2:1092484/1‑140 (MQ=255) gTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTCTGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCAAA‑AATAAGCTTTTTCCCTGGTAAAAAATGATGTCCTGAGTg > 2:9511890/1‑140 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACC‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGAcga > 1:8612148/1‑138 (MQ=255) aaGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTa > 2:3525694/1‑140 (MQ=255) tAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTTTCACACCATATTTAAATCCCCATAGATTATTTTCGTCAGCTCAAA‑AATACGCTTTTTACCTGGTAAAAAAATATTTACAGCGTGACTaaaaac > 1:2479235/1‑138 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTTCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAAccc > 1:615180/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAAccc > 2:1968770/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTAAATCCCCAAAGATTATTTGCGTCAGCGCACA‑AAAAACCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGGAGAAAAccc > 1:9145828/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTATTTCCCACCGTATTTACAAACCCAAAGATTTTTTTCGTCAGCTCACA‑AAAAACCTTTTTGCCAGGGAAAAAAATATTTACAGCGTGGCGAAAAacc > 1:4355794/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTATTTAACACCATATTTAAAAACCCAAAAATTATTTTCGGAATCGAACA‑AATAAGCGTTTTCCCTGGTAAAAAATTATTTAATGCGGGTCGAAAAccc > 1:8120849/1‑140 (MQ=255) aaaaGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTATGTGACACCAGATTTTCATACCCCAAGATTATTTTGGTCAGCGGACA‑AATACGCTTTTTACCAGGTAAAAAATGATTTCCTGCGTGGCTAAAAccc > 1:2207340/1‑140 (MQ=255) aaGAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCtt < 1:66221/140‑1 (MQ=255) gAATTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTtgt < 2:4303676/140‑1 (MQ=255) aaTTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTATGTAACAACTTATTTACATACCCATAAATTATTTGAGGCACCGCAAA‑AATAACCTTTTTACCTGGTAAAAAATTTTTTACTGCGTGACTAAAAaccagttg > 1:7410063/1‑135 (MQ=255) aTTCACCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGc < 1:9626678/140‑1 (MQ=255) aCCATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCAGAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTACTGCGTGACTAAAACCCTtgtgagcaa > 2:9613599/1‑135 (MQ=255) ccATGAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAAt < 1:3302851/140‑1 (MQ=255) agtcccgcgcTTAAGCGCC‑GTTTT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTg < 2:8230805/134‑1 (MQ=255) gAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGAc < 1:9787984/140‑1 (MQ=255) gAGCGGCGCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCCTTTTTTAAACCCCCTAGATTATTTGCGTCAGGT‑ACACAATACGCATTTTACCAGGTAAAAAATTGATTCCATCGTGTCTAAAACCCGTGTGCGCaaagtaa > 2:6394521/1‑135 (MQ=255) gcggcgCTTATGCGCC‑G‑‑TTATTTTTTCTGTCACACCTTATTTCCATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAg < 2:2218122/140‑1 (MQ=255) cggcgCTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AAAACGCTTTTTCCCTGGTAAAAAATTATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGt > 2:729741/1‑140 (MQ=255) cctATGCGCC‑GA‑TA‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGAGTATTTGCGTCAGCTCACA‑AAGACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACCGTTTAtt < 2:7393824/138‑1 (MQ=255) cTTATGCGCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTAtt < 2:4639970/140‑1 (MQ=255) tATGCTCC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCAATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTAtttt < 2:5552024/140‑1 (MQ=255) gcgcC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTg < 1:1506030/140‑1 (MQ=255) gcgcC‑GT‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTg < 2:1514756/140‑1 (MQ=255) | GACGCCAGTCAGGGCAAGCAAAAGAGATCCTTAGCGAGATGGGATATACCCACGTTGAGAACGCCGGTGGCCTGAAAGACATCGCAATGCCGAAGGTCAAAGGTTAAAAGAATTCACCATGAGCGGCGCTTATGCGCC‑G‑‑TT‑TTTTTTCTGTCACACCTTATTTACATCCCCATAGATTATTTGCGTCAGCTCACA‑AATACGCTTTTTCCCTGGTAAAAAATGATTTCCTGCGTGACTAAAACCCTTGTGCTCAATTGACAGTTTATTTTCTGC > NZ_CP025268/1374716‑1374988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |